Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0219.Seq
         (797 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2265|AAF53230.1|  255|Drosophila melanogaster CG16800-P...    33   0.45 
AY122208-1|AAM52720.1|  437|Drosophila melanogaster LP05177p pro...    30   3.2  
AE014297-4324|AAN14153.1|  796|Drosophila melanogaster CG11880-P...    30   3.2  
AE014297-4323|AAN14152.1|  796|Drosophila melanogaster CG11880-P...    30   3.2  
AE014297-4322|AAF56859.1|  796|Drosophila melanogaster CG11880-P...    30   3.2  
AY094843-1|AAM11196.1|  547|Drosophila melanogaster RE01910p pro...    29   5.6  
AY061833-1|AAL27644.1|  998|Drosophila melanogaster SD07678p pro...    29   5.6  
AL133505-3|CAB65842.1|  649|Drosophila melanogaster EG:BACH59J11...    29   5.6  
AE014298-401|AAF45782.2|  547|Drosophila melanogaster CG32796-PA...    29   5.6  
AE014298-400|AAF45784.2|  998|Drosophila melanogaster CG32796-PB...    29   5.6  
BT030255-1|ABN49394.1|  424|Drosophila melanogaster IP18339p pro...    29   7.4  
BT030205-1|ABN49344.1|  424|Drosophila melanogaster IP18039p pro...    29   7.4  
AY102651-1|AAM27480.1|  602|Drosophila melanogaster GH01517p pro...    29   7.4  
AE014298-2549|AAF48717.1|  347|Drosophila melanogaster CG12996-P...    29   7.4  
AE014297-1927|AAF55121.3|  602|Drosophila melanogaster CG33485-P...    29   7.4  
X07278-1|CAA30259.1|  622|Drosophila melanogaster protein ( Dros...    29   9.7  
AF145687-1|AAD38662.1| 1146|Drosophila melanogaster BcDNA.LD2470...    29   9.7  
AE014296-2767|AAF49440.2| 1146|Drosophila melanogaster CG17286-P...    29   9.7  

>AE014134-2265|AAF53230.1|  255|Drosophila melanogaster CG16800-PA
           protein.
          Length = 255

 Score = 33.1 bits (72), Expect = 0.45
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = -2

Query: 82  RGHFSDAGADGEHARREHHEKFHYHS 5
           +GH    G  GEH   E HEK H HS
Sbjct: 78  KGHHDKEGKKGEHGEEEGHEKKHKHS 103


>AY122208-1|AAM52720.1|  437|Drosophila melanogaster LP05177p
           protein.
          Length = 437

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 20/112 (17%), Positives = 52/112 (46%), Gaps = 2/112 (1%)
 Frame = -3

Query: 510 SEVHSVVLPQGN--ELPTDEVAVLFLTIAVCKSLVRGIKSGAXXXXXXXXXXXXXXXXSG 337
           ++  ++V+PQ N  + P DE  ++     + +++++                      +G
Sbjct: 226 TDAQALVVPQANGKQTPVDEEPIIQCKRRLNEAVIKEKMMQTDTRLAKLVGNMVAHFYNG 285

Query: 336 HDESKVIGEVLSDNVLSVADPQLVAVLLVFRLLSMIRLLTTFWMMEPLPWFS 181
            ++++++GE + +++++     LVA      + S+I +    W+  P+ WFS
Sbjct: 286 TNDAQLLGEKIVEDLVNSWSIVLVACFCTL-VASLIYIALMRWLSAPILWFS 336


>AE014297-4324|AAN14153.1|  796|Drosophila melanogaster CG11880-PC,
           isoform C protein.
          Length = 796

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 20/112 (17%), Positives = 52/112 (46%), Gaps = 2/112 (1%)
 Frame = -3

Query: 510 SEVHSVVLPQGN--ELPTDEVAVLFLTIAVCKSLVRGIKSGAXXXXXXXXXXXXXXXXSG 337
           ++  ++V+PQ N  + P DE  ++     + +++++                      +G
Sbjct: 226 TDAQALVVPQANGKQTPVDEEPIIQCKRRLNEAVIKEKMMQTDTRLAKLVGNMVAHFYNG 285

Query: 336 HDESKVIGEVLSDNVLSVADPQLVAVLLVFRLLSMIRLLTTFWMMEPLPWFS 181
            ++++++GE + +++++     LVA      + S+I +    W+  P+ WFS
Sbjct: 286 TNDAQLLGEKIVEDLVNSWSIVLVACFCTL-VASLIYIALMRWLSAPILWFS 336


>AE014297-4323|AAN14152.1|  796|Drosophila melanogaster CG11880-PB,
           isoform B protein.
          Length = 796

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 20/112 (17%), Positives = 52/112 (46%), Gaps = 2/112 (1%)
 Frame = -3

