Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0230.Seq
         (459 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    22   2.8  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   6.4  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   6.4  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   6.4  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   6.4  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   8.5  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   8.5  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   8.5  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   8.5  

>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = -3

Query: 211 WNALHAWRCGPWSPSPPTRG 152
           WNA H        P PP RG
Sbjct: 119 WNAAHPEEDDGGQPRPPGRG 138


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +3

Query: 309 FRKYRQRS*KWARRVPLWD*PISGQR*WTN 398
           FRK+   S  W+  +  W+    G+R + N
Sbjct: 812 FRKFTSASDVWSMGIVCWEVMSYGERPYWN 841


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = -3

Query: 184 GPWSPSPPTRGRSAQTLS 131
           G WSP P    R  +T S
Sbjct: 199 GTWSPDPAINRRLKETYS 216


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = -3

Query: 184 GPWSPSPPTRGRSAQTLS 131
           G WSP P    R  +T S
Sbjct: 199 GTWSPDPAINRRLKETYS 216


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = -3

Query: 184 GPWSPSPPTRGRSAQTLS 131
           G WSP P    R  +T S
Sbjct: 199 GTWSPDPAINRRLKETYS 216


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 231 QRAGEQGQPAGYNRGS 278
           Q+AG+Q Q A   RG+
Sbjct: 259 QQAGQQDQQANIGRGA 274


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -1

Query: 207 MRCTPGAVGLGAPLRRREAGLRR 139
           + CT G   LG P R  + GL R
Sbjct: 532 INCTTGKDELGKPSRISKQGLFR 554


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 10/52 (19%), Positives = 19/52 (36%)
 Frame = -1

Query: 222 LPGPGMRCTPGAVGLGAPLRRREAGLRRHSHRPPEYELVRFQHGFYLLLNFC 67
           + GP  R   G   +    +R +  +         + L   QH   +L++ C
Sbjct: 279 MTGPEQRILSGYHAIAGGQQRPDENVVTDKKSKVNFALPELQHNLNILVDMC 330


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +1

Query: 100 KSHKLVLGRSVRVS 141
           + HKL++G S+R++
Sbjct: 185 QKHKLLIGPSIRIT 198


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,041
Number of Sequences: 438
Number of extensions: 3483
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12189771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)