Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0222.Seq
(819 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15542| Best HMM Match : Lig_chan (HMM E-Value=0) 33 0.21
SB_49607| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.49
SB_49376| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_48060| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_54326| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_14715| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.0024) 30 2.6
SB_38693| Best HMM Match : DIE2_ALG10 (HMM E-Value=0.18) 29 4.5
SB_45874| Best HMM Match : TIR (HMM E-Value=0.43) 29 6.0
SB_22055| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
>SB_15542| Best HMM Match : Lig_chan (HMM E-Value=0)
Length = 729
Score = 33.5 bits (73), Expect = 0.21
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +3
Query: 3 TANLARFVARINQKNFRHVTDEYNKQNAKKQSTGSQSDREAANFPNQTRNKILAALF 173
TANLA F + KNF D+ KQ KK S G A+F ++ N + +F
Sbjct: 376 TANLAAFFTKKTSKNFIETLDDLTKQ--KKISYGCLKGGSMASFFEKSNNPLYKTMF 430
>SB_49607| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4538
Score = 32.3 bits (70), Expect = 0.49
Identities = 17/67 (25%), Positives = 37/67 (55%)
Frame = -2
Query: 380 SYINLGTHNTFGQQCMSSAVSLVKL*TSVTISCPLLHSQTFHVISRVLKVFQLLKHSISH 201
+Y N+G +N +C+++ + + ++ + P++ + TFH + + K++QL K +
Sbjct: 1901 TYTNVGVYNVT-VKCINNFGTNISAAIAI-VEIPIVANITFHNLGKFRKIYQLDKLRLQT 1958
Query: 200 CIPRHSN 180
I HSN
Sbjct: 1959 IISSHSN 1965
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/67 (23%), Positives = 35/67 (52%)
Frame = -2
Query: 380 SYINLGTHNTFGQQCMSSAVSLVKL*TSVTISCPLLHSQTFHVISRVLKVFQLLKHSISH 201
+Y N+G +N C+++ + + ++ + P++ + TFH + + K++QL K +
Sbjct: 2075 TYTNVGVYNVT-VYCINNFGTKISAAIAI-VEIPIVANITFHNLGKFRKIYQLDKLRLQA 2132
Query: 200 CIPRHSN 180
I SN
Sbjct: 2133 IISSRSN 2139
>SB_49376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 270
Score = 30.7 bits (66), Expect = 1.5
Identities = 24/71 (33%), Positives = 31/71 (43%)
Frame = +3
Query: 9 NLARFVARINQKNFRHVTDEYNKQNAKKQSTGSQSDREAANFPNQTRNKILAALFAAIAM 188
NL F RI Q+ F D + Q K T D + P Q R L+ A +AM
Sbjct: 174 NLYNFCGRILQRYFP--PDPEDPQQYKPSPTHPSLDED----PYQKRKMWLSVGIAVVAM 227
Query: 189 TGYAVANGMFQ 221
YAV +G+ Q
Sbjct: 228 VTYAVLSGLVQ 238
>SB_48060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 270
Score = 30.7 bits (66), Expect = 1.5
Identities = 24/71 (33%), Positives = 31/71 (43%)
Frame = +3
Query: 9 NLARFVARINQKNFRHVTDEYNKQNAKKQSTGSQSDREAANFPNQTRNKILAALFAAIAM 188
NL F RI Q+ F D + Q K T D + P Q R L+ A +AM
Sbjct: 174 NLYNFCGRILQRYFP--PDPEDPQQYKPSPTHPSLDED----PYQKRKMWLSVGIAVVAM 227
Query: 189 TGYAVANGMFQ 221
YAV +G+ Q
Sbjct: 228 VTYAVLSGLVQ 238
>SB_54326| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 183
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/41 (26%), Positives = 27/41 (65%)
Frame = +1
Query: 37 IRKILDTSQMNIINRMQRNSPQARSLIEKPQTFPTRLEIKS 159
+RK ++ +N++N+++ + + R++++KP T T E +S
Sbjct: 48 LRKQSLSTAVNVLNKLENENSRERNILQKPVTIRTTTESQS 88
>SB_14715| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.0024)
Length = 2040
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/41 (26%), Positives = 27/41 (65%)
Frame = +1
Query: 37 IRKILDTSQMNIINRMQRNSPQARSLIEKPQTFPTRLEIKS 159
+RK ++ +N++N+++ + + R++++KP T T E +S
Sbjct: 816 LRKQSLSTAVNVLNKLENENSRERNILQKPVTIRTTTESQS 856
>SB_38693| Best HMM Match : DIE2_ALG10 (HMM E-Value=0.18)
Length = 583
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Frame = +3
Query: 117 REAANFPNQTRNKILAALFAAIAMTG---YAVAN 209
+ A NFP+ RN+ ++ +F+ IA YAVAN
Sbjct: 17 KTAVNFPDLVRNRTVSEIFSVIAQNDTLLYAVAN 50
>SB_45874| Best HMM Match : TIR (HMM E-Value=0.43)
Length = 876
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/40 (32%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +1
Query: 37 IRKILDTSQMNIINRMQRNSPQ-ARSLIEKPQTFPTRLEI 153
+RK LD S + ++ R+++ SP+ + ++K FPT +E+
Sbjct: 825 VRKKLDGSMLILLYRLKQESPEFYYASVKKDMDFPTVIEV 864
>SB_22055| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 377
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -1
Query: 639 YATESYGDD*NH*VTKCDYTFLNAFLFRLLNDLV 538
Y SYGDD N + + +TF +A+L L+ +L+
Sbjct: 40 YHITSYGDDRNRAMRQYSFTFSSAYLAFLVGELL 73
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,425,861
Number of Sequences: 59808
Number of extensions: 400512
Number of successful extensions: 767
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2287608719
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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