Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0210.Seq
(797 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 75 1e-13
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 75 1e-13
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 69 1e-11
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 68 1e-11
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 67 2e-11
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 67 2e-11
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 67 2e-11
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 67 2e-11
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 67 2e-11
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 65 9e-11
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 64 2e-10
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 63 5e-10
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 62 1e-09
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 62 1e-09
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 62 1e-09
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 62 1e-09
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 57 2e-08
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 53 5e-07
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 53 5e-07
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 53 5e-07
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 45 1e-04
BT023498-1|AAY84898.1| 1190|Drosophila melanogaster LD32453p pro... 31 2.4
AY069344-1|AAL39489.2| 985|Drosophila melanogaster LD05471p pro... 31 2.4
AF179287-1|AAD52673.1| 1179|Drosophila melanogaster SMC2 protein. 31 2.4
AE013599-1965|AAF58197.1| 1179|Drosophila melanogaster CG10212-P... 31 2.4
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 29 9.7
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 74.5 bits (175), Expect = 1e-13
Identities = 52/195 (26%), Positives = 85/195 (43%)
Frame = +2
Query: 20 RQYTAAVFLDIEKAFERVWHAGLIHKLVQNTDLQHAYVRTAGVVPGGKILL*RGXXRXVV 199
++Y FLDI++AF+RVWH GL++K + Q V + + + G +
Sbjct: 577 KEYAVGAFLDIQQAFDRVWHPGLLYKAKRLFPPQLYLVVKSFLEERTFHVSVDGYKSSI- 635
Query: 200 GAPSHGRSSSGKRPGSIPHALYTNDIPTLEGNLQAWEVDVKLALFADDSAYFSSSNVPSA 379
P G G ++++ +D+PT + E DV +A +ADD+A + S A
Sbjct: 636 -KPIAAGVPQGSVLGPTLYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKSILA 694
Query: 380 AILRMQRLLDLLPQWLDRWRVAVNVGKTAAILFGXXXXXXXXXXXXXXXANVEFRSSVRY 559
A +Q LD QW + W V +N K A + F + + +Y
Sbjct: 695 ATSGLQEYLDAFQQWAENWNVRINAEKCANVTFANRTGSCPGVSLNGRL--IRHHQAYKY 752
Query: 560 XGVDIDRSXKMTAQR 604
G+ +DR K+T R
Sbjct: 753 LGITLDR--KLTFSR 765
Score = 48.0 bits (109), Expect = 1e-05
Identities = 21/34 (61%), Positives = 27/34 (79%)
Frame = +3
Query: 147 SYLEGRSFFDAVXGAKSSVRPVTAGVPQGSVLAP 248
S+LE R+F +V G KSS++P+ AGVPQGSVL P
Sbjct: 617 SFLEERTFHVSVDGYKSSIKPIAAGVPQGSVLGP 650
