Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0242.Seq
(797 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml prot... 153 2e-37
U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal prot... 153 2e-37
U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal prot... 153 2e-37
AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p pro... 153 2e-37
AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA... 153 2e-37
AY051791-1|AAK93215.1| 674|Drosophila melanogaster LD30826p pro... 29 9.7
AE014298-2657|AAN09455.1| 674|Drosophila melanogaster CG7536-PB... 29 9.7
AE014298-2656|AAF48793.2| 674|Drosophila melanogaster CG7536-PA... 29 9.7
>X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml protein
S2 protein.
Length = 267
Score = 153 bits (372), Expect = 2e-37
Identities = 73/76 (96%), Positives = 74/76 (97%)
Frame = +1
Query: 253 FFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 432
FFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI
Sbjct: 79 FFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 138
Query: 433 ILAKLSVLPVRRGYWG 480
ILAKLSV+PVRRGYWG
Sbjct: 139 ILAKLSVVPVRRGYWG 154
Score = 80.6 bits (190), Expect = 2e-15
Identities = 37/42 (88%), Positives = 38/42 (90%)
Frame = +2
Query: 128 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIID 253
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIID
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIID 78
>U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 153 bits (372), Expect = 2e-37
Identities = 73/76 (96%), Positives = 74/76 (97%)
Frame = +1
Query: 253 FFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 432
FFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI
Sbjct: 79 FFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 138
Query: 433 ILAKLSVLPVRRGYWG 480
ILAKLSV+PVRRGYWG
Sbjct: 139 ILAKLSVVPVRRGYWG 154
Score = 80.6 bits (190), Expect = 2e-15
Identities = 37/42 (88%), Positives = 38/42 (90%)
Frame = +2
Query: 128 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIID 253
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIID
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIID 78
>U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 153 bits (372), Expect = 2e-37
Identities = 73/76 (96%), Positives = 74/76 (97%)
Frame = +1
Query: 253 FFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 432
FFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI
Sbjct: 79 FFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 138
Query: 433 ILAKLSVLPVRRGYWG 480
ILAKLSV+PVRRGYWG
Sbjct: 139 ILAKLSVVPVRRGYWG 154
Score = 80.6 bits (190), Expect = 2e-15
Identities = 37/42 (88%), Positives = 38/42 (90%)
Frame = +2
Query: 128 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIID 253
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIID
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIID 78
>AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p
protein.
Length = 267
Score = 153 bits (372), Expect = 2e-37
Identities = 73/76 (96%), Positives = 74/76 (97%)
Frame = +1
Query: 253 FFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 432
FFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI
Sbjct: 79 FFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 138
Query: 433 ILAKLSVLPVRRGYWG 480
ILAKLSV+PVRRGYWG
Sbjct: 139 ILAKLSVVPVRRGYWG 154
Score = 80.6 bits (190), Expect = 2e-15
Identities = 37/42 (88%), Positives = 38/42 (90%)
Frame = +2
Query: 128 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIID 253
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIID
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIID 78
>AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA
protein.
Length = 267
Score = 153 bits (372), Expect = 2e-37
Identities = 73/76 (96%), Positives = 74/76 (97%)
Frame = +1
Query: 253 FFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 432
FFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI
Sbjct: 79 FFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 138
Query: 433 ILAKLSVLPVRRGYWG 480
ILAKLSV+PVRRGYWG
Sbjct: 139 ILAKLSVVPVRRGYWG 154
Score = 80.6 bits (190), Expect = 2e-15
Identities = 37/42 (88%), Positives = 38/42 (90%)
Frame = +2
Query: 128 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIID 253
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIID
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIID 78
>AY051791-1|AAK93215.1| 674|Drosophila melanogaster LD30826p
protein.
Length = 674
Score = 28.7 bits (61), Expect = 9.7
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 398 ARKSPLPF-EALLSLLSCQFYQSEEGTGGNKIXKPHNRPLQ 517
AR+ L F E LSL+ Q YQ+ TG KI K H++ L+
Sbjct: 119 ARELKLAFSEFYLSLILLQNYQNLNHTGFRKILKKHDKLLR 159
>AE014298-2657|AAN09455.1| 674|Drosophila melanogaster CG7536-PB,
isoform B protein.
Length = 674
Score = 28.7 bits (61), Expect = 9.7
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 398 ARKSPLPF-EALLSLLSCQFYQSEEGTGGNKIXKPHNRPLQ 517
AR+ L F E LSL+ Q YQ+ TG KI K H++ L+
Sbjct: 119 ARELKLAFSEFYLSLILLQNYQNLNHTGFRKILKKHDKLLR 159
>AE014298-2656|AAF48793.2| 674|Drosophila melanogaster CG7536-PA,
isoform A protein.
Length = 674
Score = 28.7 bits (61), Expect = 9.7
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 398 ARKSPLPF-EALLSLLSCQFYQSEEGTGGNKIXKPHNRPLQ 517
AR+ L F E LSL+ Q YQ+ TG KI K H++ L+
Sbjct: 119 ARELKLAFSEFYLSLILLQNYQNLNHTGFRKILKKHDKLLR 159
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,037,078
Number of Sequences: 53049
Number of extensions: 623513
Number of successful extensions: 2640
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2144
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3716337612
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -