Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0237.Seq
(578 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g15825.1 68414.m01899 hydroxyproline-rich glycoprotein family... 31 0.73
At4g25940.1 68417.m03731 epsin N-terminal homology (ENTH) domain... 29 1.7
At1g01900.1 68414.m00107 subtilase family protein contains simil... 29 1.7
At5g62090.2 68418.m07793 expressed protein 29 2.2
At5g62090.1 68418.m07792 expressed protein 29 2.2
At1g26150.1 68414.m03192 protein kinase family protein similar t... 29 2.2
At3g13850.1 68416.m01749 LOB domain family protein / lateral org... 29 3.0
At5g28615.1 68418.m03493 hypothetical protein 28 3.9
At3g51230.1 68416.m05608 hypothetical protein 28 3.9
At2g32310.1 68415.m03950 expressed protein 28 3.9
At2g40470.1 68415.m04994 LOB domain protein 15 / lateral organ b... 28 5.2
At5g53060.1 68418.m06592 KH domain-containing protein 27 6.8
At4g02560.1 68417.m00350 homeobox protein LUMINIDEPENDENS (LD) i... 27 6.8
At3g60330.1 68416.m06743 ATPase, plasma membrane-type, putative ... 27 6.8
At3g60240.1 68416.m06732 MIF4G domain-containing protein / MA3 d... 27 6.8
At1g02690.2 68414.m00220 importin alpha-2 subunit, putative simi... 27 6.8
At1g02690.1 68414.m00219 importin alpha-2 subunit, putative simi... 27 6.8
At5g22260.1 68418.m02593 male sterility 1 protein, putative (MS1... 27 9.0
At3g24535.1 68416.m03081 expressed protein ; expression supporte... 27 9.0
At2g30290.1 68415.m03687 vacuolar sorting receptor, putative sim... 27 9.0
At1g66170.1 68414.m07511 PHD finger family protein (MMD1) contai... 27 9.0
>At1g15825.1 68414.m01899 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 126
Score = 30.7 bits (66), Expect = 0.73
Identities = 22/52 (42%), Positives = 24/52 (46%)
Frame = +1
Query: 100 FSTSLTAPAENNMPVWELQQPNITGVQESPFRLQLNPTPQTTPMLPNFQHPP 255
F LT PAE P+ L P VQE P L PT Q P +P F PP
Sbjct: 8 FPPILTPPAEEFPPI--LPPP----VQEIPPVFTLPPTVQDPPTIPVFSTPP 53
>At4g25940.1 68417.m03731 epsin N-terminal homology (ENTH)
domain-containing protein contains Pfam PF01417: ENTH
domain. ENTH (Epsin N-terminal homology) domain; similar
to Chain B, Crystal Structure Of N-Terminal Domain Of
Drosophila Ap180 (GP:13399617) [Drosophila
melanogaster]; supporting cDNA
gi|20465326|gb|AY096427.1|
Length = 601
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 52 TSAISNPNIMQMNNIPFSTSLTAPAENNMPVWELQQPNITGVQESPF 192
T+A NP MQ + S ++ P M + + QQ +T + +SP+
Sbjct: 502 TAAPPNPFQMQQDPFAMSNNIAPPTNVQMAMQQQQQQQMTMMHQSPY 548
>At1g01900.1 68414.m00107 subtilase family protein contains
similarity to cucumisin-like serine protease GB:AAC18851
GI:3176874 from [Arabidopsis thaliana]
Length = 774
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -1
Query: 533 GRRVPLTALFADRLH*XGPMVXXPEVAXPDVXGKG 429
G P+ A F+ R GP V PE+A PD+ G
Sbjct: 490 GATAPMVAAFSSR----GPSVAGPEIAKPDIAAPG 520
