Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0226.Seq
(568 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.) 140 1e-33
SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.) 133 1e-31
SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0) 133 1e-31
SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0) 133 1e-31
SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29) 120 1e-27
SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037) 69 3e-12
SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10) 50 2e-06
SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12) 35 0.040
SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.053
SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05) 34 0.070
SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.12
SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18) 32 0.38
SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11) 31 0.66
SB_22742| Best HMM Match : ubiquitin (HMM E-Value=0.01) 30 1.1
SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055) 30 1.5
SB_5154| Best HMM Match : zf-C2H2 (HMM E-Value=1.8) 29 2.6
SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_31564| Best HMM Match : ubiquitin (HMM E-Value=0.0026) 28 4.6
SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12) 27 8.1
SB_35539| Best HMM Match : RVT_1 (HMM E-Value=1.7e-07) 27 8.1
SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012) 27 8.1
>SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 140 bits (338), Expect = 1e-33
Identities = 78/144 (54%), Positives = 80/144 (55%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDY
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 192 IQXESTLHLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXN*PSSGFXXXXXXXXXXXXXAS 371
IQ ESTLHLV +
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKNYTTPKKIKHKKKKVKLAVLKYYKVDENGKITRLRRE 120
Query: 372 XRXEQCXAGVFXAVMXDRNYCXKC 443
E C AGVF A DR YC KC
Sbjct: 121 CPSESCGAGVFMASHFDRQYCGKC 144
Score = 45.2 bits (102), Expect = 4e-05
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = +2
Query: 251 QEKNYSTPXXXXXXXXXXXLAVLRFYKVDENGKXHRLXRE 370
++KNY+TP LAVL++YKVDENGK RL RE
Sbjct: 81 KKKNYTTPKKIKHKKKKVKLAVLKYYKVDENGKITRLRRE 120
>SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 133 bits (321), Expect = 1e-31
Identities = 65/70 (92%), Positives = 66/70 (94%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDY
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 133 bits (321), Expect = 1e-31
Identities = 65/70 (92%), Positives = 66/70 (94%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDY
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 133 bits (321), Expect = 1e-31
Identities = 65/70 (92%), Positives = 66/70 (94%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDY
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 133 bits (321), Expect = 1e-31
Identities = 65/70 (92%), Positives = 66/70 (94%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDY
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 289 IQKESTLHLV 298
Score = 133 bits (321), Expect = 1e-31
Identities = 65/70 (92%), Positives = 66/70 (94%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDY
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 365 IQKESTLHLV 374
Score = 133 bits (321), Expect = 1e-31
Identities = 65/70 (92%), Positives = 66/70 (94%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDY
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 441 IQKESTLHLV 450
Score = 133 bits (321), Expect = 1e-31
Identities = 65/70 (92%), Positives = 66/70 (94%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDY
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 517 IQKESTLHLV 526
>SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 381
Score = 133 bits (321), Expect = 1e-31
Identities = 65/70 (92%), Positives = 66/70 (94%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDY
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 133 bits (321), Expect = 1e-31
Identities = 65/70 (92%), Positives = 66/70 (94%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDY
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 133 bits (321), Expect = 1e-31
Identities = 65/70 (92%), Positives = 66/70 (94%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDY
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 133 bits (321), Expect = 1e-31
Identities = 65/70 (92%), Positives = 66/70 (94%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDY
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 289 IQKESTLHLV 298
Score = 133 bits (321), Expect = 1e-31
Identities = 65/70 (92%), Positives = 66/70 (94%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDY
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 365 IQKESTLHLV 374
>SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 147
Score = 133 bits (321), Expect = 1e-31
Identities = 65/70 (92%), Positives = 66/70 (94%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDY
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 75.8 bits (178), Expect = 2e-14
Identities = 38/69 (55%), Positives = 50/69 (72%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VK KT TL+VE SDT+E+VK KIQ++EGIPP QRL++ ++L D R+L+DY
Sbjct: 77 MQISVKA-HWKTFTLDVEASDTVESVKEKIQNREGIPPKVQRLLYEEEELVDNRSLADYN 135
Query: 192 IQXESTLHL 218
I+ S LHL
Sbjct: 136 IKQGSILHL 144
>SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29)
Length = 142
Score = 120 bits (288), Expect = 1e-27
Identities = 58/62 (93%), Positives = 59/62 (95%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDY
