Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0232.Seq
(399 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1919.03c |||AMP-activated protein kinase beta subunit |Schiz... 26 2.5
SPCC23B6.01c |||oxysterol binding protein |Schizosaccharomyces p... 25 3.3
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 25 4.3
SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein interm... 25 4.3
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 25 4.3
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 25 4.3
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 25 4.3
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 25 4.3
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 25 4.3
SPBC646.12c |gap1|src1, sar1|GTPase activating protein Gap1|Schi... 25 4.3
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 25 4.3
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 25 4.3
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 25 4.3
SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosacchar... 25 4.3
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 25 4.3
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 25 4.3
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 25 5.7
SPCC1393.06c |||rRNA processing protein Ipi1|Schizosaccharomyces... 24 7.6
SPBC1348.10c |||phospholipase |Schizosaccharomyces pombe|chr 2||... 24 7.6
SPAC6B12.16 |meu26||conserved fungal protein|Schizosaccharomyces... 24 7.6
SPBC32F12.02 |rec14||recombination protein Rec14|Schizosaccharom... 24 7.6
SPAC977.09c |||phospholipase |Schizosaccharomyces pombe|chr 1|||... 24 7.6
>SPCC1919.03c |||AMP-activated protein kinase beta subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 298
Score = 25.8 bits (54), Expect = 2.5
Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = -1
Query: 372 ETRKAKTVCPWNG-CWQTVFSWKGLGELI 289
+T KT P++G C T+ W+G GE++
Sbjct: 84 QTSGKKTHQPYSGPCVPTIIRWRGGGEVV 112
>SPCC23B6.01c |||oxysterol binding protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 489
Score = 25.4 bits (53), Expect = 3.3
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Frame = +2
Query: 197 R*RGASK-LFVLIGQKHT---LMPKSPSKDPTLGTINSPSPFHEKTVCQQP 337
R RG K L ++G+ T P S SKDP L ++ + + + VC P
Sbjct: 100 RPRGVKKPLNPILGETFTGFWKFPPSNSKDPNLQKLHGIAVYAAEQVCHHP 150
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.0 bits (52), Expect = 4.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 218 TWKPHVSEIRESGNNLFASPTLM 150
TW H+S +++S NN S T M
Sbjct: 1106 TWVDHISLVQQSYNNAIHSATQM 1128
>SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein
intermediate chain Dic1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 544
Score = 25.0 bits (52), Expect = 4.3
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +2
Query: 218 LFVLIGQKHTLMPKSPSKDPTLGTINSPSPFHEKTVCQQPFQGHTVL 358
L ++ Q+ P+S K + T+ PSPFH + + + G L
Sbjct: 224 LAIVWNQRWKNSPESVLKARSEITVCKPSPFHPQLIAGGAYNGQVFL 270
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 25.0 bits (52), Expect = 4.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 218 TWKPHVSEIRESGNNLFASPTLM 150
TW H+S +++S NN S T M
Sbjct: 1106 TWVDHISLVQQSYNNAIHSATQM 1128
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.0 bits (52), Expect = 4.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 218 TWKPHVSEIRESGNNLFASPTLM 150
TW H+S +++S NN S T M
Sbjct: 1106 TWVDHISLVQQSYNNAIHSATQM 1128
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.0 bits (52), Expect = 4.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 218 TWKPHVSEIRESGNNLFASPTLM 150
TW H+S +++S NN S T M
Sbjct: 1106 TWVDHISLVQQSYNNAIHSATQM 1128
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 25.0 bits (52), Expect = 4.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 218 TWKPHVSEIRESGNNLFASPTLM 150
TW H+S +++S NN S T M
Sbjct: 1106 TWVDHISLVQQSYNNAIHSATQM 1128
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.0 bits (52), Expect = 4.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 218 TWKPHVSEIRESGNNLFASPTLM 150
TW H+S +++S NN S T M
