Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0223.Seq
         (801 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    25   0.53 
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      25   0.53 
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      25   0.93 
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   3.7  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   5.0  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   8.7  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   8.7  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   8.7  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   8.7  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   8.7  

>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 25.4 bits (53), Expect = 0.53
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = -3

Query: 532 GLLSHERIIFECI*KNKQIGVPRTFPRKVPPDAPCSGALSAAGV 401
           G  + E +I E + KN+  G+P  F   V P     G++++  V
Sbjct: 306 GYTTREGMIVEMMRKNETPGMPNDFEEFVHPTVAKRGSITSKNV 349


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 25.4 bits (53), Expect = 0.53
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = -3

Query: 532 GLLSHERIIFECI*KNKQIGVPRTFPRKVPPDAPCSGALSAAGV 401
           G  + E +I E + KN+  G+P  F   V P     G++++  V
Sbjct: 306 GYTTREGMIVEMMRKNETPGMPNDFEEFVHPTVAKRGSITSKNV 349


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 24.6 bits (51), Expect = 0.93
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = -3

Query: 532 GLLSHERIIFECI*KNKQIGVPRTFPRKVPPDAPCSGALSAAGV 401
           G  + E +I E + KN+  G+P  F   V P     G++++  V
Sbjct: 304 GYTTREGMIVEMMRKNETPGMPNDFEGFVHPTVAKRGSITSKNV 347


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +1

Query: 586 PCRPYSLFCGILPSCFCS 639
           PC P    C +LP CFCS
Sbjct: 162 PCDP--AVC-VLPDCFCS 176


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 592 RPYSLFCGILPSCFCSPRN 648
           RP+SL+CG  P    +P N
Sbjct: 355 RPWSLYCGEPPCGQLNPDN 373


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = -3

Query: 304 SPSSSKSGAP 275
           SPSS+KSG+P
Sbjct: 74  SPSSTKSGSP 83


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = +1

Query: 151 TWTPTSKGEKPSIRAMAHYVNHHPN 225
           TW     G + ++  M  +VN  P+
Sbjct: 271 TWNVVFNGSRKNLDVMKSFVNFRPS 295


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -3

Query: 469 PRTFPRKVPPDAPCSGALSAAGVVVTRSVSRYTCQRPSA 353
           PRT  R+       SGA SA      RS S ++  +PS+
Sbjct: 123 PRTASRETKSSESDSGASSADPDDELRSSSAFSYIKPSS 161


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = -3

Query: 634 KNRKAKCRKK 605
           KNR+AKCR++
Sbjct: 176 KNRRAKCRQQ 185


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = -3

Query: 634 KNRKAKCRKK 605
           KNR+AKCR++
Sbjct: 118 KNRRAKCRQQ 127


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,981
Number of Sequences: 336
Number of extensions: 3877
Number of successful extensions: 19
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21791490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)