Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0233.Seq
         (797 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    24   1.2  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   2.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.6  

>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 12/46 (26%), Positives = 22/46 (47%)
 Frame = -3

Query: 216 RNSL*RGTCAWYVVRYGGVECARSSPNVADTVLFTIIIQVITNLNF 79
           +N+  + T  W  +RY      + S  + + + + II+   TNL F
Sbjct: 131 KNARVKNTALWKQLRYEHYRLYQLSVLIDNNMSYIIIVSFATNLYF 176


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -2

Query: 214 KFLMTRYLCLVRGEIRRRGVRKVITKR 134
           K    +YL  V+ E++ RGV  +I K+
Sbjct: 164 KLKKMKYLVEVQDEVKPRGVLNIIPKQ 190


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -2

Query: 475 YFAFVILSLYTLFYL 431
           Y+AF+I +++ LF L
Sbjct: 117 YYAFIIFTVHLLFLL 131



 Score = 21.4 bits (43), Expect = 8.6
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 475 YFAFVILSLYTLFY 434
           Y AF+I +++ LFY
Sbjct: 216 YSAFIIFTIHLLFY 229


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,278
Number of Sequences: 336
Number of extensions: 5215
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)