Sbjct: 79 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 138
Query: 192 IQ 197
IQ
Sbjct: 139 IQ 140
>SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037)
Length = 150
Score = 68.9 bits (161), Expect = 3e-12
Identities = 32/35 (91%), Positives = 33/35 (94%)
Frame = +3
Query: 117 IPPNQQRLIFAGKQLEDGRTLSDYXIQXESTLHLV 221
IPP+QQRLIFAGKQLEDGRTLSDY IQ ESTLHLV
Sbjct: 2 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 36
>SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10)
Length = 333
Score = 49.6 bits (113), Expect = 2e-06
Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +3
Query: 24 VKTLTGKTITLEVE-PSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYXIQX 200
V TLTG+ I + + P TI VK I+ K G P +QQRL+F G+ L D T I
Sbjct: 75 VLTLTGERILIPFKSPKHTIIEVKYLIEAKGGYPKDQQRLVFNGQVLSDEDTFEKVGIFA 134
Query: 201 ESTLHLV 221
+TLHL+
Sbjct: 135 GATLHLI 141
>SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12)
Length = 348
Score = 35.1 bits (77), Expect = 0.040
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED-GRTLSDY 188
M+ V G TL+V +EN +A ++ + G+P ++ L G QL D +TL+ Y
Sbjct: 1 MKVTVTGEDGSIFTLDVSVDLEVENFRALLEFESGVPASEISLYHDGVQLSDLKKTLTAY 60
Query: 189 XIQXESTLHLV 221
++ + +V
Sbjct: 61 SVKENDVILMV 71
>SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 35
Score = 34.7 bits (76), Expect = 0.053
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKE 113
M ++TLTG L V P +TI +VKAKIQ E
Sbjct: 1 MDLYIQTLTGTAFELRVSPFETIMSVKAKIQRLE 34
>SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05)
Length = 198
Score = 34.3 bits (75), Expect = 0.070
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +3
Query: 108 KEGIPPNQQRLIFAGKQLEDGRTLSDY 188
+EGIP +QRLIF GK L+D + L ++
Sbjct: 19 EEGIPAERQRLIFKGKVLQDEKKLKEF 45
>SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1076
Score = 33.5 bits (73), Expect = 0.12
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +3
Query: 36 TGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL 179
+G L++ + TIE ++ ++ DK G PP QR I K + +L
Sbjct: 44 SGGAFNLQIPLNTTIEKLQNEVADKYGFPPKVQRWIIGKKMAKPNESL 91
>SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18)
Length = 796
Score = 31.9 bits (69), Expect = 0.38
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 114 GIPPNQQRLIFAGKQLEDGRTLSDY 188
GIP +QRLIF GK L+D + L ++
Sbjct: 1 GIPAERQRLIFKGKVLQDEKKLKEF 25
>SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11)
Length = 744
Score = 31.1 bits (67), Expect = 0.66
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +3
Query: 87 VKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLS 182
+K++I+ K GIP + QRL F K+L D TL+
Sbjct: 32 LKSRIELKTGIPGDIQRLHFMNKELYDDATLA 63
>SB_22742| Best HMM Match : ubiquitin (HMM E-Value=0.01)
Length = 792
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +3
Query: 24 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSD 185
++T G T+ +E+ ++E++KA+ + + GIP RL LED + +
Sbjct: 187 LQTRGGSTLEIEITERTSVEDLKAEAELRVGIPVELIRLQVNKVNLEDSEKICE 240
>SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055)
Length = 411
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = +3
Query: 39 GKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYXIQXESTLHL 218
G+ ITL P + ++ + G P ++ K LED T++D Q +TL +
Sbjct: 175 GQVITLHCNPRQSFSELRNHFSSEFGQPAEAILMLHEDKILEDQGTIADLSHQPGATLQI 234
>SB_5154| Best HMM Match : zf-C2H2 (HMM E-Value=1.8)
Length = 180
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 65 AVRYHRECES*NSRQRGNPSQSTEVDLCWKAAGRWT 172
+ Y +E E + RQR +S E D+C K R+T
Sbjct: 39 STEYTQESEGLDERQRARGKKSFECDICGKCFSRFT 74
>SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1353
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 75 TIENVKAKIQDKEGIPPNQQRLIFA-GKQLEDGRTLSDYXIQXESTLHL 218
T+ ++K + +K G+ + RL+ GK++ D L DY I T+ L
Sbjct: 86 TVGDLKTMVTNKTGLHVSVFRLVIPEGKEMFDCNLLKDYNISTGDTIRL 134
>SB_31564| Best HMM Match : ubiquitin (HMM E-Value=0.0026)
Length = 309
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/69 (23%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +3
Query: 24 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGR---TLSDYXI 194
V + G+T + P +I +K KI + +QRL++ +L++ + LS++ +
Sbjct: 60 VAMMGGETTVIPYNPVMSIAELKLKISQNIRVDRLKQRLMYNDTELKENKGSGKLSEFGV 119
Query: 195 QXESTLHLV 221
+T+ L+
Sbjct: 120 PPYATISLI 128
>SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12)
Length = 481
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +3
Query: 33 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLE 164
L G +IT+ +E D +EN++ +K+ +PP ++L+F + L+
Sbjct: 102 LGGNSITV-IEGLDKLENLRELHMEKQHLPPG-EKLLFDPRTLQ 143
>SB_35539| Best HMM Match : RVT_1 (HMM E-Value=1.7e-07)
Length = 1105
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 107 QRGNPSQSTEVDLCWKAAGRWTYPLGLXXPXGIHPPPGVEAS 232
QRG S+ T + W+ +G + L IHPP V S
Sbjct: 299 QRGVSSRKTMISKAWQVSGVYHITLDANVTPVIHPPRRVAIS 340
>SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012)
Length = 1148
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/65 (23%), Positives = 35/65 (53%)
Frame = +3
Query: 3 RVKMQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLS 182
R +Q ++T GKTI L E + ++ + ++K+G+ ++L + ++L+ T +
Sbjct: 711 RDDLQDSLETAEGKTIKLTQELDEKMKLIAGIKEEKQGLAAEVKQLQKSSEELQQQLTDT 770
Query: 183 DYXIQ 197
+ +Q
Sbjct: 771 EEKLQ 775
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,470,421
Number of Sequences: 59808
Number of extensions: 220761
Number of successful extensions: 419
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 419
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1337207630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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