Query: 510 SEVHSVVLPQGN--ELPTDEVAVLFLTIAVCKSLVRGIKSGAXXXXXXXXXXXXXXXXSG 337
           ++  ++V+PQ N  + P DE  ++     + +++++                      +G
Sbjct: 226 TDAQALVVPQANGKQTPVDEEPIIQCKRRLNEAVIKEKMMQTDTRLAKLVGNMVAHFYNG 285

Query: 336 HDESKVIGEVLSDNVLSVADPQLVAVLLVFRLLSMIRLLTTFWMMEPLPWFS 181
            ++++++GE + +++++     LVA      + S+I +    W+  P+ WFS
Sbjct: 286 TNDAQLLGEKIVEDLVNSWSIVLVACFCTL-VASLIYIALMRWLSAPILWFS 336


>AE014297-4322|AAF56859.1|  796|Drosophila melanogaster CG11880-PA,
           isoform A protein.
          Length = 796

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 20/112 (17%), Positives = 52/112 (46%), Gaps = 2/112 (1%)
 Frame = -3

Query: 510 SEVHSVVLPQGN--ELPTDEVAVLFLTIAVCKSLVRGIKSGAXXXXXXXXXXXXXXXXSG 337
           ++  ++V+PQ N  + P DE  ++     + +++++                      +G
Sbjct: 226 TDAQALVVPQANGKQTPVDEEPIIQCKRRLNEAVIKEKMMQTDTRLAKLVGNMVAHFYNG 285

Query: 336 HDESKVIGEVLSDNVLSVADPQLVAVLLVFRLLSMIRLLTTFWMMEPLPWFS 181
            ++++++GE + +++++     LVA      + S+I +    W+  P+ WFS
Sbjct: 286 TNDAQLLGEKIVEDLVNSWSIVLVACFCTL-VASLIYIALMRWLSAPILWFS 336


>AY094843-1|AAM11196.1|  547|Drosophila melanogaster RE01910p
           protein.
          Length = 547

 Score = 29.5 bits (63), Expect = 5.6
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +3

Query: 507 QIHNTKYNQYLKLSSTTDCNTSRPCYIRHQHRRHHQG 617
           Q+HN+  N  + LS   + N + P +  HQH  HH G
Sbjct: 463 QVHNSHSNLNIGLSHHNNNNNNLPPH--HQHLHHHPG 497


>AY061833-1|AAL27644.1|  998|Drosophila melanogaster SD07678p protein.
          Length = 998

 Score = 29.5 bits (63), Expect = 5.6
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +3

Query: 507  QIHNTKYNQYLKLSSTTDCNTSRPCYIRHQHRRHHQG 617
            Q+HN+  N  + LS   + N + P +  HQH  HH G
Sbjct: 914  QVHNSHSNLNIGLSHHNNNNNNLPPH--HQHLHHHPG 948


>AL133505-3|CAB65842.1|  649|Drosophila melanogaster EG:BACH59J11.2
           protein.
          Length = 649

 Score = 29.5 bits (63), Expect = 5.6
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +3

Query: 507 QIHNTKYNQYLKLSSTTDCNTSRPCYIRHQHRRHHQG 617
           Q+HN+  N  + LS   + N + P +  HQH  HH G
Sbjct: 565 QVHNSHSNLNIGLSHHNNNNNNLPPH--HQHLHHHPG 599


>AE014298-401|AAF45782.2|  547|Drosophila melanogaster CG32796-PA,
           isoform A protein.
          Length = 547

 Score = 29.5 bits (63), Expect = 5.6
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +3

Query: 507 QIHNTKYNQYLKLSSTTDCNTSRPCYIRHQHRRHHQG 617
           Q+HN+  N  + LS   + N + P +  HQH  HH G
Sbjct: 463 QVHNSHSNLNIGLSHHNNNNNNLPPH--HQHLHHHPG 497


>AE014298-400|AAF45784.2|  998|Drosophila melanogaster CG32796-PB,
            isoform B protein.
          Length = 998

 Score = 29.5 bits (63), Expect = 5.6
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +3

Query: 507  QIHNTKYNQYLKLSSTTDCNTSRPCYIRHQHRRHHQG 617
            Q+HN+  N  + LS   + N + P +  HQH  HH G
Sbjct: 914  QVHNSHSNLNIGLSHHNNNNNNLPPH--HQHLHHHPG 948


>BT030255-1|ABN49394.1|  424|Drosophila melanogaster IP18339p
           protein.
          Length = 424

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = +2

Query: 200 SIIQNVVNNLIIDKS--RNTRSTATSCGSATDSTLSE-STSPITLDSS 334
           ++      +++ D S    T STAT+    TDST++E  T+  T DS+
Sbjct: 89  TVTSTATTDIVTDSSTLETTESTATTTAETTDSTVTEILTTQFTTDST 136


>BT030205-1|ABN49344.1|  424|Drosophila melanogaster IP18039p
           protein.
          Length = 424