>At5g62090.2 68418.m07793 expressed protein
Length = 816
Score = 29.1 bits (62), Expect = 2.2
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Frame = +1
Query: 10 PRQPNAEKTHMQAQTSAISNP--NIMQMNNIPFSTSLTAPAENNMPVWELQQPNI----- 168
P N+ M + S I+ P N+ ++P S A A N ++Q ++
Sbjct: 581 PPDRNSLNKLMALRNSGINIPMNNMSGQGSLPGSAQAAAFALTNYQSMLMKQNHLNSDLN 640
Query: 169 -TGVQESPFRLQ-LNPTPQ-TTPMLPNFQHPPT 258
T +Q+ P R + +P+ Q T+P+LP F H P+
Sbjct: 641 NTTIQQEPSRNRSASPSYQGTSPLLPGFVHSPS 673
>At5g62090.1 68418.m07792 expressed protein
Length = 816
Score = 29.1 bits (62), Expect = 2.2
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Frame = +1
Query: 10 PRQPNAEKTHMQAQTSAISNP--NIMQMNNIPFSTSLTAPAENNMPVWELQQPNI----- 168
P N+ M + S I+ P N+ ++P S A A N ++Q ++
Sbjct: 581 PPDRNSLNKLMALRNSGINIPMNNMSGQGSLPGSAQAAAFALTNYQSMLMKQNHLNSDLN 640
Query: 169 -TGVQESPFRLQ-LNPTPQ-TTPMLPNFQHPPT 258
T +Q+ P R + +P+ Q T+P+LP F H P+
Sbjct: 641 NTTIQQEPSRNRSASPSYQGTSPLLPGFVHSPS 673
>At1g26150.1 68414.m03192 protein kinase family protein similar to
Pto kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 29.1 bits (62), Expect = 2.2
Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +1
Query: 10 PRQPNAEKTHMQAQTSAISNPNIMQMNNIPFSTSLTAPAENNMPVWELQQPNITGVQESP 189
P QP+ + + T +N N + N P +S + P E P+ + P
Sbjct: 28 PPQPSFPGDNATSPTREPTNGNPPETTNTPAQSSPPPETPLSSPPPEPSPPSPSLTGPPP 87
Query: 190 FRLQLNPTPQTT--PMLPNFQHPPTN 261
+ ++P P+ + P LP PP N
Sbjct: 88 TTIPVSPPPEPSPPPPLPTEAPPPAN 113
>At3g13850.1 68416.m01749 LOB domain family protein / lateral organ
boundaries domain family protein (LBD22) identical to
SP|Q9LRW1 Putative LOB domain protein 22 {Arabidopsis
thaliana}; similar to lateral organ boundaries (LOB)
domain-containing proteins from Arabidopsis thaliana
Length = 268
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/77 (23%), Positives = 35/77 (45%)
Frame = +1
Query: 13 RQPNAEKTHMQAQTSAISNPNIMQMNNIPFSTSLTAPAENNMPVWELQQPNITGVQESPF 192
++P+ + + +S S+ ++ N+IP++ L E N + N +G+QE +
Sbjct: 149 QEPHIQMQEQEDLSSFSSSCDLNNNNSIPYNYPLNHIQEPNQQQYCSSGNNFSGLQEDMW 208
Query: 193 RLQLNPTPQTTPMLPNF 243
LQL + M F
Sbjct: 209 CLQLQDSSTIVNMKAGF 225
>At5g28615.1 68418.m03493 hypothetical protein
Length = 149
Score = 28.3 bits (60), Expect = 3.9
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 218 KQHQCCQTSNIRPRT-NAIPTSVAYSHTQRPEIFCPAHTMSSAITKLRIYTAAATVTDN 391
K H NI P N I + S+ + + P++ S+A T L +YT AATV N
Sbjct: 59 KNHIINMLKNILPNPENMIESQHDDSYLWKADHHAPSNIFSAAKTWLALYTFAATVPWN 117
>At3g51230.1 68416.m05608 hypothetical protein
Length = 230
Score = 28.3 bits (60), Expect = 3.9
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +1
Query: 184 SPFRLQLNPTPQTTPMLPNF 243
SP RL L PTP TP PNF
Sbjct: 125 SPMRL-LAPTPANTPQFPNF 143
>At2g32310.1 68415.m03950 expressed protein
Length = 325
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1