Sbjct: 1106 TWVDHISLVQQSYNNAIHSATQM 1128
>SPBC646.12c |gap1|src1, sar1|GTPase activating protein
Gap1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 766
Score = 25.0 bits (52), Expect = 4.3
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Frame = +1
Query: 109 SLDDYPQIFHRWCPINVGLANRLFP---DSRI-SLTWGFQVIR 225
S+D+ P C + L NRLFP DS I SL GF +R
Sbjct: 298 SIDEIPYGIRWVCKLIRNLTNRLFPSISDSTICSLIGGFFFLR 340
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.0 bits (52), Expect = 4.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 218 TWKPHVSEIRESGNNLFASPTLM 150
TW H+S +++S NN S T M
Sbjct: 1106 TWVDHISLVQQSYNNAIHSATQM 1128
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 25.0 bits (52), Expect = 4.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 218 TWKPHVSEIRESGNNLFASPTLM 150
TW H+S +++S NN S T M
Sbjct: 1106 TWVDHISLVQQSYNNAIHSATQM 1128
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 25.0 bits (52), Expect = 4.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 218 TWKPHVSEIRESGNNLFASPTLM 150
TW H+S +++S NN S T M
Sbjct: 1106 TWVDHISLVQQSYNNAIHSATQM 1128
>SPCC1672.07 |||U3 snoRNP-associated protein Utp21
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 902
Score = 25.0 bits (52), Expect = 4.3
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +1
Query: 157 VGLANRLFPDSRISLTWGFQVIRAHWAKTHIDA 255
V +++F R + W V + H TH+DA
Sbjct: 91 VAAGSKIFAYKRGKIIWDIDVEQEHGTVTHLDA 123
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.0 bits (52), Expect = 4.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 218 TWKPHVSEIRESGNNLFASPTLM 150
TW H+S +++S NN S T M
Sbjct: 1106 TWVDHISLVQQSYNNAIHSATQM 1128
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 25.0 bits (52), Expect = 4.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 218 TWKPHVSEIRESGNNLFASPTLM 150
TW H+S +++S NN S T M
Sbjct: 1106 TWVDHISLVQQSYNNAIHSATQM 1128
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 24.6 bits (51), Expect = 5.7
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +2
Query: 296 SPSPFHEKTVCQQPFQGHTVLAFRVSNPP 382
+PS + E +C+Q F GH V+ P
Sbjct: 494 APSMYKEGGICKQTFTGHKDFILSVTVSP 522
>SPCC1393.06c |||rRNA processing protein Ipi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 408
Score = 24.2 bits (50), Expect = 7.6
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 53 RRTRLLAKSNYFVLNHSKLLWTTTPKFFIVGAPL 154
+R L K +VL+H+ +L T+T + +PL
Sbjct: 73 QRQETLEKLTQYVLSHTSILTTSTALLLKLTSPL 106
>SPBC1348.10c |||phospholipase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 673
Score = 24.2 bits (50), Expect = 7.6
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = -3
Query: 364 ESQNGVPLEWLLANSFFMEGAWGIDCSKGWVFGWAFGHQCV 242
E + +PL LL F++ + ID + +GW G V
Sbjct: 429 EDRENIPLWPLLHPQRFVDVVFAIDSTYNDPYGWPLGSSIV 469
>SPAC6B12.16 |meu26||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 344
Score = 24.2 bits (50), Expect = 7.6
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +3
Query: 183 RFPYLANVGLPSYSCSLGKNT 245
+ P+ +++ PS +CSL KNT
Sbjct: 37 KLPHQSDLEEPSSACSLSKNT 57
>SPBC32F12.02 |rec14||recombination protein
Rec14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 24.2 bits (50), Expect = 7.6
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -2
Query: 245 CVFAQ*ARITWKPHVSEIRESGNN 174
C F Q + W P +E R+ GNN
Sbjct: 77 CGFGQDVYV-WNPETNEFRDLGNN 99
>SPAC977.09c |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 673
Score = 24.2 bits (50), Expect = 7.6
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = -3
Query: 364 ESQNGVPLEWLLANSFFMEGAWGIDCSKGWVFGWAFGHQCV 242
E + +PL LL F++ + ID + +GW G V
Sbjct: 429 EDRENIPLWPLLHPQRFVDVVFAIDSTYNDPYGWPLGSSIV 469
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,078,811
Number of Sequences: 5004
Number of extensions: 48783
Number of successful extensions: 142
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 142
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 134126124
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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