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 74.5 bits (175), Expect = 1e-13
Identities = 52/195 (26%), Positives = 85/195 (43%)
Frame = +2
Query: 20 RQYTAAVFLDIEKAFERVWHAGLIHKLVQNTDLQHAYVRTAGVVPGGKILL*RGXXRXVV 199
++Y FLDI++AF+RVWH GL++K + Q V + + + G +
Sbjct: 379 KEYAVGAFLDIQQAFDRVWHPGLLYKAKRLFPPQLYLVVKSFLEERTFHVSVDGYKSSI- 437
Query: 200 GAPSHGRSSSGKRPGSIPHALYTNDIPTLEGNLQAWEVDVKLALFADDSAYFSSSNVPSA 379
P G G ++++ +D+PT + E DV +A +ADD+A + S A
Sbjct: 438 -KPIAAGVPQGSVLGPTLYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKSILA 496
Query: 380 AILRMQRLLDLLPQWLDRWRVAVNVGKTAAILFGXXXXXXXXXXXXXXXANVEFRSSVRY 559
A +Q LD QW + W V +N K A + F + + +Y
Sbjct: 497 ATSGLQEYLDAFQQWAENWNVRINAEKCANVTFANRTGSCPGVSLNGRL--IRHHQAYKY 554
Query: 560 XGVDIDRSXKMTAQR 604
G+ +DR K+T R
Sbjct: 555 LGITLDR--KLTFSR 567
Score = 48.0 bits (109), Expect = 1e-05
Identities = 21/34 (61%), Positives = 27/34 (79%)
Frame = +3
Query: 147 SYLEGRSFFDAVXGAKSSVRPVTAGVPQGSVLAP 248
S+LE R+F +V G KSS++P+ AGVPQGSVL P
Sbjct: 419 SFLEERTFHVSVDGYKSSIKPIAAGVPQGSVLGP 452
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 68.5 bits (160), Expect = 1e-11
Identities = 40/153 (26%), Positives = 73/153 (47%)
Frame = +2
Query: 20 RQYTAAVFLDIEKAFERVWHAGLIHKLVQNTDLQHAYVRTAGVVPGGKILL*RGXXRXVV 199
++Y +AVFLDI +AF+RVWH GL+ KL + + + + + +
Sbjct: 632 KEYCSAVFLDISEAFDRVWHEGLLLKLAKILPYNLYIILESYLTNRTFEVKDQAGETSRT 691
Query: 200 GAPSHGRSSSGKRPGSIPHALYTNDIPTLEGNLQAWEVDVKLALFADDSAYFSSSNVPSA 379
G G G G + ++++++D+P + + L+ +ADD+ SS + +A
Sbjct: 692 GQIGAG-VPQGSNLGPLLYSIFSSDMPLPYIYRPSPTQRIMLSTYADDTIVLSSDTLATA 750
Query: 380 AILRMQRLLDLLPQWLDRWRVAVNVGKTAAILF 478
A + L W D+W ++VN KT ++F
Sbjct: 751 ATRNNENYLKTFSDWADKWGISVNAAKTGHVIF 783
Score = 28.7 bits (61), Expect = 9.7
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 138 LLGSYLEGRSF-FDAVXGAKSSVRPVTAGVPQGSVLAP 248
+L SYL R+F G S + AGVPQGS L P
Sbjct: 669 ILESYLTNRTFEVKDQAGETSRTGQIGAGVPQGSNLGP 706
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 68.1 bits (159), Expect = 1e-11
Identities = 40/153 (26%), Positives = 73/153 (47%)
Frame = +2
Query: 20 RQYTAAVFLDIEKAFERVWHAGLIHKLVQNTDLQHAYVRTAGVVPGGKILL*RGXXRXVV 199
++Y +AVFLDI +AF+RVWH GL+ KL + + + + + +
Sbjct: 620 KEYCSAVFLDISEAFDRVWHEGLLLKLAKILPYNLYIILESYLTNRTFEVKDQAGETSRT 679
Query: 200 GAPSHGRSSSGKRPGSIPHALYTNDIPTLEGNLQAWEVDVKLALFADDSAYFSSSNVPSA 379
G G G G + ++++++D+P + + L+ +ADD+ SS + +A
Sbjct: 680 GQIGAG-VPQGSNLGPLLYSIFSSDMPLPYIYRPSPTERIMLSTYADDTIVLSSDTLATA 738
Query: 380 AILRMQRLLDLLPQWLDRWRVAVNVGKTAAILF 478
A + L W D+W ++VN KT ++F
Sbjct: 739 ATRNNENYLKSFSDWADKWGISVNAAKTGHVIF 771
Score = 28.7 bits (61), Expect = 9.7
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 138 LLGSYLEGRSF-FDAVXGAKSSVRPVTAGVPQGSVLAP 248
+L SYL R+F G S + AGVPQGS L P
Sbjct: 657 ILESYLTNRTFEVKDQAGETSRTGQIGAGVPQGSNLGP 694