Query: 148 ELQQPNITGVQESPFRLQLNPTPQTTPMLPNFQHPP 255
E + P + G E+ L +NP P+ P +Q PP
Sbjct: 23 EPETPALLGDAETTLPLNINPRPEPVPSQFQYQPPP 58
>At2g40470.1 68415.m04994 LOB domain protein 15 / lateral organ
boundaries domain protein 15 (LBD15) identical to
SP|Q8L5T5 LOB domain protein 15 {Arabidopsis thaliana};
similar to ASYMMETRIC LEAVES2 [Arabidopsis thaliana]
GI:19918971
Length = 224
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +1
Query: 208 PTPQ--TTPMLPNFQHPPTNKCNTDLSCLFTYTTT*DL 315
P PQ TTP P HPP+ SC+F+ TT DL
Sbjct: 179 PPPQRPTTPPQPTTAHPPSPS-----SCVFSQPTTRDL 211
>At5g53060.1 68418.m06592 KH domain-containing protein
Length = 652
Score = 27.5 bits (58), Expect = 6.8
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +1
Query: 76 IMQMNNIPFSTSLTAPAENNMPVWELQQPNIT-GVQESPFRLQLNPTPQTTPMLPNFQ 246
+ Q P STS T P E V E+ N T +E P LN Q + +LP F+
Sbjct: 488 LSQKETPPASTSTTGPLEGVAGVMEVASSNNTIQSREGPTSSNLN-LQQVSTILPQFK 544
>At4g02560.1 68417.m00350 homeobox protein LUMINIDEPENDENS (LD)
identical to Homeobox protein LUMINIDEPENDENS
(Swiss-Prot:Q38796) [Arabidopsis thaliana]
Length = 953
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/56 (25%), Positives = 29/56 (51%)
Frame = +3
Query: 162 QYHRSTRESLPTSAESDTPNNTNVAKLPTSAHEQMQYRPQLPIHIHNDLRSFVPLT 329
Q+H++ +S+P A S N+ +A T +Q +P+L ++H + P++
Sbjct: 798 QWHQTNEQSIPRHAPSAYSNSITLAH--TEREQQQYMQPKLHHNLHFQQQQQQPIS 851
>At3g60330.1 68416.m06743 ATPase, plasma membrane-type, putative /
proton pump, putative similar to P-type
H(+)-transporting ATPase from Nicotiana plumbaginifolia
[SP|Q08435, SP|Q08436], Lycopersicon esculentum
[GI:5901757, SP|P22180], Solanum tuberosum [GI:435003];
contains InterPro accession IPR001757: ATPase, E1-E2
type
Length = 961
Score = 27.5 bits (58), Expect = 6.8
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -2
Query: 277 GRYCICSWADVGSLATLVLFGVSDSA-EVGRDSLVLL*YWAVEAPTPAYCSL 125
G +CICS A ++ +V++G+ VG D+L++L + P S+
Sbjct: 247 GNFCICSIAVGMAIEIVVIYGLQKRGYRVGIDNLLVLLIGGIPIAMPTVLSV 298
>At3g60240.1 68416.m06732 MIF4G domain-containing protein / MA3
domain-containing protein similar to eukaryotic protein
synthesis initiation factor [Homo sapiens] GI:3941724;
contains Pfam profiles PF02854: MIF4G domain, PF02847:
MA3 domain
Length = 1544
Score = 27.5 bits (58), Expect = 6.8
Identities = 21/73 (28%), Positives = 28/73 (38%), Gaps = 2/73 (2%)
Frame = +1
Query: 43 QAQTSAISNPNIMQMNNIPFSTSLTAPAENNMPVWELQQP-NITGVQ-ESPFRLQLNPTP 216
Q Q S I+N + + T + P P +Q P T Q P L + TP
Sbjct: 64 QTQKSPITNIRMPSVQTPYQHTQVPHPVHFGGPNMHMQTPVTATSFQMPMPMALSMGNTP 123
Query: 217 QTTPMLPNFQHPP 255
Q P + HPP
Sbjct: 124 QIPPQVFYQGHPP 136
>At1g02690.2 68414.m00220 importin alpha-2 subunit, putative similar
to importin alpha-2 subunit (Karyopherin alpha-2
subunit) (KAP alpha) SP:O04294 from [Arabidopsis
thaliana]
Length = 539
