BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0245.Seq
(797 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X53793-1|CAA37801.1| 425|Homo sapiens ADE2H1 protein. 129 1e-29
BT006988-1|AAP35634.1| 425|Homo sapiens phosphoribosylaminoimid... 129 1e-29
BC019255-1|AAH19255.1| 425|Homo sapiens phosphoribosylaminoimid... 129 1e-29
BC010273-1|AAH10273.1| 425|Homo sapiens phosphoribosylaminoimid... 129 1e-29
AF180298-1|AAQ13674.1| 418|Homo sapiens transcriptional regulat... 33 1.6
Z93024-4|CAI18792.1| 2253|Homo sapiens polycystic kidney disease... 30 8.4
EF517278-1|ABR22603.1| 2255|Homo sapiens PKDREJ protein. 30 8.4
AL078611-3|CAI18766.1| 2253|Homo sapiens polycystic kidney disea... 30 8.4
AL031034-1|CAI18795.1| 2253|Homo sapiens polycystic kidney disea... 30 8.4
AF116458-1|AAD18021.1| 2253|Homo sapiens polycystic kidney disea... 30 8.4
>X53793-1|CAA37801.1| 425|Homo sapiens ADE2H1 protein.
Length = 425
Score = 129 bits (311), Expect = 1e-29
Identities = 63/95 (66%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Frame = +1
Query: 256 NHDPQWSEEQIISAKFNYNGLLIGRDEVDYMRKATILIFEILEKAWALRDCALIDMKIEF 435
N+DPQWSEEQ+I+AKF + GLLIG+ EVD M AT IFEILEK+W ++C L+DMKIEF
Sbjct: 135 NNDPQWSEEQLIAAKFCFAGLLIGQTEVDIMSHATQAIFEILEKSWLPQNCTLVDMKIEF 194
Query: 436 GVD-TEGSIVLADVIDSDSWRLWPSVIKD*WLDKQ 537
GVD T IVLADVID+DSWRLWPS + DKQ
Sbjct: 195 GVDVTTKEIVLADVIDNDSWRLWPSGDRSQQKDKQ 229
Score = 105 bits (252), Expect = 2e-22
Identities = 46/68 (67%), Positives = 54/68 (79%)
Frame = +2
Query: 65 SGIKTAFVKIASETAFLSKKCEMIPIEWVTRRLATGSFLKRNPGVPEGFRFTPPKQETFF 244
+GIKTAF + ETAF++ +CEMIPIEWV RR+ATGSFLKRNPGV EG++F PPK E FF
Sbjct: 71 AGIKTAFTRKCGETAFIAPQCEMIPIEWVCRRIATGSFLKRNPGVKEGYKFYPPKVELFF 130
Query: 245 KDDETTIP 268
KDD P
Sbjct: 131 KDDANNDP 138
>BT006988-1|AAP35634.1| 425|Homo sapiens
phosphoribosylaminoimidazole carboxylase,
phosphoribosylaminoimidazole succinoc protein.
Length = 425
Score = 129 bits (311), Expect = 1e-29
Identities = 63/95 (66%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Frame = +1
Query: 256 NHDPQWSEEQIISAKFNYNGLLIGRDEVDYMRKATILIFEILEKAWALRDCALIDMKIEF 435
N+DPQWSEEQ+I+AKF + GLLIG+ EVD M AT IFEILEK+W ++C L+DMKIEF
Sbjct: 135 NNDPQWSEEQLIAAKFCFAGLLIGQTEVDIMSHATQAIFEILEKSWLPQNCTLVDMKIEF 194
Query: 436 GVD-TEGSIVLADVIDSDSWRLWPSVIKD*WLDKQ 537
GVD T IVLADVID+DSWRLWPS + DKQ
Sbjct: 195 GVDVTTKEIVLADVIDNDSWRLWPSGDRSQQKDKQ 229
Score = 105 bits (252), Expect = 2e-22
Identities = 46/68 (67%), Positives = 54/68 (79%)
Frame = +2
Query: 65 SGIKTAFVKIASETAFLSKKCEMIPIEWVTRRLATGSFLKRNPGVPEGFRFTPPKQETFF 244
+GIKTAF + ETAF++ +CEMIPIEWV RR+ATGSFLKRNPGV EG++F PPK E FF
Sbjct: 71 AGIKTAFTRKCGETAFIAPQCEMIPIEWVCRRIATGSFLKRNPGVKEGYKFYPPKVELFF 130
Query: 245 KDDETTIP 268
KDD P
Sbjct: 131 KDDANNDP 138
>BC019255-1|AAH19255.1| 425|Homo sapiens
phosphoribosylaminoimidazole carboxylase,
phosphoribosylaminoimidazole succinoc protein.
