Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0229.Seq
         (648 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    25   2.7  
AY973196-1|AAY41590.1|   94|Anopheles gambiae defensin 4 protein.      23   6.3  
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            23   6.3  

>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -1

Query: 396 PSRARAGTASSGTPSCGSSRNARWC 322
           PSR RAGT      + G  R+ R C
Sbjct: 400 PSRGRAGTVGGNRGAGGGWRSERTC 424


>AY973196-1|AAY41590.1|   94|Anopheles gambiae defensin 4 protein.
          Length = 94

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -2

Query: 104 RIIQVKSITCTSSTCTA 54
           R   V+++TCT+ TC+A
Sbjct: 56  RSAMVQTLTCTNPTCSA 72


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +1

Query: 64  VELVHVIDLTCIILHI*LCVL 126
           V+  H+I LTC+I+ +  C++
Sbjct: 838 VDRTHMIVLTCVIVSVVACLV 858


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 537,925
Number of Sequences: 2352
Number of extensions: 8587
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)