Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0239.Seq
         (758 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7KPI8 Cluster: Aminopeptidase-1; n=3; Caenorhabditis e...    37   0.47 
UniRef50_A5E672 Cluster: Putative uncharacterized protein; n=1; ...    34   4.4  

>UniRef50_Q7KPI8 Cluster: Aminopeptidase-1; n=3; Caenorhabditis
           elegans|Rep: Aminopeptidase-1 - Caenorhabditis elegans
          Length = 609

 Score = 37.1 bits (82), Expect = 0.47
 Identities = 19/49 (38%), Positives = 26/49 (53%)
 Frame = -1

Query: 191 IKDVNSTNTSDNQLIKLVSRLAEADRDTATSSIPYHTMTGAL*TIPQKI 45
           ++ VN     D++  KLV  L  AD D A SS+PY   +  L TI Q +
Sbjct: 353 VRTVNDVFGPDHEYTKLVQNLGNADPDDAFSSVPYEKGSALLFTIEQAL 401


>UniRef50_A5E672 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 353

 Score = 33.9 bits (74), Expect = 4.4
 Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = +2

Query: 413 LYYFVFPKVVSKTPPLFYVQCGYRYMYRVLMGY*SVNH-ISWRMFNGNTEXPESSPGEPR 589
           L Y     +VS  P   Y++  YRY    L+ Y ++ H   W +FN   E P     + +
Sbjct: 30  LSYITPQLIVSSAPTTTYIESWYRYPLGDLLKYLNLKHPHHWWLFNFRGEEPGYLDEDVQ 89

Query: 590 NKIGTFP 610
            K+  +P
Sbjct: 90  GKVNHYP 96


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 750,618,790
Number of Sequences: 1657284
Number of extensions: 15536509
Number of successful extensions: 31565
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 30540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31554
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62969581935
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)