Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0248.Seq
         (797 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g18640.2 68414.m02324 3-phosphoserine phosphatase (PSP) nearl...    38   0.010
At1g18640.1 68414.m02323 3-phosphoserine phosphatase (PSP) nearl...    38   0.010
At1g26150.1 68414.m03192 protein kinase family protein similar t...    29   3.6  

>At1g18640.2 68414.m02324 3-phosphoserine phosphatase (PSP) nearly
           identical to 3-phosphoserine phosphatase GI:3759177 from
           [Arabidopsis thaliana]
          Length = 295

 Score = 37.5 bits (83), Expect = 0.010
 Identities = 18/40 (45%), Positives = 21/40 (52%)
 Frame = +3

Query: 372 DCXCFDVDSTVLQDXGIXXLGKXCGEXRPGXKXWXAEAXG 491
           +  CFDVDSTV  D GI  L + CG  +     W A A G
Sbjct: 84  EAVCFDVDSTVCVDEGIDELAEFCGAGK-AVAEWTARAMG 122


>At1g18640.1 68414.m02323 3-phosphoserine phosphatase (PSP) nearly
           identical to 3-phosphoserine phosphatase GI:3759177 from
           [Arabidopsis thaliana]
          Length = 295

 Score = 37.5 bits (83), Expect = 0.010
 Identities = 18/40 (45%), Positives = 21/40 (52%)
 Frame = +3

Query: 372 DCXCFDVDSTVLQDXGIXXLGKXCGEXRPGXKXWXAEAXG 491
           +  CFDVDSTV  D GI  L + CG  +     W A A G
Sbjct: 84  EAVCFDVDSTVCVDEGIDELAEFCGAGK-AVAEWTARAMG 122


>At1g26150.1 68414.m03192 protein kinase family protein similar to
           Pto kinase interactor 1 GI:3668069 from [Lycopersicon
           esculentum]
          Length = 760

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 25/89 (28%), Positives = 29/89 (32%), Gaps = 2/89 (2%)
 Frame = -1

Query: 710 DPPGXPXPEXQXSPGLTPLLSGXKLFPXKPGXYRGIXPKREIFP--KEXPXNGPDVKPXM 537
           DPP  P P  +  P   P  S  +  P  P       P+    P   E P   P      
Sbjct: 161 DPPSNPLPPPKLVP---PSHSPPRHLPSPPASEIPPPPRHLPSPPASERPSTPPSDSEHP 217

Query: 536 MPXXFXKPSRXVIWPPXXFRRPVLXPXSP 450
            P     P R    PP   +RP   P SP
Sbjct: 218 SPPPPGHPKRREQPPPPGSKRPTPSPPSP 246


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,705,248
Number of Sequences: 28952
Number of extensions: 171415
Number of successful extensions: 253
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 253
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1804564000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)