Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0241.Seq
(598 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP1E11.10 |||ankyrin repeat protein, unknown biological role|S... 40 3e-04
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce... 36 0.006
SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex s... 33 0.042
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 32 0.055
SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual 31 0.097
SPCC1827.04 |||ankyrin repeat protein, unknown biological role|S... 29 0.39
SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyce... 28 1.2
SPBC16A3.13 |meu7|aah4|alpha-amylase homolog Aah4|Schizosaccharo... 27 2.7
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 27 2.7
SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharo... 26 3.6
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 26 3.6
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 26 4.8
SPCC11E10.06c |||RNA polymerase II elongator complex subunit Elp... 25 6.3
>SPCP1E11.10 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 207
Score = 39.9 bits (89), Expect = 3e-04
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +2
Query: 335 GARVNEKNKDGQTPLHVATEHSHLDAMDLLLRHGAKVNACDGCGESALCV 484
G N +++G TP+H A + H D + +L+ G +N D GE+ L V
Sbjct: 27 GISPNAADENGYTPIHAAVSYGHSDLLKILVERGGDINIRDQDGETPLFV 76
Score = 29.5 bits (63), Expect = 0.39
Identities = 11/34 (32%), Positives = 23/34 (67%)
Frame = +2
Query: 284 ASVYPKRKQVMEMLIRKGARVNEKNKDGQTPLHV 385
A+V ++++L+ +G +N +++DG+TPL V
Sbjct: 43 AAVSYGHSDLLKILVERGGDINIRDQDGETPLFV 76
>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1151
Score = 35.5 bits (78), Expect = 0.006
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +2
Query: 323 LIRKGARVNEKNKDGQTPLHVATEHSHLDAMDLLLRHGAKVNACDGCGESAL 478
L G VN+++ G TPLH A+ + H D LL +GAK + G+ +
Sbjct: 881 LCNAGCDVNKRDALGYTPLHYASLYDHKDICVNLLSNGAKPDVIGASGKKPI 932
>SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex
subunit Res2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 657
Score = 32.7 bits (71), Expect = 0.042
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 362 DGQTPLHVATEHSHLDAMDLLLRHGAKVNACDGCGESAL 478
DG T LH A H++ + LLLR A + C+ ++ L
Sbjct: 247 DGHTSLHWACSMGHIEMIKLLLRANADIGVCNRLSQTPL 285
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 32.3 bits (70), Expect = 0.055
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2
Query: 344 VNEKNKDGQTPLHVATEHSHLDAMDLLLRHGAKVNACDG 460
VN ++ G T LH A + + LL HGA VNA G
Sbjct: 27 VNATDEGGATALHWAALNQQIPICKFLLEHGADVNAIGG 65
Score = 27.1 bits (57), Expect = 2.1
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 311 VMEMLIRKGARVNEKNKDGQT-PLHVATEHSHLDAMDLLLRHGA 439
+ + L+ GA VN D Q P+H A + + + L++HGA
Sbjct: 49 ICKFLLEHGADVNAIGGDLQAAPIHWAAKRGSVKTVHYLVQHGA 92
>SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 234
Score = 31.5 bits (68), Expect = 0.097
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +2
Query: 302 RKQVMEMLIRKGAR-VNEKNKDGQTPLHVATEHSHLDAMDLLLRHGAKVNACDGCGESAL 478
R ++++L K + +K+ GQTPLH A + + L+ A +N D G + L
Sbjct: 119 RLSIVQLLCDKAPELIRKKDLQGQTPLHRAAAVGKIQVVKYLISQRAPLNTSDSYGFTPL 178
>SPCC1827.04 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 600
Score = 29.5 bits (63), Expect = 0.39
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +2
Query: 254 HRRSASTLRTASVYPKRKQVMEMLIRKGARVNEKNKDGQTPLHVATEHSHLDAMDLLLRH 433
H +++ L A V K +++ L+R GA N +G+TP ++T + + L+ RH
Sbjct: 430 HLHTSTPLHYA-VTQKNAKLVAKLLRNGADPAMLNGNGKTPFEISTGNKEVKDEFLIARH 488
Score = 25.4 bits (53), Expect = 6.3
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +2
Query: 371 TPLHVATEHSHLDAMDLLLRHGAKVNACDGCGESALCVGXXGRE 502
TPLH A + + LLR+GA +G G++ + +E
Sbjct: 435 TPLHYAVTQKNAKLVAKLLRNGADPAMLNGNGKTPFEISTGNKE 478
>SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1347
Score = 27.9 bits (59), Expect = 1.2
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 341 RVNEKNKDGQTPLHVATEHSHLDAMDLLLRH 433
R+N+K++ G+T LH+A + + LL+H
Sbjct: 44 RINQKDRYGRTVLHIAVSENKNSFVRSLLQH 74
>SPBC16A3.13 |meu7|aah4|alpha-amylase homolog
Aah4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 774
Score = 26.6 bits (56), Expect = 2.7
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +2
Query: 293 YPKRKQVMEML--IRKGARVNEKNKDGQTPLHVATEHSHLDAMDLLLRHGAKVNACDGCG 466
+PKR + I + + ++KDG+ L++ ++ S +D LLLR G + + G
Sbjct: 608 FPKRNPYYKFTSTINRFRKAMIESKDGEAFLNMQSDISIVDKRILLLRRGKVITVLNNLG 667
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 26.6 bits (56), Expect = 2.7
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 344 VNEKNKDGQTPLHVATEHSHLDAMDLLLRH 433
VN +K+ TPLH+A D ++ LL H
Sbjct: 82 VNAYDKNKNTPLHLAAMAGRQDIVEALLLH 111
Score = 26.2 bits (55), Expect = 3.6
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 359 KDGQTPLHVATEHSHLDAMDLLLRHGA 439
K GQT LHVAT+ + + LL +GA
Sbjct: 187 KTGQTYLHVATKAKDAELVKWLLDNGA 213
>SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1616
Score = 26.2 bits (55), Expect = 3.6
Identities = 13/53 (24%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -3
Query: 158 CWIAVEDNCFLTLVGSASLQ-ASRRQCPRYSKASLSWSSLVGATSSADFPWQL 3
C++ + NCF L GS +++ A + QC + + +S++ + ++ W L
Sbjct: 1366 CFVRLMINCFKDLKGSDAIEDAEKMQC-LFLLTVEATNSIISPNADYEYVWSL 1417
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 26.2 bits (55), Expect = 3.6
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +2
Query: 44 ENSKTDWPSSTADIVSWKPAGSR 112
E K DWP D+ SW P +R
Sbjct: 43 EFRKNDWPYPRGDLYSWVPVLNR 65
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 25.8 bits (54), Expect = 4.8
Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 4/26 (15%)
Frame = +3
Query: 138 VFHGDPASVPK-HVRIDD---REHAV 203
V HGDPA +P V+I+D R HAV
Sbjct: 325 VLHGDPARLPNFKVKIEDAPRRRHAV 350
>SPCC11E10.06c |||RNA polymerase II elongator complex subunit Elp4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 361
Score = 25.4 bits (53), Expect = 6.3
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 250 LTQEIGLYTAHRQRLPEEETGHGNADQEG 336
+TQ +GL+ H+ L T H N+++ G
Sbjct: 288 VTQPLGLFRIHKLPLALPFTNHANSNEAG 316
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,134,322
Number of Sequences: 5004
Number of extensions: 38780
Number of successful extensions: 118
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 118
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 260219058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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