Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0250.Seq
         (797 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y09765-1|CAA70904.1|  506|Homo sapiens GABA receptor epsilon sub...    33   1.2  
Y09763-1|CAA70903.1|  506|Homo sapiens GABRE protein.                  33   1.2  
Y07637-1|CAA68914.1|  505|Homo sapiens putative GABA-gated chlor...    33   1.2  
U92283-1|AAB94645.1|  506|Homo sapiens GABA-A receptor epsilon s...    33   1.2  
U66661-1|AAB49284.1|  506|Homo sapiens GABA-A receptor epsilon s...    33   1.2  
BC109280-1|AAI09281.2|  970|Homo sapiens DNAJC6 protein protein.       30   8.4  
BC109279-1|AAI09280.2|  970|Homo sapiens DNAJC6 protein protein.       30   8.4  
BC051722-1|AAH51722.1|  442|Homo sapiens DNAJC6 protein protein.       30   8.4  
AL355487-2|CAI23548.1|  970|Homo sapiens DnaJ (Hsp40) homolog, s...    30   8.4  
AL355487-1|CAI23547.1|  913|Homo sapiens DnaJ (Hsp40) homolog, s...    30   8.4  
AL139294-3|CAI18999.1|  970|Homo sapiens DnaJ (Hsp40) homolog, s...    30   8.4  
AL139294-1|CAI18997.1|  913|Homo sapiens DnaJ (Hsp40) homolog, s...    30   8.4  
AB007942-1|BAA32318.2|  937|Homo sapiens KIAA0473 protein protein.     30   8.4  

>Y09765-1|CAA70904.1|  506|Homo sapiens GABA receptor epsilon
           subunit protein.
          Length = 506

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 14/48 (29%), Positives = 21/48 (43%)
 Frame = -1

Query: 440 C*VVSSGGSSNETSPGSIS**RPCP*FRRLSEISCQEQTCCSWCRNFR 297
           C +V++ GS  E  P   +   P P         C +  CC WC+ F+
Sbjct: 407 CQIVTTEGSDGEERPSCSAQQPPSPGSPEGPRSLCSKLACCEWCKRFK 454


>Y09763-1|CAA70903.1|  506|Homo sapiens GABRE protein.
          Length = 506

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 14/48 (29%), Positives = 21/48 (43%)
 Frame = -1

Query: 440 C*VVSSGGSSNETSPGSIS**RPCP*FRRLSEISCQEQTCCSWCRNFR 297
           C +V++ GS  E  P   +   P P         C +  CC WC+ F+
Sbjct: 407 CQIVTTEGSDGEERPSCSAQQPPSPGSPEGPRSLCSKLACCEWCKRFK 454


>Y07637-1|CAA68914.1|  505|Homo sapiens putative GABA-gated chloride
           channel protein.
          Length = 505

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 14/48 (29%), Positives = 21/48 (43%)
 Frame = -1

Query: 440 C*VVSSGGSSNETSPGSIS**RPCP*FRRLSEISCQEQTCCSWCRNFR 297
           C +V++ GS  E  P   +   P P         C +  CC WC+ F+
Sbjct: 406 CQIVTTEGSDGEERPSCSAQQPPSPGSPEGPRSLCSKLACCEWCKRFK 453


>U92283-1|AAB94645.1|  506|Homo sapiens GABA-A receptor epsilon
           subunit protein.
          Length = 506

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 14/48 (29%), Positives = 21/48 (43%)
 Frame = -1

Query: 440 C*VVSSGGSSNETSPGSIS**RPCP*FRRLSEISCQEQTCCSWCRNFR 297
           C +V++ GS  E  P   +   P P         C +  CC WC+ F+
Sbjct: 407 CQIVTTEGSDGEERPSCSAQQPPSPGSPEGPRSLCSKLACCEWCKRFK 454


>U66661-1|AAB49284.1|  506|Homo sapiens GABA-A receptor epsilon
           subunit protein.
          Length = 506

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 14/48 (29%), Positives = 21/48 (43%)
 Frame = -1

Query: 440 C*VVSSGGSSNETSPGSIS**RPCP*FRRLSEISCQEQTCCSWCRNFR 297
           C +V++ GS  E  P   +   P P         C +  CC WC+ F+
Sbjct: 407 CQIVTTEGSDGEERPSCSAQQPPSPGSPEGPRSLCSKLACCEWCKRFK 454


