Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0251.Seq
         (797 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g15940.1 68417.m02420 fumarylacetoacetate hydrolase family pr...    32   0.38 
At3g16700.1 68416.m02133 fumarylacetoacetate hydrolase family pr...    30   1.5  
At5g15510.1 68418.m01816 expressed protein                             29   3.6  

>At4g15940.1 68417.m02420 fumarylacetoacetate hydrolase family
           protein contains Pfam domain, PF01557:
           fumarylacetoacetate hydrolase family protein
          Length = 222

 Score = 32.3 bits (70), Expect = 0.38
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +3

Query: 354 KILCIGLNYKDHCQEQNLTPPPVPMVFSKFSSTII 458
           KI+C+G NY  H +E     P  P++F K +S+ +
Sbjct: 15  KIVCVGRNYAAHAKELGNAVPKEPVIFLKPTSSYL 49


>At3g16700.1 68416.m02133 fumarylacetoacetate hydrolase family
           protein contains Pfam domain, PF01557:
           fumarylacetoacetate hydrolase family protein
          Length = 224

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +3

Query: 354 KILCIGLNYKDHCQEQNLTPPPVPMVFSKFSSTII 458
           KI+ +GLNY  H +E     P  P+VF K +S+ +
Sbjct: 15  KIVGVGLNYASHAKELGNALPKDPIVFLKPTSSYL 49


>At5g15510.1 68418.m01816 expressed protein
          Length = 497

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 14/49 (28%), Positives = 28/49 (57%)
 Frame = +1

Query: 46  ILSKSVNXIDXFLNTIRCFSVTKTRNMKLVQFSYKDSPKNIRVGYLEGD 192
           +  K +N ++ F   + CFS +KT N      + +D+ K +++ +LEG+
Sbjct: 195 VSGKVMNLVEAF-EKLTCFSNSKTANKIEENQTEEDTKKPVKLEFLEGE 242


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,171,973
Number of Sequences: 28952
Number of extensions: 292248
Number of successful extensions: 718
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 673
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 713
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1804564000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)