Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0228.Seq
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       24   1.4  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    24   1.4  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    24   1.4  
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    22   4.2  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   4.2  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   5.5  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    22   5.5  

>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 17/68 (25%), Positives = 33/68 (48%)
 Frame = +2

Query: 236 ISHNLCYSKDDTKDYDVAAKSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKK 415
           I+H LC ++   K +    + +LKK     +R   +  ++A+ E E  E+  Q   E ++
Sbjct: 39  IAHALCLTERQIKIWFQNRRMKLKK----ELRAVKEINEQARREREEQERHKQQQQEKQQ 94

Query: 416 ILLQEDPS 439
            + Q+  S
Sbjct: 95  KIEQQTHS 102


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 17/68 (25%), Positives = 33/68 (48%)
 Frame = +2

Query: 236 ISHNLCYSKDDTKDYDVAAKSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKK 415
           I+H LC ++   K +    + +LKK     +R   +  ++A+ E E  E+  Q   E ++
Sbjct: 190 IAHALCLTERQIKIWFQNRRMKLKK----ELRAVKEINEQARREREEQERHKQQQQEKQQ 245

Query: 416 ILLQEDPS 439
            + Q+  S
Sbjct: 246 KIEQQTHS 253


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 17/68 (25%), Positives = 33/68 (48%)
 Frame = +2

Query: 236 ISHNLCYSKDDTKDYDVAAKSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKK 415
           I+H LC ++   K +    + +LKK     +R   +  ++A+ E E  E+  Q   E ++
Sbjct: 249 IAHALCLTERQIKIWFQNRRMKLKK----ELRAVKEINEQARREREEQERHKQQQQEKQQ 304

Query: 416 ILLQEDPS 439
            + Q+  S
Sbjct: 305 KIEQQTHS 312


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = -1

Query: 185 LFRTITCIVIAILIRGIYLGQAKVSNVRHVERLLTNY 75
           +F  +TC  +  L   +      + ++   ERLL NY
Sbjct: 5   VFLVLTCAHVVFLEEYVIPDNIDIDDILSNERLLKNY 41


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -1

Query: 248 NCGKWLFASMMHCFQYC 198
           NC   L+A M++C++ C
Sbjct: 718 NCSPDLYAVMLNCWKEC 734


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = +3

Query: 444 QRPLL*KYVKQLNTVVRGYASEMGTSSP 527
           +RP + KY+ + N VV+ + +     +P
Sbjct: 461 KRPYIYKYLDKKNVVVQSWGASQWPDTP 488


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 212 NASCWQRAISHNLCYSK 262
           N   WQ +I HNL  +K
Sbjct: 123 NKQGWQNSIRHNLSLNK 139


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,918
Number of Sequences: 336
Number of extensions: 3304
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)