Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0233.Seq
(797 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23455-5|AAC46535.1| 305|Caenorhabditis elegans Hypothetical pr... 33 0.31
Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z96102-6|CAJ85756.1| 1062|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z81027-7|CAJ85745.1| 1062|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical pr... 29 2.9
U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonin... 29 2.9
U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonin... 29 2.9
AC084153-13|AAK84583.1| 123|Caenorhabditis elegans Hypothetical... 29 2.9
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 28 8.9
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 28 8.9
U39855-3|AAA81082.1| 467|Caenorhabditis elegans Patterned expre... 28 8.9
>U23455-5|AAC46535.1| 305|Caenorhabditis elegans Hypothetical
protein F55E10.6 protein.
Length = 305
Score = 32.7 bits (71), Expect = 0.31
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -3
Query: 705 ISRFLRTPEKPEXHRGPYGXPLN*SFFFPSGPDVWLSTRD 586
+ F++ EK +RG +G N SGPD WLS +D
Sbjct: 73 VKEFVKLVEKTVENRGLWGVVANAGILGNSGPDDWLSAQD 112
>Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical
protein F33A8.9 protein.
Length = 346
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/52 (40%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = -3
Query: 792 PGGPGPSPNPVAYPGGKFRFPTTVFPG--GQISRFLRTPEKPEXHRGPYGXP 643
PG PGP P P PGG PG Q SR + P P GP G P
Sbjct: 237 PGPPGP-PGPPGNPGGIGPRGPPGDPGIMTQDSRGVEGPSGPSGPPGPMGFP 287
>Z96102-6|CAJ85756.1| 1062|Caenorhabditis elegans Hypothetical
protein H39E23.1c protein.
Length = 1062
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 299 RLGGIQNQLNEATRHCQDISYLENIS-KPSSNVTELKQVP 415
R GG+Q + +R IS L+ S KPSSN T++ Q+P
Sbjct: 473 RHGGVQMRAQPTSRQAT-ISLLQPPSYKPSSNTTQIAQIP 511
>Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical
protein H39E23.1b protein.
Length = 1096
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 299 RLGGIQNQLNEATRHCQDISYLENIS-KPSSNVTELKQVP 415
R GG+Q + +R IS L+ S KPSSN T++ Q+P
Sbjct: 507 RHGGVQMRAQPTSRQAT-ISLLQPPSYKPSSNTTQIAQIP 545
>Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical
protein H39E23.1a protein.
Length = 1192
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 299 RLGGIQNQLNEATRHCQDISYLENIS-KPSSNVTELKQVP 415
R GG+Q + +R IS L+ S KPSSN T++ Q+P
Sbjct: 603 RHGGVQMRAQPTSRQAT-ISLLQPPSYKPSSNTTQIAQIP 641
>Z81027-7|CAJ85745.1| 1062|Caenorhabditis elegans Hypothetical
protein H39E23.1c protein.
Length = 1062
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 299 RLGGIQNQLNEATRHCQDISYLENIS-KPSSNVTELKQVP 415
R GG+Q + +R IS L+ S KPSSN T++ Q+P
Sbjct: 473 RHGGVQMRAQPTSRQAT-ISLLQPPSYKPSSNTTQIAQIP 511
>Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical
protein H39E23.1b protein.
Length = 1096
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 299 RLGGIQNQLNEATRHCQDISYLENIS-KPSSNVTELKQVP 415
R GG+Q + +R IS L+ S KPSSN T++ Q+P
Sbjct: 507 RHGGVQMRAQPTSRQAT-ISLLQPPSYKPSSNTTQIAQIP 545
>Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical
protein H39E23.1a protein.
Length = 1192
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 299 RLGGIQNQLNEATRHCQDISYLENIS-KPSSNVTELKQVP 415
R GG+Q + +R IS L+ S KPSSN T++ Q+P
Sbjct: 603 RHGGVQMRAQPTSRQAT-ISLLQPPSYKPSSNTTQIAQIP 641
>U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1096
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 299 RLGGIQNQLNEATRHCQDISYLENIS-KPSSNVTELKQVP 415
R GG+Q + +R IS L+ S KPSSN T++ Q+P
Sbjct: 507 RHGGVQMRAQPTSRQAT-ISLLQPPSYKPSSNTTQIAQIP 545
>U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1192
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 299 RLGGIQNQLNEATRHCQDISYLENIS-KPSSNVTELKQVP 415
R GG+Q + +R IS L+ S KPSSN T++ Q+P
Sbjct: 603 RHGGVQMRAQPTSRQAT-ISLLQPPSYKPSSNTTQIAQIP 641
>AC084153-13|AAK84583.1| 123|Caenorhabditis elegans Hypothetical
protein Y22D7AL.1 protein.
Length = 123
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -3
Query: 300 LCLKSVTLIAILELILWMVVMKYPMHVERNSL*RGTCAWYVVRY 169
LC +V +I ++ ++L V K P E +S R T W+ + Y
Sbjct: 40 LCCIAVFIILVIIIVLIFVFRKMPTPTESSSTLRKTLWWFFIFY 83
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/47 (36%), Positives = 19/47 (40%)
Frame = -2
Query: 796 NPGGTRAKSEPGSLPRWEI*VPNNGFSGGPNFPVFKDPXKTGXPSGP 656
NPG K EPG + N G SG P P K P+GP
Sbjct: 257 NPGEKGDKGEPGEGGQRGY-PGNGGLSGQPGLPGMKGEKGLSGPAGP 302
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/47 (36%), Positives = 19/47 (40%)
Frame = -2
Query: 796 NPGGTRAKSEPGSLPRWEI*VPNNGFSGGPNFPVFKDPXKTGXPSGP 656
NPG K EPG + N G SG P P K P+GP
Sbjct: 257 NPGEKGDKGEPGEGGQRGY-PGNGGLSGQPGLPGMKGEKGLSGPAGP 302
>U39855-3|AAA81082.1| 467|Caenorhabditis elegans Patterned
expression site protein 8 protein.
Length = 467
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = -2
Query: 277 DRDTGAYL-MDGCDEVPNARRKKFLMTRYLCLVRGEIRRRGVRKVITKRR*YSAFHNN 107
+RD G MDG DEV R L +V ++R + +T+ R Y H+N
Sbjct: 364 ERDMGRVEPMDGFDEVETRERTYCLSDDDQEIVEKNVKRTHTTRYVTESREYDQDHDN 421
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,668,676
Number of Sequences: 27780
Number of extensions: 518850
Number of successful extensions: 1246
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1241
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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