Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0248.Seq
(797 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 41 0.001
AL132865-18|CAJ76950.1| 282|Caenorhabditis elegans Hypothetical... 36 0.044
AL132865-11|CAC42380.2| 265|Caenorhabditis elegans Hypothetical... 36 0.044
AL132865-10|CAB60607.2| 279|Caenorhabditis elegans Hypothetical... 36 0.044
AL132865-9|CAB60608.2| 276|Caenorhabditis elegans Hypothetical ... 36 0.044
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 5.1
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 2/90 (2%)
Frame = -1
Query: 707 PPGXPXPEXQXSPGLTPLLSGXKLFPXKPGXYRG--IXPKREIFPKEXPXNGPDVKPXMM 534
P P P+ + P P+L + KP + + PK FPK P + P +P
Sbjct: 46 PKPKPMPKHKPKPFPKPMLFPKPMPKHKPKPFPKPMLFPKPMPFPKPMPKSKPKSEPFPN 105
Query: 533 PXXFXKPSRXVIWPPXXFRRPVLXPXSPFP 444
P F KP P F +P+L P P P
Sbjct: 106 PMPFPKPKPMPKHKPKPFPKPMLFP-KPMP 134
Score = 31.5 bits (68), Expect = 0.72
Identities = 25/88 (28%), Positives = 33/88 (37%), Gaps = 2/88 (2%)
Frame = -1
Query: 707 PPGXPXPEXQXSPGLTPLLSGXKLFPXKPGXYRGIXPKREIFPKEXPXNGP--DVKPXMM 534
P P P+ + P P+L + KP + PK + PK P P +KP M
Sbjct: 216 PMPKPMPKHKPKPFPKPMLFPKPMPIPKPMPFPKPMPKPKPKPKPMPKPKPKLKLKPKPM 275
Query: 533 PXXFXKPSRXVIWPPXXFRRPVLXPXSP 450
P KP P P+L P P
Sbjct: 276 PFPKPKPKLKPKTKPKKNPVPILKPIPP 303
Score = 30.7 bits (66), Expect = 1.3
Identities = 28/98 (28%), Positives = 39/98 (39%), Gaps = 10/98 (10%)
Frame = -1
Query: 707 PPGXPXPEXQXSPGLTPLLSGXKLFPXKPGXYRG--IXPKREIFPKEXPXNGPDVKPXMM 534
P P P+ + P P+L + KP + + PK FPK P + P +P
Sbjct: 110 PKPKPMPKHKPKPFPKPMLFPKPMPIPKPMPFPKPMLFPKPMPFPKPMPKSKPKSEPFPN 169
Query: 533 PXXFXKPS-----RXVIWP---PXXFRRPVLXPXSPFP 444
P F KP + P P F +P+L P P P
Sbjct: 170 PMPFPKPMPKPKPKPKPMPKHKPKPFPKPMLFP-KPMP 206
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 8/60 (13%)
Frame = -1
Query: 599 PKREIFPKEXPXNGPDVKPXMMPXXFXKPS-----RXVIWP---PXXFRRPVLXPXSPFP 444
PK E FPK P + P +P P F KP + P P F +P+L P P P
Sbjct: 12 PKSEPFPKPMPKSKPKSEPFPSPMPFPKPMPKPKPKPKPMPKHKPKPFPKPMLFP-KPMP 70
Score = 28.3 bits (60), Expect = 6.7
Identities = 26/83 (31%), Positives = 31/83 (37%)
Frame = -1
Query: 707 PPGXPXPEXQXSPGLTPLLSGXKLFPXKPGXYRGIXPKREIFPKEXPXNGPDVKPXMMPX 528
P P P+ + P P+ LFP KP PK FPK P P KP P
Sbjct: 182 PKPKPMPKHKPKPFPKPM-----LFP-KPMP----IPKPMPFPKPMPKPMPKHKPKPFPK 231
Query: 527 XFXKPSRXVIWPPXXFRRPVLXP 459
P I P F +P+ P
Sbjct: 232 PMLFPKPMPIPKPMPFPKPMPKP 254
>AL132865-18|CAJ76950.1| 282|Caenorhabditis elegans Hypothetical
protein Y62E10A.13d protein.
Length = 282
Score = 35.5 bits (78), Expect = 0.044
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +3
Query: 366 QADCXCFDVDSTVLQDXGIXXLGKXCG 446
+AD CFDVDSTV QD GI L G
Sbjct: 56 KADAVCFDVDSTVCQDEGIDELAAYLG 82
>AL132865-11|CAC42380.2| 265|Caenorhabditis elegans Hypothetical
protein Y62E10A.13c protein.
Length = 265
Score = 35.5 bits (78), Expect = 0.044
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +3
Query: 366 QADCXCFDVDSTVLQDXGIXXLGKXCG 446
+AD CFDVDSTV QD GI L G
Sbjct: 39 KADAVCFDVDSTVCQDEGIDELAAYLG 65
>AL132865-10|CAB60607.2| 279|Caenorhabditis elegans Hypothetical
protein Y62E10A.13b protein.
Length = 279
Score = 35.5 bits (78), Expect = 0.044
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +3
Query: 366 QADCXCFDVDSTVLQDXGIXXLGKXCG 446
+AD CFDVDSTV QD GI L G
Sbjct: 55 KADAVCFDVDSTVCQDEGIDELAAYLG 81
>AL132865-9|CAB60608.2| 276|Caenorhabditis elegans Hypothetical
protein Y62E10A.13a protein.
Length = 276
Score = 35.5 bits (78), Expect = 0.044
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +3
Query: 366 QADCXCFDVDSTVLQDXGIXXLGKXCG 446
+AD CFDVDSTV QD GI L G
Sbjct: 52 KADAVCFDVDSTVCQDEGIDELAAYLG 78
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.7 bits (61), Expect = 5.1
Identities = 24/87 (27%), Positives = 27/87 (31%)
Frame = -1
Query: 704 PGXPXPEXQXSPGLTPLLSGXKLFPXKPGXYRGIXPKREIFPKEXPXNGPDVKPXMMPXX 525
PG P P + P + P P R P P P P P
Sbjct: 98 PGYPVPGQEGHQVPAPQHGDHEASPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPP- 156
Query: 524 FXKPSRXVIWPPXXFRRPVLXPXSPFP 444
P R + PP RRP P SP P
Sbjct: 157 ---PRRPPMTPPSPQRRPPRTPPSPEP 180
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,423,801
Number of Sequences: 27780
Number of extensions: 200612
Number of successful extensions: 321
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 314
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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