Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0240.Seq
(698 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomy... 28 1.5
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 28 1.5
SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase Hrp1|Schizosac... 27 2.0
SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces ... 27 2.0
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 27 2.0
SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein 4|Schizosacc... 27 3.4
SPAC823.03 |ppk15||serine/threonine protein kinase Ppk15 |Schizo... 27 3.4
SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3 |Schizosacch... 26 4.5
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 26 6.0
SPAC2G11.09 |||DUF221 family protein|Schizosaccharomyces pombe|c... 26 6.0
SPAC644.18c |bet3||TRAPP complex subunit Bet3 |Schizosaccharomyc... 25 7.9
SPCC622.09 |htb1||histone H2B |Schizosaccharomyces pombe|chr 3||... 25 7.9
SPAC11H11.04 |mam2||pheromone p-factor receptor|Schizosaccharomy... 25 7.9
SPAC2F7.16c |||phospholipase D |Schizosaccharomyces pombe|chr 1|... 25 7.9
>SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 542
Score = 27.9 bits (59), Expect = 1.5
Identities = 23/104 (22%), Positives = 37/104 (35%)
Frame = +3
Query: 255 EDLKEATENLDEIRDRKENERAVSTEKHKHGITKKLSSITKKRSSSPEVITLTQVGLETK 434
E L + + +L + E + +T KH+ T + + S+S E T T
Sbjct: 236 EKLSQLSSSLISSFSEQPKEHSPATSKHEPEETPASPTPSVSASTSRERSTSVAPSFITS 295
Query: 435 QDTVTPIPVQVASTTDLVAEKIEAVKRMTMISITEEMPEPRDVL 566
TP V + + E I E++P P D L
Sbjct: 296 DQAATP---DVLKSEEAHVESFSKESEKDQTPIPEDVPSPMDTL 336
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 27.9 bits (59), Expect = 1.5
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 198 VAHRITSQTIQSTWRTACQEDLKEA 272
VAH I ++T Q RT C+ ++KE+
Sbjct: 1293 VAHSIDAKTFQGVVRTFCKSEVKES 1317
>SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase
Hrp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1373
Score = 27.5 bits (58), Expect = 2.0
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +3
Query: 252 QEDLKEATENLDEIRDRKENERAVSTEKHKHGITKKLS-SITKKRSSSPEVITLTQVGL 425
+E + A +E R+R+E E + E H K+ + SITK++ E++ ++ L
Sbjct: 957 EERMLAAQRAKEEERERREEEERENDEDHPSRTYKRTTKSITKRQQRREEMVREKEIRL 1015
>SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 599
Score = 27.5 bits (58), Expect = 2.0
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Frame = +3
Query: 234 TWRTACQEDLKEATENLD-EIRDRKENER-AVSTEKHKHGITKKLSSITKKRSSSPEVIT 407
T RT L E ++ EIR+ ++ AVS ++ K SS +++ SS +
Sbjct: 498 THRTLSYSRLSELSKTFSPEIREPSLTKKTAVSMQESKEEGRSDESSESEESGSSSDESD 557
Query: 408 LTQVGLETKQDTVTPIPVQVASTTDLVAEKIEAVKRMTMIS 530
++ K+D PIPV+ ++T L +K KR + ++
Sbjct: 558 NSE-----KEDRSNPIPVEKRASTVLNTKKKRKAKRNSALA 593
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 27.5 bits (58), Expect = 2.0
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +3
Query: 240 RTACQEDLKEATE-NLDEIRDRKENERAVSTEKHKHGITKKLSSITKKRSSS 392
+ A +E K++++ ++ + +KE +RA S E K + K+ S K+ SSS
Sbjct: 34 KEAAKEIAKQSSKTDVSPKKSKKEAKRASSPEPSKKSVKKQKKSKKKEESSS 85
>SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 636
Score = 26.6 bits (56), Expect = 3.4
Identities = 21/93 (22%), Positives = 37/93 (39%)
Frame = +3
Query: 144 GRCRRVSQTQDIST*IARVAHRITSQTIQSTWRTACQEDLKEATENLDEIRDRKENERAV 323
GRC+ V + R+AH++ Q S A +E ++ E+ + R +E +
Sbjct: 351 GRCQEVIGRGAFG--VVRIAHKVDPQNSGSETLYAVKEFRRKPAESQKKYTKRLTSEFCI 408
Query: 324 STEKHKHGITKKLSSITKKRSSSPEVITLTQVG 422
S+ + L I + EV+ L G
Sbjct: 409 SSSLRHPNVIHTLDLIQDGKGDYCEVMELCSGG 441
>SPAC823.03 |ppk15||serine/threonine protein kinase Ppk15
