Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0218.Seq
         (847 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY865071-2|AAW79474.1|  629|Drosophila melanogaster SR-CI protein.     30   4.6  
AY865067-2|AAW79466.1|  632|Drosophila melanogaster SR-CI protein.     29   8.0  
AY865066-2|AAW79464.1|  632|Drosophila melanogaster SR-CI protein.     29   8.0  
AY865062-2|AAW79456.1|  632|Drosophila melanogaster SR-CI protein.     29   8.0  
AY864368-1|AAX38006.1|  575|Drosophila melanogaster scavenger re...    29   8.0  
AY349704-1|AAQ75563.1|  601|Drosophila melanogaster Sr-CI protein.     29   8.0  
AY349701-1|AAQ75560.1|  601|Drosophila melanogaster Sr-CI protein.     29   8.0  

>AY865071-2|AAW79474.1|  629|Drosophila melanogaster SR-CI protein.
          Length = 629

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 17/59 (28%), Positives = 28/59 (47%)
 Frame = +1

Query: 469 SSLPCGXTTECTSNPQH*VQPST*KLSSTTDCNTQEPCYIRAPTTADTTRGAVGSFQPT 645
           SS+P   T+  TS  +    P+T   ++T+   T+ P      T A TT+    + +PT
Sbjct: 394 SSVPPTVTSTSTSTTRKSTTPTTTSTTTTSTTTTKRPTTAATTTKATTTKRTTTTKKPT 452


>AY865067-2|AAW79466.1|  632|Drosophila melanogaster SR-CI protein.
          Length = 632

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 18/59 (30%), Positives = 27/59 (45%)
 Frame = +1

Query: 469 SSLPCGXTTECTSNPQH*VQPST*KLSSTTDCNTQEPCYIRAPTTADTTRGAVGSFQPT 645
           SSLP   T+  TS  +     +T   +ST+   T+ P      T A TT+    + +PT
Sbjct: 394 SSLPPTVTSTSTSTTRKSTTTTTTSTTSTSTTTTKRPTTTTTTTKATTTKRTTTTKKPT 452


>AY865066-2|AAW79464.1|  632|Drosophila melanogaster SR-CI protein.
          Length = 632

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 18/59 (30%), Positives = 27/59 (45%)
 Frame = +1

Query: 469 SSLPCGXTTECTSNPQH*VQPST*KLSSTTDCNTQEPCYIRAPTTADTTRGAVGSFQPT 645
           SSLP   T+  TS  +     +T   +ST+   T+ P      T A TT+    + +PT
Sbjct: 394 SSLPPTVTSTSTSTTRKSTTTTTTSTTSTSTTTTKRPTTTTTTTKATTTKRTTTTKKPT 452


>AY865062-2|AAW79456.1|  632|Drosophila melanogaster SR-CI protein.
          Length = 632

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 18/59 (30%), Positives = 27/59 (45%)
 Frame = +1

Query: 469 SSLPCGXTTECTSNPQH*VQPST*KLSSTTDCNTQEPCYIRAPTTADTTRGAVGSFQPT 645
           SSLP   T+  TS  +     +T   +ST+   T+ P      T A TT+    + +PT
Sbjct: 394 SSLPPTVTSTSTSTTRKSTTTTTTSTTSTSTTTTKRPTTTTTTTKATTTKRTTTTKKPT 452


>AY864368-1|AAX38006.1|  575|Drosophila melanogaster scavenger
           receptor protein.
          Length = 575

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 18/59 (30%), Positives = 27/59 (45%)
 Frame = +1

Query: 469 SSLPCGXTTECTSNPQH*VQPST*KLSSTTDCNTQEPCYIRAPTTADTTRGAVGSFQPT 645
           SSLP   T+  TS  +     +T   +ST+   T+ P      T A TT+    + +PT
Sbjct: 337 SSLPPTVTSTSTSTTRKSTTTTTTSTTSTSTTTTKRPTTTTTTTKATTTKRTTTTKKPT 395


>AY349704-1|AAQ75563.1|  601|Drosophila melanogaster Sr-CI protein.
          Length = 601

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 18/59 (30%), Positives = 27/59 (45%)
 Frame = +1

Query: 469 SSLPCGXTTECTSNPQH*VQPST*KLSSTTDCNTQEPCYIRAPTTADTTRGAVGSFQPT 645
           SSLP   T+  TS  +     +T   +ST+   T+ P      T A TT+    + +PT
Sbjct: 393 SSLPPTVTSTSTSTTRKSTTTTTTSTTSTSTTTTKRPTTTTTTTKATTTKRTTTTKKPT 451


>AY349701-1|AAQ75560.1|  601|Drosophila melanogaster Sr-CI protein.
          Length = 601

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 18/59 (30%), Positives = 27/59 (45%)
 Frame = +1

Query: 469 SSLPCGXTTECTSNPQH*VQPST*KLSSTTDCNTQEPCYIRAPTTADTTRGAVGSFQPT 645
           SSLP   T+  TS  +     +T   +ST+   T+ P      T A TT+    + +PT
Sbjct: 393 SSLPPTVTSTSTSTTRKSTTTTTTSTTSTSTTTTKRPTTTTTTTKATTTKRTTTTKKPT 451


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,167,813
Number of Sequences: 53049
Number of extensions: 607483
Number of successful extensions: 1501
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1501
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4044853644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)