Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0231.Seq
         (655 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   5.1  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   5.1  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   5.1  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   6.7  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   6.7  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   8.9  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   8.9  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   8.9  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -3

Query: 521 KLNYMAWLSFLSDFHF 474
           KL+Y+   SFL++F+F
Sbjct: 284 KLSYIILTSFLNNFYF 299


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 512 YMAWLSFLSDFHF 474
           Y  WLSFLS F +
Sbjct: 584 YFKWLSFLSWFRY 596


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 512 YMAWLSFLSDFHF 474
           Y  WLSFLS F +
Sbjct: 584 YFKWLSFLSWFRY 596


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +3

Query: 345 LQQLGDGTYGSVVLAQ 392
           LQ++ DG YGSVV+ Q
Sbjct: 249 LQKM-DGLYGSVVIRQ 263


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +3

Query: 345 LQQLGDGTYGSVVLAQ 392
           LQ++ DG YGSVV+ Q
Sbjct: 249 LQKM-DGLYGSVVIRQ 263


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/21 (38%), Positives = 9/21 (42%)
 Frame = -3

Query: 650 WGKXPESGNPPYSRGGKGFPP 588
           +G  P  G PP       FPP
Sbjct: 65  YGGPPSGGQPPQGMPYPRFPP 85


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = -2

Query: 189 LSVSFDK*CYEFMLEKKLFGDSKGLSFITGITFKILL 79
           L+   +K CY+  +    F D  G SF+    +  LL
Sbjct: 256 LTTVVEKECYKMKVTIDAFNDIFGWSFLLFTLYSSLL 292


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = -2

Query: 189 LSVSFDK*CYEFMLEKKLFGDSKGLSFITGITFKILL 79
           L+   +K CY+  +    F D  G SF+    +  LL
Sbjct: 182 LTTVVEKECYKMKVTIDAFNDIFGWSFLLFTLYSSLL 218


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,275
Number of Sequences: 336
Number of extensions: 2683
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)