Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0214.Seq
         (599 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7R708 Cluster: Chromosome undetermined scaffold_1520, ...    33   6.8  

>UniRef50_A7R708 Cluster: Chromosome undetermined scaffold_1520,
           whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
           Chromosome undetermined scaffold_1520, whole genome
           shotgun sequence - Vitis vinifera (Grape)
          Length = 207

 Score = 32.7 bits (71), Expect = 6.8
 Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
 Frame = +1

Query: 340 KASCMK-----NARRLDNE-DPPDVELNERRPPNSLFSSSNLRVYQGTGD 471
           K SC K     N RR  N+ DPP  E + R+PPNS  ++S+L+  + + D
Sbjct: 142 KRSCRKRLAGHNQRRRKNQPDPPHTE-DRRKPPNSKMNASSLKATEHSDD 190


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 513,634,948
Number of Sequences: 1657284
Number of extensions: 9237599
Number of successful extensions: 20925
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 20354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20921
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42317807226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)