Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0217.Seq
(797 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006708-19|AAF60423.3| 588|Caenorhabditis elegans Mtm (myotubu... 74 1e-13
AY313178-1|AAP79303.1| 569|Caenorhabditis elegans myotubularin-... 40 0.003
AC024770-4|AAT68891.1| 521|Caenorhabditis elegans Mtm (myotubul... 40 0.003
AC024770-3|AAK84604.1| 569|Caenorhabditis elegans Mtm (myotubul... 40 0.003
Z81546-10|CAH10812.1| 674|Caenorhabditis elegans Hypothetical p... 38 0.011
Z81546-9|CAD45596.2| 782|Caenorhabditis elegans Hypothetical pr... 38 0.011
Z81546-8|CAB04456.1| 676|Caenorhabditis elegans Hypothetical pr... 38 0.011
Z49072-2|CAB61017.2| 1006|Caenorhabditis elegans Hypothetical pr... 38 0.011
Z49072-1|CAA88884.1| 938|Caenorhabditis elegans Hypothetical pr... 38 0.011
AY313179-1|AAP79304.1| 782|Caenorhabditis elegans myotubularin-... 38 0.011
AY313177-1|AAP79302.1| 676|Caenorhabditis elegans myotubularin-... 38 0.011
AF031519-1|AAC78763.1| 930|Caenorhabditis elegans myotubularin ... 38 0.011
U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical p... 30 2.2
AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm (myotubu... 29 2.9
>AC006708-19|AAF60423.3| 588|Caenorhabditis elegans Mtm
(myotubularin) family protein 1 protein.
Length = 588
Score = 73.7 bits (173), Expect = 1e-13
Identities = 35/74 (47%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
Frame = +2
Query: 293 LSVPLGVVSRIEKVG----GASSKGENSYGIEIFCKDMRNLRFAHRQENHSRRGIFEKLQ 460
L +PLG VSRIEKVG + +G+++YG I+CKD R RF + R+ + + L
Sbjct: 77 LDIPLGQVSRIEKVGRKTTSVAKRGDDNYGFTIYCKDYRVYRFTCNPASSDRKNVCDSLN 136
Query: 461 QLAFPLSHRLPMFA 502
+ AFPLSH LPMFA
Sbjct: 137 RYAFPLSHNLPMFA 150
>AY313178-1|AAP79303.1| 569|Caenorhabditis elegans
myotubularin-related protein MTM-9 protein.
Length = 569
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +2
Query: 596 RITRINDKYEVCDSYPSIWAVPSAADDDLLRSVATFRSRG 715
RI+ +N+ + +C +YP VP DD L+ ATFR G
Sbjct: 155 RISSVNENFAICPTYPEKLIVPKGIGDDYLKISATFREGG 194
>AC024770-4|AAT68891.1| 521|Caenorhabditis elegans Mtm
(myotubularin) family protein9, isoform b protein.
Length = 521
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +2
Query: 596 RITRINDKYEVCDSYPSIWAVPSAADDDLLRSVATFRSRG 715
RI+ +N+ + +C +YP VP DD L+ ATFR G
Sbjct: 107 RISSVNENFAICPTYPEKLIVPKGIGDDYLKISATFREGG 146
>AC024770-3|AAK84604.1| 569|Caenorhabditis elegans Mtm
(myotubularin) family protein9, isoform a protein.
Length = 569
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +2
Query: 596 RITRINDKYEVCDSYPSIWAVPSAADDDLLRSVATFRSRG 715
RI+ +N+ + +C +YP VP DD L+ ATFR G
Sbjct: 155 RISSVNENFAICPTYPEKLIVPKGIGDDYLKISATFREGG 194
>Z81546-10|CAH10812.1| 674|Caenorhabditis elegans Hypothetical
protein F53A2.8c protein.
Length = 674
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 602 TRINDKYEVCDSYPSIWAVPSAADDDLLRSVATFRSRG 715
+ IN+ Y +CD+YP+ P+AA +L FRSRG
Sbjct: 146 SNINEGYTICDTYPNKLWFPTAASTSVLLGSCKFRSRG 183
>Z81546-9|CAD45596.2| 782|Caenorhabditis elegans Hypothetical
protein F53A2.8b protein.