Score = 27.5 bits (58), Expect = 6.8
Identities = 23/81 (28%), Positives = 35/81 (43%)
Frame = +1
Query: 22 NAEKTHMQAQTSAISNPNIMQMNNIPFSTSLTAPAENNMPVWELQQPNITGVQESPFRLQ 201
N + ++Q + NP++ FS+SL P E + E Q I GV LQ
Sbjct: 39 NKREENLQKKRREGFNPSMASQPGQDFSSSL--PTETRL---ENIQQMIAGVMSEDRDLQ 93
Query: 202 LNPTPQTTPMLPNFQHPPTNK 264
L T +L ++PP N+
Sbjct: 94 LEATASFRRLLSIERNPPINE 114
>At1g02690.1 68414.m00219 importin alpha-2 subunit, putative similar
to importin alpha-2 subunit (Karyopherin alpha-2
subunit) (KAP alpha) SP:O04294 from [Arabidopsis
thaliana]
Length = 538
Score = 27.5 bits (58), Expect = 6.8
Identities = 23/81 (28%), Positives = 35/81 (43%)
Frame = +1
Query: 22 NAEKTHMQAQTSAISNPNIMQMNNIPFSTSLTAPAENNMPVWELQQPNITGVQESPFRLQ 201
N + ++Q + NP++ FS+SL P E + E Q I GV LQ
Sbjct: 39 NKREENLQKKRREGFNPSMASQPGQDFSSSL--PTETRL---ENIQQMIAGVMSEDRDLQ 93
Query: 202 LNPTPQTTPMLPNFQHPPTNK 264
L T +L ++PP N+
Sbjct: 94 LEATASFRRLLSIERNPPINE 114
>At5g22260.1 68418.m02593 male sterility 1 protein, putative (MS1)
identical to male sterility 1 protein [Arabidopsis
thaliana] gi|15554513|emb|CAC69663 PMID:11696184;
contains Pfam profile PF00628: PHD-finger; identical to
cDNA male sterility 1 protein (ms1 gene) GI:15554514
Length = 672
Score = 27.1 bits (57), Expect = 9.0
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = -3
Query: 300 CVCE*ATEVGIAFVRGRMLEVWQHWCCLGCRIQLKSEGTLL-YSCDIGLLKL 148
C C E G V + EVWQH C+G + + L SCD L+ L
Sbjct: 617 CECGATEEDGERMVCCDICEVWQHTRCVGVQHNEEVPRIFLCQSCDQHLIPL 668
>At3g24535.1 68416.m03081 expressed protein ; expression supported
by MPSS
Length = 188
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +3
Query: 165 YHR--STRESLPTSAESDTPNNTNVAKLPTSAHEQMQYRPQ 281
YH+ T + T+ +D PN+ + +S H+Q Q +P+
Sbjct: 31 YHKLPKTPNNTSTNINNDHPNSNIITSSSSSIHKQFQPKPK 71
>At2g30290.1 68415.m03687 vacuolar sorting receptor, putative
similar to vacuolar sorting receptor homolog
[Arabidopsis thaliana] GI:1737218
Length = 625
Score = 27.1 bits (57), Expect = 9.0
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = -1
Query: 254 GGCWKFGNIGVVWGVGFS*SRKGLSCTPVILG 159
GGCWK +G + KG C P +G
Sbjct: 477 GGCWKQTQMGKTYSACRDDHSKGCKCPPGFIG 508
>At1g66170.1 68414.m07511 PHD finger family protein (MMD1) contains
Pfam profile: PF00628: PHD-finger
Length = 704
Score = 27.1 bits (57), Expect = 9.0
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -3
Query: 303 RCVCE*ATEVGIAFVRGRMLEVWQHWCCLG 214
+C+C + G + + EVWQH C G
Sbjct: 608 KCICRARDDDGERMISCDVCEVWQHTRCCG 637
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,714,806
Number of Sequences: 28952
Number of extensions: 243512
Number of successful extensions: 867
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 866
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1131744440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -