Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0244.Seq
         (797 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0480 + 6279576-6279755,6279863-6279988,6280074-6280151,628...    30   1.9  
09_04_0447 + 17688248-17688319,17688414-17688515,17688852-176889...    29   4.3  
11_01_0728 + 6023361-6023495,6024880-6025212,6025306-6025361,602...    29   5.7  

>04_01_0480 +
           6279576-6279755,6279863-6279988,6280074-6280151,
           6280847-6280972,6281244-6281345,6281416-6281490,
           6281852-6281975,6283005-6283107,6283546-6283617,
           6283662-6283788,6284125-6284180,6284438-6284453
          Length = 394

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +2

Query: 56  PN*WLVSSYCMLSGSCYTYCICARSSVTLPT 148
           P+ W++  YC   G+ Y Y IC  S  T  T
Sbjct: 43  PDGWIMEVYCDDDGTIYRYYICPLSGTTFTT 73


>09_04_0447 +
           17688248-17688319,17688414-17688515,17688852-17688981,
           17689198-17689290,17689363-17689451,17689889-17689969,
           17690118-17690207,17690653-17690772,17690877-17690927,
           17691125-17691171,17691321-17691378,17691451-17691507
          Length = 329

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 14/52 (26%), Positives = 26/52 (50%)
 Frame = +3

Query: 303 NGLLIGRDEVDYMRKATILIFEILEKAWALRDCALIDMKIEFGVDTEGSIVL 458
           N  L+ +++ D  R   + +F   ++        L+D K EFG   +G+I+L
Sbjct: 165 NSGLMSKEDFDEARSKALSLFAYGQEVALENGLILVDTKYEFGKTADGTIML 216


>11_01_0728 +
           6023361-6023495,6024880-6025212,6025306-6025361,
           6025526-6025684,6025790-6025889,6026481-6026623,
           6026728-6026833,6027139-6027277,6027363-6027631,
           6027734-6027820
          Length = 508

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = -2

Query: 418 FMSISAQSRRAQAFSKISNIRIVAFLM*STSSRPIRR-PL*LNLAEMICSSDHWGS 254
           F+SISA+ R A A  ++  ++ + +   S      R+ PL ++  ++ CS D W +
Sbjct: 122 FLSISAEFRSAPAMGELGALQSIVYHRGSLRLLDQRKLPLEVDYIDVKCSGDGWNA 177


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,798,521
Number of Sequences: 37544
Number of extensions: 242619
Number of successful extensions: 398
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 398
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)