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = +2

Query: 200 SIIQNVVNNLIIDKS--RNTRSTATSCGSATDSTLSE-STSPITLDSS 334
           ++      +++ D S    T STAT+    TDST++E  T+  T DS+
Sbjct: 89  TVTSTATTDIVTDSSTLETTESTATTTAETTDSTVTEILTTQFTTDST 136


>AY102651-1|AAM27480.1|  602|Drosophila melanogaster GH01517p
           protein.
          Length = 602

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 18/54 (33%), Positives = 23/54 (42%)
 Frame = +1

Query: 127 QQHPHR*LRQRCPSELGIREPRQGLHHPECS*QPDH*QESEHQEYCYKLWVGNG 288
           QQH    LRQR  +    +  RQ  HH     QP+      +   C +LW G G
Sbjct: 11  QQHQRTNLRQRAAAVATSKARRQRQHHL----QPESTDSPPYSTDCIRLWPGCG 60


>AE014298-2549|AAF48717.1|  347|Drosophila melanogaster CG12996-PA
           protein.
          Length = 347

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
 Frame = +3

Query: 546 SSTTDCNTS-RPCYIRHQHRRHHQGAVVPPAHEVRK-----RRSCSFIYNREYNDAXKLR 707
           S +  CN++       HQ++ ++Q    PPAH+ +K        C+  + R+Y+D    R
Sbjct: 43  SGSNGCNSNTNNSSNSHQNKSNNQQTYAPPAHKPKKLHEYTAADCNAAFLRKYHDLSISR 102

Query: 708 -RXVDAFRE 731
            R +D  RE
Sbjct: 103 DREMDRDRE 111


>AE014297-1927|AAF55121.3|  602|Drosophila melanogaster CG33485-PA
           protein.
          Length = 602

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 18/54 (33%), Positives = 23/54 (42%)
 Frame = +1

Query: 127 QQHPHR*LRQRCPSELGIREPRQGLHHPECS*QPDH*QESEHQEYCYKLWVGNG 288
           QQH    LRQR  +    +  RQ  HH     QP+      +   C +LW G G
Sbjct: 11  QQHQRTNLRQRAAAVATSKARRQRQHHL----QPESTDSPPYSTDCIRLWPGCG 60


>X07278-1|CAA30259.1|  622|Drosophila melanogaster protein (
           Drosophila mRNA fornuclear lamin Dm0. ).
          Length = 622

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
 Frame = +2

Query: 104 KELEEKLYNSILTGDYDSAVRQSL-----EYENQGKGSIIQNVVNNLIIDKSRNTRSTAT 268
           K+ E    +  L+ +YD+ ++QSL     +YE Q +  I ++ + +LI DK +  +  A 
Sbjct: 245 KQTEYSEIDGRLSSEYDAKLKQSLQDVRAQYEEQMQ--INRDEIQSLIEDKIQRLQEAAA 302

Query: 269 SCGSATDSTLSESTS 313
              ++T  ++ E  S
Sbjct: 303 RTSNSTHKSIEELRS 317


>AF145687-1|AAD38662.1| 1146|Drosophila melanogaster BcDNA.LD24702
           protein.
          Length = 1146

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 21/85 (24%), Positives = 40/85 (47%)
 Frame = +2

Query: 56  SAGVTEMSAGSMSSSNKELEEKLYNSILTGDYDSAVRQSLEYENQGKGSIIQNVVNNLII 235
           +A ++  +   +++   E+E  + NS+L GD D     SL    Q +   I N+V+N   
Sbjct: 257 TATLSTQALKKIAAPTSEIETSVSNSVLAGDPDF----SLGNYFQTRSENIWNIVSNSSP 312

Query: 236 DKSRNTRSTATSCGSATDSTLSEST 310
           ++SR  +       + T  ++ E T
Sbjct: 313 NRSRTNQPLLEPESNVTLDSVGEKT 337


>AE014296-2767|AAF49440.2| 1146|Drosophila melanogaster CG17286-PA
           protein.
          Length = 1146

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 21/85 (24%), Positives = 40/85 (47%)
 Frame = +2

Query: 56  SAGVTEMSAGSMSSSNKELEEKLYNSILTGDYDSAVRQSLEYENQGKGSIIQNVVNNLII 235
           +A ++  +   +++   E+E  + NS+L GD D     SL    Q +   I N+V+N   
Sbjct: 257 TATLSTQALKKIAAPTSEIETSVSNSVLAGDPDF----SLGNYFQTRSENIWNIVSNSSP 312

Query: 236 DKSRNTRSTATSCGSATDSTLSEST 310
           ++SR  +       + T  ++ E T
Sbjct: 313 NRSRTNQPLLEPESNVTLDSVGEKT 337


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,526,585
Number of Sequences: 53049
Number of extensions: 663630
Number of successful extensions: 3138
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3121
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3716337612
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)