Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0233.Seq
         (797 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0402 - 2934074-2937217                                           31   1.1  
02_05_0077 + 25645730-25645993,25647172-25647648,25648027-256482...    30   2.5  
02_01_0403 - 2938242-2941334                                           30   2.5  
08_01_0906 + 8933230-8933797,8933894-8934543,8937956-8938615,893...    29   3.2  
02_03_0231 - 16636377-16636403,16636590-16636645,16636793-166368...    29   4.3  
05_02_0127 - 6872780-6872835,6872943-6873026,6873501-6873784,687...    28   9.9  
02_05_0686 - 30900748-30902167,30903442-30904742                       28   9.9  

>02_01_0402 - 2934074-2937217
          Length = 1047

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = +2

Query: 278 NVTDLRHRLGGIQNQLNEATRHCQDISYLENISKPSSNVTELKQVPSSSKH 430
           N+T LR      + QL+E   + + +S+L  +    +N+T   Q+  SSK+
Sbjct: 373 NLTALRLSFNNFRGQLSEKIGNLKSLSFLSLVKNSLANITSTLQMLQSSKN 423


>02_05_0077 +
           25645730-25645993,25647172-25647648,25648027-25648237,
           25648407-25648564,25648641-25648711,25648829-25648934,
           25649008-25649094,25649701-25650252,25650337-25650403,
           25650971-25651104,25651175-25651228,25651376-25651472,
           25652007-25652212,25652287-25652367,25652543-25652608,
           25653025-25653098,25653766-25653871
          Length = 936

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = -3

Query: 621 PSGPDV--WLSTRDTSSATVNGHHDP*LWGGLIHWESE 514
           PS PDV  +L + D + A VNG+ DP  + G+   E E
Sbjct: 417 PSAPDVGNYLISEDENVAAVNGNRDPLAFDGMADAEVE 454


>02_01_0403 - 2938242-2941334
          Length = 1030

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = +2

Query: 278 NVTDLRHRLGGIQNQLNEATRHCQDISYLENISKPSSNVTELKQVPSSSKH 430
           N+T LR    G   QL+E   + Q +S+L  ++   +N+T   QV  S ++
Sbjct: 357 NLTALRLSYNGFHGQLSERIGNLQYLSFLSIVNISLTNITRTIQVLQSCRN 407


>08_01_0906 +
           8933230-8933797,8933894-8934543,8937956-8938615,
           8939751-8939817,8940421-8940724,8942993-8942996,
           8944539-8946449
          Length = 1387

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = +2

Query: 200 RHKEFLSTCIG--YFITTIHKISSSIAINVTDLRHRLGGIQNQLNEATRH 343
           RH     +C+G  Y ++ + K S+  ++ V       G ++  +NE T H
Sbjct: 373 RHHGIACSCVGHPYRVSELEKFSADYSVRVVFKEDAAGKVEGTVNEETAH 422


>02_03_0231 -
           16636377-16636403,16636590-16636645,16636793-16636853,
           16637590-16637649,16638007-16638096,16638775-16638906,
           16639016-16639293,16639916-16639949,16640036-16640105,
           16641170-16641282,16641654-16641836,16642106-16642283,
           16642958-16643142,16643347-16643477,16643620-16643772,
           16643849-16643995,16644662-16644737
          Length = 657

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 17/57 (29%), Positives = 26/57 (45%)
 Frame = +2

Query: 386 SNVTELKQVPSSSKHQIEQSVQGQYNESEVKYSTKHRGN*LPSSDSQWIRPPQSQGS 556
           S+++E  +VPSSS H  E S  GQ  +S          +    S  +++   Q  GS
Sbjct: 419 SSISEDLEVPSSSSHASEPSSSGQAKKSSESLPADSSLSRKVPSSGEYVNSSQGPGS 475


>05_02_0127 -
           6872780-6872835,6872943-6873026,6873501-6873784,
           6874403-6874568,6876724-6876906,6877400-6877505,
           6877620-6877775,6878882-6878899
          Length = 350

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +2

Query: 95  IT*MIIVKSTVSATFGDDLAHSTP 166
           I+ M +  STV+ATFGDDL +  P
Sbjct: 248 ISGMDVDASTVNATFGDDLGNGGP 271


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 17/40 (42%), Positives = 17/40 (42%)
 Frame = -3

Query: 792 PGGPGPSPNPVAYPGGKFRFPTTVFPGGQISRFLRTPEKP 673
           P   GPSP P   PGGK   P    P G  SR    P  P
Sbjct: 357 PPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRPPAAPGVP 396


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,606,557
Number of Sequences: 37544
Number of extensions: 587498
Number of successful extensions: 1276
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1274
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)