Length = 425
Score = 129 bits (311), Expect = 1e-29
Identities = 63/95 (66%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Frame = +1
Query: 256 NHDPQWSEEQIISAKFNYNGLLIGRDEVDYMRKATILIFEILEKAWALRDCALIDMKIEF 435
N+DPQWSEEQ+I+AKF + GLLIG+ EVD M AT IFEILEK+W ++C L+DMKIEF
Sbjct: 135 NNDPQWSEEQLIAAKFCFAGLLIGQTEVDIMSHATQAIFEILEKSWLPQNCTLVDMKIEF 194
Query: 436 GVD-TEGSIVLADVIDSDSWRLWPSVIKD*WLDKQ 537
GVD T IVLADVID+DSWRLWPS + DKQ
Sbjct: 195 GVDVTTKEIVLADVIDNDSWRLWPSGDRSQQKDKQ 229
Score = 105 bits (252), Expect = 2e-22
Identities = 46/68 (67%), Positives = 54/68 (79%)
Frame = +2
Query: 65 SGIKTAFVKIASETAFLSKKCEMIPIEWVTRRLATGSFLKRNPGVPEGFRFTPPKQETFF 244
+GIKTAF + ETAF++ +CEMIPIEWV RR+ATGSFLKRNPGV EG++F PPK E FF
Sbjct: 71 AGIKTAFTRKCGETAFIAPQCEMIPIEWVCRRIATGSFLKRNPGVKEGYKFYPPKVELFF 130
Query: 245 KDDETTIP 268
KDD P
Sbjct: 131 KDDANNDP 138
>BC010273-1|AAH10273.1| 425|Homo sapiens
phosphoribosylaminoimidazole carboxylase,
phosphoribosylaminoimidazole succinoc protein.
Length = 425
Score = 129 bits (311), Expect = 1e-29
Identities = 63/95 (66%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Frame = +1
Query: 256 NHDPQWSEEQIISAKFNYNGLLIGRDEVDYMRKATILIFEILEKAWALRDCALIDMKIEF 435
N+DPQWSEEQ+I+AKF + GLLIG+ EVD M AT IFEILEK+W ++C L+DMKIEF
Sbjct: 135 NNDPQWSEEQLIAAKFCFAGLLIGQTEVDIMSHATQAIFEILEKSWLPQNCTLVDMKIEF 194
Query: 436 GVD-TEGSIVLADVIDSDSWRLWPSVIKD*WLDKQ 537
GVD T IVLADVID+DSWRLWPS + DKQ
Sbjct: 195 GVDVTTKEIVLADVIDNDSWRLWPSGDRSQQKDKQ 229
Score = 105 bits (252), Expect = 2e-22
Identities = 46/68 (67%), Positives = 54/68 (79%)
Frame = +2
Query: 65 SGIKTAFVKIASETAFLSKKCEMIPIEWVTRRLATGSFLKRNPGVPEGFRFTPPKQETFF 244
+GIKTAF + ETAF++ +CEMIPIEWV RR+ATGSFLKRNPGV EG++F PPK E FF
Sbjct: 71 AGIKTAFTRKCGETAFIAPQCEMIPIEWVCRRIATGSFLKRNPGVKEGYKFYPPKVELFF 130
Query: 245 KDDETTIP 268
KDD P
Sbjct: 131 KDDANNDP 138
>AF180298-1|AAQ13674.1| 418|Homo sapiens transcriptional regulator
ING2 protein.
