Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0229.Seq
         (648 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78544-4|CAB01762.3|  374|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical pr...    28   6.6  
Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical pr...    28   6.6  
AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-l...    28   6.6  
AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-l...    28   6.6  

>Z78544-4|CAB01762.3|  374|Caenorhabditis elegans Hypothetical
           protein K04G11.5 protein.
          Length = 374

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +3

Query: 78  RY*FDLYYPSYLTLCVNC 131
           RY  DL  P+YLTLCV C
Sbjct: 141 RYMTDLCPPAYLTLCVQC 158


>Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical
           protein B0457.1b protein.
          Length = 1012

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 21/64 (32%), Positives = 28/64 (43%)
 Frame = -1

Query: 384 RAGTASSGTPSCGSSRNARWCCLSPSQILFNTVSS*NTLSNMITLNKSG*SHFMNSEL*L 205
           ++GT SS     GSS    W C    Q L    +S    SN I+   S  S  ++SE   
Sbjct: 196 KSGTTSSAPCPEGSSGKQLWACTEEGQWLTEFPNSAGCESNWISSRNSVLSGVISSEDVS 255

Query: 204 TLPD 193
            LP+
Sbjct: 256 GLPE 259


>Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical
           protein B0457.1a protein.
          Length = 1014

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 21/64 (32%), Positives = 28/64 (43%)
 Frame = -1

Query: 384 RAGTASSGTPSCGSSRNARWCCLSPSQILFNTVSS*NTLSNMITLNKSG*SHFMNSEL*L 205
           ++GT SS     GSS    W C    Q L    +S    SN I+   S  S  ++SE   
Sbjct: 198 KSGTTSSAPCPEGSSGKQLWACTEEGQWLTEFPNSAGCESNWISSRNSVLSGVISSEDVS 257

Query: 204 TLPD 193
            LP+
Sbjct: 258 GLPE 261


>AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-like
           protein LAT-1B protein.
          Length = 1012

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 21/64 (32%), Positives = 28/64 (43%)
 Frame = -1

Query: 384 RAGTASSGTPSCGSSRNARWCCLSPSQILFNTVSS*NTLSNMITLNKSG*SHFMNSEL*L 205
           ++GT SS     GSS    W C    Q L    +S    SN I+   S  S  ++SE   
Sbjct: 196 KSGTTSSAPCPEGSSGKQLWACTEEGQWLTEFPNSAGCESNWISSRNSVLSGVISSEDVS 255

Query: 204 TLPD 193
            LP+
Sbjct: 256 GLPE 259


>AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-like
           protein LAT-1A protein.
          Length = 1014

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 21/64 (32%), Positives = 28/64 (43%)
 Frame = -1

Query: 384 RAGTASSGTPSCGSSRNARWCCLSPSQILFNTVSS*NTLSNMITLNKSG*SHFMNSEL*L 205
           ++GT SS     GSS    W C    Q L    +S    SN I+   S  S  ++SE   
Sbjct: 198 KSGTTSSAPCPEGSSGKQLWACTEEGQWLTEFPNSAGCESNWISSRNSVLSGVISSEDVS 257

Query: 204 TLPD 193
            LP+
Sbjct: 258 GLPE 261


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,804,780
Number of Sequences: 27780
Number of extensions: 195666
Number of successful extensions: 524
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 524
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)