Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0250.Seq
         (797 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_44095| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.3  
SB_304| Best HMM Match : UPF0154 (HMM E-Value=0.32)                    29   5.8  
SB_30167| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.8  
SB_32874| Best HMM Match : Penaeidin (HMM E-Value=4.9)                 28   7.6  
SB_29973| Best HMM Match : RVT_1 (HMM E-Value=5.2e-21)                 28   7.6  
SB_42560| Best HMM Match : ig (HMM E-Value=2.4e-06)                    28   7.6  
SB_17745| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.6  

>SB_44095| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3051

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 435  STWPNTLWPGRTWRGSRIVIL 497
            S WP +LWP   WR S  ++L
Sbjct: 1659 SLWPRSLWPRSLWRWSLCLVL 1679


>SB_304| Best HMM Match : UPF0154 (HMM E-Value=0.32)
          Length = 701

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = +3

Query: 105 IPGLLKVGDKIEIGGKIKEN-ARKMSVNLCAQEGEEPRDV 221
           +PG LKVG  + I G+        +  NL A  G +PR V
Sbjct: 379 VPGSLKVGFNLSISGQANNTVVNNVGRNLGALRGRQPRPV 418


>SB_30167| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 81

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +1

Query: 304 LRHQLQHVCSWHDISDSLRNQGHGRHHDILPGEVSFELPPED 429
           LRH  +++   HDI+D L++  HGR   I   E   +LP  +
Sbjct: 39  LRHMGENIPE-HDINDILKDASHGRKRKITFEETIDKLPESE 79


>SB_32874| Best HMM Match : Penaeidin (HMM E-Value=4.9)
          Length = 192

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -2

Query: 793 PRSWLKTFRGXSVKKKPGSGPLPGRFFKPLQF 698
           PR   +      +KK PG  P+P R +K   F
Sbjct: 19  PRLVYQALNNIQIKKSPGPDPVPNRIWKEFAF 50


>SB_29973| Best HMM Match : RVT_1 (HMM E-Value=5.2e-21)
          Length = 499

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -2

Query: 793 PRSWLKTFRGXSVKKKPGSGPLPGRFFKPLQF 698
           PR   +      +KK PG  P+P R +K   F
Sbjct: 73  PRLVYQALNNIQIKKSPGPDPVPNRIWKEFAF 104


>SB_42560| Best HMM Match : ig (HMM E-Value=2.4e-06)
          Length = 360

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +2

Query: 83  NAGFHRQHTGITKSWRQNRDRWQ-NQGECKKDVREPLRSRRRGAEGCGSPLRRE 241
           N G H +H G       N+   + NQGE  K   +P + + +  + CG P + E
Sbjct: 190 NQGEHNKHCGKPNQGEHNKHCGKPNQGEHNKHCGKPNQDQGQHNKHCGKPNQGE 243


>SB_17745| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 567

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -2

Query: 793 PRSWLKTFRGXSVKKKPGSGPLPGRFFKPLQF 698
           PR   +      +KK PG  P+P R +K   F
Sbjct: 493 PRLVYQALNNIQIKKSPGPDPVPNRIWKEFAF 524


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,278,795
Number of Sequences: 59808
Number of extensions: 589379
Number of successful extensions: 1606
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1605
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2203769656
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)