Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0228.Seq
         (698 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71262-12|CAA95808.1|  545|Caenorhabditis elegans Hypothetical p...    72   5e-13
U88171-1|AAB42251.2|  630|Caenorhabditis elegans Hypothetical pr...    32   0.45 
U40797-14|AAB37544.2|  200|Caenorhabditis elegans Hypothetical p...    31   1.0  
AC024841-3|AAK68542.1|  185|Caenorhabditis elegans Hypothetical ...    30   1.4  
AF078790-14|AAC26930.1|  335|Caenorhabditis elegans Hypothetical...    30   1.8  
AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical...    29   4.2  
Z50016-13|CAO82071.1|  211|Caenorhabditis elegans Hypothetical p...    28   5.6  
Z50016-12|CAA90317.3|  192|Caenorhabditis elegans Hypothetical p...    28   5.6  
U37430-4|AAB52675.1| 1616|Caenorhabditis elegans Vitellogenin st...    28   5.6  
Z81519-6|CAB04220.2| 1631|Caenorhabditis elegans Hypothetical pr...    28   7.4  
U23525-9|ABC71820.1|  766|Caenorhabditis elegans Hypothetical pr...    28   7.4  
AL034543-6|CAJ43443.1| 1631|Caenorhabditis elegans Hypothetical ...    28   7.4  
AF063007-1|AAC16430.2|  730|Caenorhabditis elegans Hypothetical ...    28   7.4  
AF068713-11|AAC17792.1|  315|Caenorhabditis elegans Serpentine r...    27   9.8  

>Z71262-12|CAA95808.1|  545|Caenorhabditis elegans Hypothetical
           protein F22D6.3a protein.
          Length = 545

 Score = 71.7 bits (168), Expect = 5e-13
 Identities = 44/121 (36%), Positives = 68/121 (56%), Gaps = 1/121 (0%)
 Frame = +2

Query: 263 DDTKDYDVAAKSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQN-LDEAKKILLQEDPS 439
           ++ + ++ AAK+ +KK  K +  E  K ++KA   E+  E+     L+EAKKI    D S
Sbjct: 46  EEGESWEPAAKAAIKKAVKKYEAE-VKKLEKAGCREKEAEEAQHAALEEAKKITFSLDKS 104

Query: 440 LPKATVVKICETTEHRGQRICIRDGYIVSGAKVNLWAFLTLA*WHWVLQCVLHGLLCQTY 619
           LP+A V+KI E+ +HR QR+ I+        +     FL L   +  LQCVL+  LCQ+Y
Sbjct: 105 LPEAKVIKIGESVQHRDQRVSIKAWVHRLRRQGKSLMFLVLRDGYGFLQCVLNDKLCQSY 164

Query: 620 N 622
           +
Sbjct: 165 D 165


>U88171-1|AAB42251.2|  630|Caenorhabditis elegans Hypothetical
           protein F25F8.1 protein.
          Length = 630

 Score = 31.9 bits (69), Expect = 0.45
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +1

Query: 94  STCRTLETLACPRYIPRIRMAMTIQVMVRKRXH 192
           S CR +E +ACPR  P+I M+ T  + V  R H
Sbjct: 404 SNCRKVEVIACPR-DPKIEMSRTRWITVGPRGH 435


>U40797-14|AAB37544.2|  200|Caenorhabditis elegans Hypothetical
           protein C28C12.1 protein.
          Length = 200

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = +2

Query: 359 KAEEENTEKRSQNLDEAKKILLQEDPSL 442
           K +EE TEK+   + E++K +L+ED +L
Sbjct: 160 KTDEEGTEKKEPTMTESRKEMLREDDTL 187


>AC024841-3|AAK68542.1|  185|Caenorhabditis elegans Hypothetical
           protein Y59H11AM.4 protein.
          Length = 185

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 20/61 (32%), Positives = 31/61 (50%)
 Frame = +2

Query: 260 KDDTKDYDVAAKSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQEDPS 439
           K++ KD +   ++  KKI +    E     DK   EE   EK+   L ++KK  L+ED +
Sbjct: 123 KNEEKDAEAPVENDDKKISE----EGINKTDKT--EEPELEKKKSELSDSKKERLREDDT 176

Query: 440 L 442
           L
Sbjct: 177 L 177


>AF078790-14|AAC26930.1|  335|Caenorhabditis elegans Hypothetical
           protein F36H12.3 protein.
          Length = 335

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 20/63 (31%), Positives = 34/63 (53%)
 Frame = +2

Query: 260 KDDTKDYDVAAKSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQEDPS 439
           K++ KD D   K + KK +K   ++  K  +K K EE+  EK+ +  ++ KK+  +  P 
Sbjct: 166 KEEKKD-DKEEKKEEKKEEKKEEKKEEKKEEK-KEEEKKEEKKEEKKEDEKKV--EPKPG 221

Query: 440 LPK 448
            PK
Sbjct: 222 EPK 224



 Score = 29.1 bits (62), Expect = 3.2
 Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = +2

Query: 260 KDDTKDYDVAAKSQLKKIQKIWVRENYKAMDKA-KAEEENTEKRSQNLDEAKKILLQED 433
           K D KD     K + KK  K   +E  K   K  K EE+  EK+ +   E KK   +ED
Sbjct: 154 KSDNKDDKDDEKKEEKKDDKEEKKEEKKEEKKEEKKEEKKEEKKEEEKKEEKKEEKKED 212


>AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical
           protein Y51A2D.15 protein.
          Length = 1222

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = +2

Query: 329 RENYKAMDKAKAEEENTEKRSQNLDEAKKI 418
           +EN K  D+ +  ++ ++KRSQNLDE + +
Sbjct: 852 QENTKLRDELQEMQKMSKKRSQNLDELENM 881


>Z50016-13|CAO82071.1|  211|Caenorhabditis elegans Hypothetical
           protein T21C12.4b protein.
          Length = 211

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 17/70 (24%), Positives = 33/70 (47%)
 Frame = +2

Query: 293 KSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQEDPSLPKATVVKICE 472
           KS  K I K   R     + ++   ++  EK+  ++ E K +   +D  +P     K  E
Sbjct: 141 KSNKKSISKKSDRSKVSKVKRSPKTDKELEKKPSSIYERKDVDGHDDLKVPNMRSRKHSE 200

Query: 473 TTEHRGQRIC 502
            +++RG ++C
Sbjct: 201 NSKNRG-KVC 209


>Z50016-12|CAA90317.3|  192|Caenorhabditis elegans Hypothetical
           protein T21C12.4a protein.
          Length = 192

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 17/70 (24%), Positives = 33/70 (47%)
 Frame = +2

Query: 293 KSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQEDPSLPKATVVKICE 472
           KS  K I K   R     + ++   ++  EK+  ++ E K +   +D  +P     K  E
Sbjct: 122 KSNKKSISKKSDRSKVSKVKRSPKTDKELEKKPSSIYERKDVDGHDDLKVPNMRSRKHSE 181

Query: 473 TTEHRGQRIC 502
            +++RG ++C
Sbjct: 182 NSKNRG-KVC 190


>U37430-4|AAB52675.1| 1616|Caenorhabditis elegans Vitellogenin
            structural genes (yolk protein genes) protein 1 protein.
          Length = 1616

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 22/75 (29%), Positives = 34/75 (45%)
 Frame = +2

Query: 293  KSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQEDPSLPKATVVKICE 472
            K+  K  ++ +  E Y   +    E+ENT K+ +N    KK  L E   + K    +IC 
Sbjct: 1489 KNYRKYDERKYESEEYSFEETYDYEQENTNKKQKNQRSQKKSDLVEKTQI-KEFSHRICF 1547

Query: 473  TTEHRGQRICIRDGY 517
            + E   +  C R GY
Sbjct: 1548 SVEPVAE--CRRRGY 1560


>Z81519-6|CAB04220.2| 1631|Caenorhabditis elegans Hypothetical
           protein F29C12.3 protein.
          Length = 1631

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
 Frame = +2

Query: 293 KSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNL---DEAKKILLQEDPSLPKATVVK 463
           ++  ++IQ+I  RE+ +   +AK   E +EKR +     ++ +K++   D S  KAT  +
Sbjct: 12  ENNTQRIQEI--RESIRVKTRAKKVSETSEKRRERFRAREDVQKLIRGAD-SYTKATYEE 68

Query: 464 ICE 472
            CE
Sbjct: 69  KCE 71


>U23525-9|ABC71820.1|  766|Caenorhabditis elegans Hypothetical
           protein K11G12.6b protein.
          Length = 766

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +2

Query: 578 VLQCVLHGLLCQTYNGSSPIYXVICGLVWEIRGLCP 685
           + +C+L+G L   +   S IY  I GL  E RGL P
Sbjct: 9   IKKCILYGQLIVLFTAFSSIYPQIHGLFGE-RGLVP 43


>AL034543-6|CAJ43443.1| 1631|Caenorhabditis elegans Hypothetical
           protein F29C12.3 protein.
          Length = 1631

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
 Frame = +2

Query: 293 KSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNL---DEAKKILLQEDPSLPKATVVK 463
           ++  ++IQ+I  RE+ +   +AK   E +EKR +     ++ +K++   D S  KAT  +
Sbjct: 12  ENNTQRIQEI--RESIRVKTRAKKVSETSEKRRERFRAREDVQKLIRGAD-SYTKATYEE 68

Query: 464 ICE 472
            CE
Sbjct: 69  KCE 71


>AF063007-1|AAC16430.2|  730|Caenorhabditis elegans Hypothetical
           protein R119.1 protein.
          Length = 730

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +2

Query: 377 TEKRSQNLDEAKKILLQEDPSLPKATVVKICETTE 481
           T    +NLD       QED  LP+    K+C+ TE
Sbjct: 648 TSVGEENLDPMDYCTCQEDEILPEDPCFKVCDITE 682


>AF068713-11|AAC17792.1|  315|Caenorhabditis elegans Serpentine
           receptor, class i protein21 protein.
          Length = 315

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +2

Query: 533 KVNLWAFLTLA*WHWVLQCVLHGLLCQTYNG 625
           +V  WA L LA  H  + C++  L C  Y G
Sbjct: 271 QVTNWAMLALASCHGTVNCLVMILTCPPYRG 301


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,229,246
Number of Sequences: 27780
Number of extensions: 301186
Number of successful extensions: 903
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 899
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)