Length = 418
Score = 32.7 bits (71), Expect = 1.6
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = +1
Query: 253 RNHDPQWSEEQIISAKFNYNGLLIGRDEVDYMRKATILIFEILEKAWALRDCALIDMKIE 432
+ + P+W EEQ+ S K +Y L G DE + I++++++ D L K+E
Sbjct: 51 KKNKPEWREEQMASIKKDYYKALEGADEKVQLANQ---IYDLVDRHLRKLDQELAKFKME 107
Query: 433 FGVDTEG 453
D G
Sbjct: 108 LEADNAG 114
>Z93024-4|CAI18792.1| 2253|Homo sapiens polycystic kidney disease
(polycystin) and REJ homolog (sperm receptor for egg
protein.
Length = 2253
Score = 30.3 bits (65), Expect = 8.4
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +1
Query: 148 GYPPPCNWLFPKKKSWCTRRLQVHSSKTRDVLQG*RNHDPQWSEEQIISAKFNY 309
GY WLF S+C L V SK +L G R + P++ + S K+ Y
Sbjct: 1603 GYDKSIEWLFASFCSFCQSVLLVQPSKI-ILLSGFRTNKPKYCKNLSWSTKYKY 1655
>EF517278-1|ABR22603.1| 2255|Homo sapiens PKDREJ protein.
Length = 2255
Score = 30.3 bits (65), Expect = 8.4
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +1
Query: 148 GYPPPCNWLFPKKKSWCTRRLQVHSSKTRDVLQG*RNHDPQWSEEQIISAKFNY 309
GY WLF S+C L V SK +L G R + P++ + S K+ Y
Sbjct: 1605 GYDKSIEWLFASFCSFCQSVLLVQPSKI-ILLSGFRTNKPKYCKNLSWSTKYKY 1657
>AL078611-3|CAI18766.1| 2253|Homo sapiens polycystic kidney disease
(polycystin) and REJ homolog (sperm receptor for egg
protein.
Length = 2253
Score = 30.3 bits (65), Expect = 8.4
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +1
Query: 148 GYPPPCNWLFPKKKSWCTRRLQVHSSKTRDVLQG*RNHDPQWSEEQIISAKFNY 309
GY WLF S+C L V SK +L G R + P++ + S K+ Y
Sbjct: 1603 GYDKSIEWLFASFCSFCQSVLLVQPSKI-ILLSGFRTNKPKYCKNLSWSTKYKY 1655
>AL031034-1|CAI18795.1| 2253|Homo sapiens polycystic kidney disease
(polycystin) and REJ homolog (sperm receptor for egg
protein.
Length = 2253
Score = 30.3 bits (65), Expect = 8.4
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +1
Query: 148 GYPPPCNWLFPKKKSWCTRRLQVHSSKTRDVLQG*RNHDPQWSEEQIISAKFNY 309
GY WLF S+C L V SK +L G R + P++ + S K+ Y
Sbjct: 1603 GYDKSIEWLFASFCSFCQSVLLVQPSKI-ILLSGFRTNKPKYCKNLSWSTKYKY 1655
>AF116458-1|AAD18021.1| 2253|Homo sapiens polycystic kidney disease
and receptor for egg jelly related protein protein.
Length = 2253
Score = 30.3 bits (65), Expect = 8.4
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +1
Query: 148 GYPPPCNWLFPKKKSWCTRRLQVHSSKTRDVLQG*RNHDPQWSEEQIISAKFNY 309
GY WLF S+C L V SK +L G R + P++ + S K+ Y
Sbjct: 1603 GYDKSIEWLFASFCSFCQSVLLVQPSKI-ILLSGFRTNKPKYCKNLSWSTKYKY 1655
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,174,861
Number of Sequences: 237096
Number of extensions: 2391795
Number of successful extensions: 4329
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4325
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9813323168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -