Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0235.Seq
         (697 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ099385-1|AAZ13761.1|  181|Homo sapiens ADP-ribosylation-like f...    30   9.1  
BC094839-1|AAH94839.1|  352|Homo sapiens ADP-ribosylation-like f...    30   9.1  
BC015909-1|AAH15909.2|  360|Homo sapiens ADP-ribosylation-like f...    30   9.1  
BC015569-1|AAH15569.1|  215|Homo sapiens ARL6IP4 protein protein.      30   9.1  
BC001958-1|AAH01958.1|  218|Homo sapiens ARL6IP4 protein protein.      30   9.1  
AF267748-1|AAF76892.1|  121|Homo sapiens HSVI binding protein pr...    30   9.1  
AB035384-1|BAA94744.1|  218|Homo sapiens SRp25 nuclear protein p...    30   9.1  

>DQ099385-1|AAZ13761.1|  181|Homo sapiens ADP-ribosylation-like
           factor 6 interacting protein 4 protein.
          Length = 181

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 18/38 (47%), Positives = 19/38 (50%)
 Frame = +1

Query: 409 HYGFRKKSRPMENSRGEGRWAPKKKXXKRXSV*RNLKA 522
           H G RK+SR    SRG G    KKK  K  S  RN  A
Sbjct: 3   HVGSRKRSRSRSRSRGRGSEKRKKKSRKDTS--RNCSA 38


>BC094839-1|AAH94839.1|  352|Homo sapiens ADP-ribosylation-like
           factor 6 interacting protein 4 protein.
          Length = 352

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 18/38 (47%), Positives = 19/38 (50%)
 Frame = +1

Query: 409 HYGFRKKSRPMENSRGEGRWAPKKKXXKRXSV*RNLKA 522
           H G RK+SR    SRG G    KKK  K  S  RN  A
Sbjct: 126 HVGSRKRSRSRSRSRGRGSEKRKKKSRKDTS--RNCSA 161


>BC015909-1|AAH15909.2|  360|Homo sapiens ADP-ribosylation-like
           factor 6 interacting protein 4 protein.
          Length = 360

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 18/38 (47%), Positives = 19/38 (50%)
 Frame = +1

Query: 409 HYGFRKKSRPMENSRGEGRWAPKKKXXKRXSV*RNLKA 522
           H G RK+SR    SRG G    KKK  K  S  RN  A
Sbjct: 126 HVGSRKRSRSRSRSRGRGSEKRKKKSRKDTS--RNCSA 161


>BC015569-1|AAH15569.1|  215|Homo sapiens ARL6IP4 protein protein.
          Length = 215

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 18/38 (47%), Positives = 19/38 (50%)
 Frame = +1

Query: 409 HYGFRKKSRPMENSRGEGRWAPKKKXXKRXSV*RNLKA 522
           H G RK+SR    SRG G    KKK  K  S  RN  A
Sbjct: 3   HVGSRKRSRSRSRSRGRGSEKRKKKSRKDTS--RNCSA 38


>BC001958-1|AAH01958.1|  218|Homo sapiens ARL6IP4 protein protein.
          Length = 218

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 18/38 (47%), Positives = 19/38 (50%)
 Frame = +1

Query: 409 HYGFRKKSRPMENSRGEGRWAPKKKXXKRXSV*RNLKA 522
           H G RK+SR    SRG G    KKK  K  S  RN  A
Sbjct: 3   HVGSRKRSRSRSRSRGRGSEKRKKKSRKDTS--RNCSA 38


>AF267748-1|AAF76892.1|  121|Homo sapiens HSVI binding protein
           protein.
          Length = 121

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 18/38 (47%), Positives = 19/38 (50%)
 Frame = +1

Query: 409 HYGFRKKSRPMENSRGEGRWAPKKKXXKRXSV*RNLKA 522
           H G RK+SR    SRG G    KKK  K  S  RN  A
Sbjct: 3   HVGSRKRSRSRSRSRGRGSEKRKKKSRKDTS--RNCSA 38


>AB035384-1|BAA94744.1|  218|Homo sapiens SRp25 nuclear protein
           protein.
          Length = 218

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 18/38 (47%), Positives = 19/38 (50%)
 Frame = +1

Query: 409 HYGFRKKSRPMENSRGEGRWAPKKKXXKRXSV*RNLKA 522
           H G RK+SR    SRG G    KKK  K  S  RN  A
Sbjct: 3   HVGSRKRSRSRSRSRGRGSEKRKKKSRKDTS--RNCSA 38


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,384,443
Number of Sequences: 237096
Number of extensions: 2313093
Number of successful extensions: 3371
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3371
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)