Length = 782
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 602 TRINDKYEVCDSYPSIWAVPSAADDDLLRSVATFRSRG 715
+ IN+ Y +CD+YP+ P+AA +L FRSRG
Sbjct: 254 SNINEGYTICDTYPNKLWFPTAASTSVLLGSCKFRSRG 291
>Z81546-8|CAB04456.1| 676|Caenorhabditis elegans Hypothetical
protein F53A2.8a protein.
Length = 676
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 602 TRINDKYEVCDSYPSIWAVPSAADDDLLRSVATFRSRG 715
+ IN+ Y +CD+YP+ P+AA +L FRSRG
Sbjct: 148 SNINEGYTICDTYPNKLWFPTAASTSVLLGSCKFRSRG 185
>Z49072-2|CAB61017.2| 1006|Caenorhabditis elegans Hypothetical
protein T24A11.1b protein.
Length = 1006
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2
Query: 596 RITRINDKYEVCDSYPSIWAVPSAADDDLLRSVATFRSRG 715
+I+ +N+ +EVC +YP VP DD +R A +RS G
Sbjct: 269 QISSVNENFEVCPTYPEKIIVPKGITDDDIRKGAPYRSIG 308
>Z49072-1|CAA88884.1| 938|Caenorhabditis elegans Hypothetical
protein T24A11.1a protein.
Length = 938
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2
Query: 596 RITRINDKYEVCDSYPSIWAVPSAADDDLLRSVATFRSRG 715
+I+ +N+ +EVC +YP VP DD +R A +RS G
Sbjct: 265 QISSVNENFEVCPTYPEKIIVPKGITDDDIRKGAPYRSIG 304
>AY313179-1|AAP79304.1| 782|Caenorhabditis elegans
myotubularin-related protein MTM-6B protein.
Length = 782
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 602 TRINDKYEVCDSYPSIWAVPSAADDDLLRSVATFRSRG 715
+ IN+ Y +CD+YP+ P+AA +L FRSRG
Sbjct: 254 SNINEGYTICDTYPNKLWFPTAASTSVLLGSCKFRSRG 291
>AY313177-1|AAP79302.1| 676|Caenorhabditis elegans
myotubularin-related protein MTM-6A protein.
Length = 676
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 602 TRINDKYEVCDSYPSIWAVPSAADDDLLRSVATFRSRG 715
+ IN+ Y +CD+YP+ P+AA +L FRSRG
Sbjct: 148 SNINEGYTICDTYPNKLWFPTAASTSVLLGSCKFRSRG 185
>AF031519-1|AAC78763.1| 930|Caenorhabditis elegans myotubularin
homologous protein 1 protein.
Length = 930
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2
Query: 596 RITRINDKYEVCDSYPSIWAVPSAADDDLLRSVATFRSRG 715
+I+ +N+ +EVC +YP VP DD +R A +RS G
Sbjct: 269 QISSVNENFEVCPTYPEKIIVPKGITDDDIRKGAPYRSIG 308
>U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical
protein F13H8.7 protein.
Length = 387
Score = 29.9 bits (64), Expect = 2.2
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = +2
Query: 269 DPSATLGTLSVPL-GVVSRIEKVGG-ASSKGENSYGIEIFCKDMRNLRFAHRQENHSRRG 442
+PSAT+G LS PL G+ +R + + G N G E+F + + + Q H G
Sbjct: 257 NPSATVGALSEPLWGIEARNAAIANHVFTVGINRVGTEVFPNEFTS---GNGQPAHKDFG 313
Query: 443 IFEKLQQLAFPLSHRLP 493
F +A P R P
Sbjct: 314 HFYGSSYIAAPDGSRTP 330
>AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm
(myotubularin) family protein 5 protein.
Length = 1744
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 596 RITRINDKYEVCDSYPSIWAVPSAADDDLLRSVA 697
R++ N Y +C SYP + VPS ++ L VA
Sbjct: 1019 RMSHSNLDYTICPSYPGNFIVPSETNESELAKVA 1052
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,368,696
Number of Sequences: 27780
Number of extensions: 402340
Number of successful extensions: 1040
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1039
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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