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 534
Score = 26.6 bits (56), Expect = 3.4
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -1
Query: 545 HFFGNANHRHSLYSFDFFGHEIGRR 471
H F N NH + LY D G + GR+
Sbjct: 105 HGFDNVNHDYVLYVNDLLGTDEGRK 129
>SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 747
Score = 26.2 bits (55), Expect = 4.5
Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +3
Query: 264 KEATENLDEIR-DRKENERAVSTEKHKHGITKKLSSITKKRSSSPEVI--TLTQVGLETK 434
K A+ L I+ K N STE K+ + TKK + PE+ LTQ +E
Sbjct: 13 KVASSKLKNIKKSSKRNNSQSSTEPRKNATSLDSKKTTKKGVALPEIAERELTQEDIEFF 72
Query: 435 QDTVTPIPVQVASTTDLVAEKIE 503
+ + + + + + +K+E
Sbjct: 73 NENPSSLKYLSSINPEDLGKKVE 95
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 25.8 bits (54), Expect = 6.0
Identities = 24/105 (22%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Frame = +3
Query: 252 QEDLKEATENLDEIRDRKENERAVST-EKHKHGITKKLSSITKKRSSSPEVITLTQVGLE 428
+E +K+ + +++ + E +S EK K +++ ++ + + E++ + LE
Sbjct: 220 EESIKQVSSSIELEKINAEQRLQISELEKLKAAQEERIEKLSSN-NRNVEILKEEKNDLE 278
Query: 429 TKQDTVTPIPVQVASTTDLVAEKIEAVKRMTMISITEEMPEPRDV 563
+K +VA T +L EKI+ IT E+P P V
Sbjct: 279 SKLYRFEEYRDKVA-TLELENEKIQTELNSWKSLITNELPTPEAV 322
>SPAC2G11.09 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 796
Score = 25.8 bits (54), Expect = 6.0
Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = -2
Query: 208 LWATLAIQVDMSCVWLTLRQRPVSRQTLRCFLSRTLFKPQASISVDKYKKHTVV-SMCKF 32
LW+T+ +++ CV + L + +LS +F + Y T++ S +F
Sbjct: 688 LWSTIFLRMIFGCVIMQLTMMGLMSLRKAYWLSTVIFPLLCFTVISAYNFSTMIRSSMQF 747
Query: 31 VFFFY*R 11
V +Y R
Sbjct: 748 VSLYYIR 754
>SPAC644.18c |bet3||TRAPP complex subunit Bet3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 183
Score = 25.4 bits (53), Expect = 7.9
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = -2
Query: 241 RQVLW---IVCDVILWATLAIQVDMSCVWLTLRQRPVSRQTLRCFLSRTL 101
RQ LW I+C VI A +Q+D+ V+L R +R L R L
Sbjct: 125 RQKLWYSNILCGVIRGALEMLQMDVDAVFLRDILRGDEHTEIRVHLKRIL 174
>SPCC622.09 |htb1||histone H2B |Schizosaccharomyces pombe|chr
3|||Manual
Length = 126
Score = 25.4 bits (53), Expect = 7.9
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Frame = +3
Query: 183 T*IARVAHRITSQTIQSTWRTACQEDLKEATENLDEIRDRKENERAVST----EKHKHGI 350
T I+ A RI + + + E K A N +E + AV E KH +
Sbjct: 52 TGISNQAMRILNSFVNDIFERIATEASKLAAYNKKSTISSREIQTAVRLILPGELAKHAV 111
Query: 351 TKKLSSITKKRSSS 392
T+ S+TK SS+
Sbjct: 112 TEGTKSVTKYSSSA 125
>SPAC11H11.04 |mam2||pheromone p-factor receptor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 348
Score = 25.4 bits (53), Expect = 7.9
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 4 ICAFNKKKIRIYTLIQRCVFYIYQHLWM 87
ICA ++K RI T+I C+ + W+
Sbjct: 152 ICAHDRKTQRIMTVISACLTVLVLAFWI 179
>SPAC2F7.16c |||phospholipase D |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1369
Score = 25.4 bits (53), Expect = 7.9
Identities = 21/79 (26%), Positives = 31/79 (39%)
Frame = +2
Query: 329 RETQARHHQEVIINYKKTQFLPRSDYSNPSRTRD*ARYSNTDTSTSGIDDRSRGRKNRSC 508
+E QAR QE + N +T +D NP + NT S ++ + R N
Sbjct: 1262 KEEQARWRQEELSNLHETHEKSENDPKNPKAGSQGS--GNTSASEDSKTEKPKTRTNNGL 1319
Query: 509 KENDDD*HYRRNAGT*GRL 565
+ D Y G G+L
Sbjct: 1320 QVPDKRVVYDLLRGIRGQL 1338
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,898,996
Number of Sequences: 5004
Number of extensions: 61007
Number of successful extensions: 213
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 213
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 323158234
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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