>BC109280-1|AAI09281.2|  970|Homo sapiens DNAJC6 protein protein.
          Length = 970

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +1

Query: 319 QHVCSWHDISDSLRNQGHGRHHDILP--GEVSFELPPEDTTQHGQ 447
           +H C+  D++ S+    H  H D L   G+   ++PP++   +GQ
Sbjct: 436 EHYCT-KDVNPSILFSSHQEHQDTLALGGQAPIDIPPDNPRHYGQ 479


>BC109279-1|AAI09280.2|  970|Homo sapiens DNAJC6 protein protein.
          Length = 970

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +1

Query: 319 QHVCSWHDISDSLRNQGHGRHHDILP--GEVSFELPPEDTTQHGQ 447
           +H C+  D++ S+    H  H D L   G+   ++PP++   +GQ
Sbjct: 436 EHYCT-KDVNPSILFSSHQEHQDTLALGGQAPIDIPPDNPRHYGQ 479


>BC051722-1|AAH51722.1|  442|Homo sapiens DNAJC6 protein protein.
          Length = 442

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +1

Query: 319 QHVCSWHDISDSLRNQGHGRHHDILP--GEVSFELPPEDTTQHGQ 447
           +H C+  D++ S+    H  H D L   G+   ++PP++   +GQ
Sbjct: 366 EHYCT-KDVNPSILFSSHQEHQDTLALGGQAPIDIPPDNPRHYGQ 409


>AL355487-2|CAI23548.1|  970|Homo sapiens DnaJ (Hsp40) homolog,
           subfamily C, member 6 protein.
          Length = 970

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +1

Query: 319 QHVCSWHDISDSLRNQGHGRHHDILP--GEVSFELPPEDTTQHGQ 447
           +H C+  D++ S+    H  H D L   G+   ++PP++   +GQ
Sbjct: 436 EHYCT-KDVNPSILFSSHQEHQDTLALGGQAPIDIPPDNPRHYGQ 479


>AL355487-1|CAI23547.1|  913|Homo sapiens DnaJ (Hsp40) homolog,
           subfamily C, member 6 protein.
          Length = 913

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +1

Query: 319 QHVCSWHDISDSLRNQGHGRHHDILP--GEVSFELPPEDTTQHGQ 447
           +H C+  D++ S+    H  H D L   G+   ++PP++   +GQ
Sbjct: 379 EHYCT-KDVNPSILFSSHQEHQDTLALGGQAPIDIPPDNPRHYGQ 422


>AL139294-3|CAI18999.1|  970|Homo sapiens DnaJ (Hsp40) homolog,
           subfamily C, member 6 protein.
          Length = 970

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +1

Query: 319 QHVCSWHDISDSLRNQGHGRHHDILP--GEVSFELPPEDTTQHGQ 447
           +H C+  D++ S+    H  H D L   G+   ++PP++   +GQ
Sbjct: 436 EHYCT-KDVNPSILFSSHQEHQDTLALGGQAPIDIPPDNPRHYGQ 479


>AL139294-1|CAI18997.1|  913|Homo sapiens DnaJ (Hsp40) homolog,
           subfamily C, member 6 protein.
          Length = 913

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +1

Query: 319 QHVCSWHDISDSLRNQGHGRHHDILP--GEVSFELPPEDTTQHGQ 447
           +H C+  D++ S+    H  H D L   G+   ++PP++   +GQ
Sbjct: 379 EHYCT-KDVNPSILFSSHQEHQDTLALGGQAPIDIPPDNPRHYGQ 422


>AB007942-1|BAA32318.2|  937|Homo sapiens KIAA0473 protein protein.
          Length = 937

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +1

Query: 319 QHVCSWHDISDSLRNQGHGRHHDILP--GEVSFELPPEDTTQHGQ 447
           +H C+  D++ S+    H  H D L   G+   ++PP++   +GQ
Sbjct: 403 EHYCT-KDVNPSILFSSHQEHQDTLALGGQAPIDIPPDNPRHYGQ 446


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,353,581
Number of Sequences: 237096
Number of extensions: 3123537
Number of successful extensions: 8381
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 7836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8381
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9813323168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)