Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0219.Seq
         (797 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             28   0.087
AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    24   1.9  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   5.7  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   7.6  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      22   7.6  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 28.3 bits (60), Expect = 0.087
 Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
 Frame = +2

Query: 53   VSAGVTEMSAGSMSSSNKELEEKLYNSILTGDYDSAVRQSLEYENQGKGSIIQNVV-NNL 229
            V AG+ E SAG+ +S       K+   +  G YD +       +N  + S+   +  +  
Sbjct: 1242 VGAGIAETSAGTSNSRGAAQMSKVPRDVSEGIYDGSGANGSFLDNLIRSSLETGIPRDQR 1301

Query: 230  IIDKSRNTRSTATSCGSATDSTLSES 307
             + ++RN +  A+S     +S  S++
Sbjct: 1302 AMTEARNQQQQASSQQQIPESMRSKA 1327


>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 14/49 (28%), Positives = 25/49 (51%)
 Frame = +2

Query: 131 SILTGDYDSAVRQSLEYENQGKGSIIQNVVNNLIIDKSRNTRSTATSCG 277
           +I++ D+D +     EY    +   I +V N   +DKS  + +T  +CG
Sbjct: 72  NIISSDHDDSDE---EYAANSQPPRITSVPNTSRLDKSEISLATKQACG 117


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = -2

Query: 298 QCAVRCRPTACSSTPGVPTLVNDQVVNYILDD 203
           Q A  C P+      GVPT V     + + DD
Sbjct: 389 QFATPCTPSPPRGPGGVPTSVIQAATSSVSDD 420


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 203 WSPCLGSRIPSSDGQRCRSHR 141
           + P LG  +  S GQ+ R+HR
Sbjct: 118 FKPWLGDGLLISTGQKWRNHR 138


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = +3

Query: 576 PCYIRHQHRRHHQ 614
           P Y  H H  HHQ
Sbjct: 68  PIYQSHHHLHHHQ 80


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,753
Number of Sequences: 438
Number of extensions: 4421
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25246416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)