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 67.3 bits (157), Expect = 2e-11
Identities = 40/153 (26%), Positives = 73/153 (47%)
Frame = +2
Query: 20 RQYTAAVFLDIEKAFERVWHAGLIHKLVQNTDLQHAYVRTAGVVPGGKILL*RGXXRXVV 199
++Y +AVFLDI +AF+RVWH GL+ KL + + + + + +
Sbjct: 504 KEYCSAVFLDISEAFDRVWHEGLLLKLAKILPYNLYIILESYLTNRTFEVKDQAGETSRA 563
Query: 200 GAPSHGRSSSGKRPGSIPHALYTNDIPTLEGNLQAWEVDVKLALFADDSAYFSSSNVPSA 379
G G G G I ++++++D+P + + L+ +ADD+ SS + +A
Sbjct: 564 GQIGAG-VPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATA 622
Query: 380 AILRMQRLLDLLPQWLDRWRVAVNVGKTAAILF 478
A + L W D+W ++VN KT +++
Sbjct: 623 ATRNNENYLKTFSDWADKWGISVNAAKTGHVIY 655
Score = 28.7 bits (61), Expect = 9.7
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 138 LLGSYLEGRSF-FDAVXGAKSSVRPVTAGVPQGSVLAP 248
+L SYL R+F G S + AGVPQGS L P
Sbjct: 541 ILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGP 578
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 67.3 bits (157), Expect = 2e-11
Identities = 40/153 (26%), Positives = 73/153 (47%)
Frame = +2
Query: 20 RQYTAAVFLDIEKAFERVWHAGLIHKLVQNTDLQHAYVRTAGVVPGGKILL*RGXXRXVV 199
++Y +AVFLDI +AF+RVWH GL+ KL + + + + + +
Sbjct: 620 KEYCSAVFLDISEAFDRVWHEGLLLKLAKILPYNLYIILESYLTNRTFEVKDQAGETSRA 679
Query: 200 GAPSHGRSSSGKRPGSIPHALYTNDIPTLEGNLQAWEVDVKLALFADDSAYFSSSNVPSA 379
G G G G I ++++++D+P + + L+ +ADD+ SS + +A
Sbjct: 680 GQIGAG-VPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATA 738
Query: 380 AILRMQRLLDLLPQWLDRWRVAVNVGKTAAILF 478
A + L W D+W ++VN KT +++
Sbjct: 739 ATRNNENYLKTFSDWADKWGISVNAAKTGHVIY 771
Score = 28.7 bits (61), Expect = 9.7
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 138 LLGSYLEGRSF-FDAVXGAKSSVRPVTAGVPQGSVLAP 248
+L SYL R+F G S + AGVPQGS L P
Sbjct: 657 ILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGP 694
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 67.3 bits (157), Expect = 2e-11
Identities = 40/153 (26%), Positives = 73/153 (47%)
Frame = +2
Query: 20 RQYTAAVFLDIEKAFERVWHAGLIHKLVQNTDLQHAYVRTAGVVPGGKILL*RGXXRXVV 199
++Y +AVFLDI +AF+RVWH GL+ KL + + + + + +
Sbjct: 620 KEYCSAVFLDISEAFDRVWHEGLLLKLAKILPYNLYIILESYLTNRTFEVKDQAGETSRA 679
Query: 200 GAPSHGRSSSGKRPGSIPHALYTNDIPTLEGNLQAWEVDVKLALFADDSAYFSSSNVPSA 379
G G G G I ++++++D+P + + L+ +ADD+ SS + +A
Sbjct: 680 GQIGAG-VPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATA 738
Query: 380 AILRMQRLLDLLPQWLDRWRVAVNVGKTAAILF 478
A + L W D+W ++VN KT +++
Sbjct: 739 ATRNNENYLKTFSDWADKWGISVNAAKTGHVIY 771
Score = 28.7 bits (61), Expect = 9.7
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 138 LLGSYLEGRSF-FDAVXGAKSSVRPVTAGVPQGSVLAP 248
+L SYL R+F G S + AGVPQGS L P
Sbjct: 657 ILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGP 694
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 67.3 bits (157), Expect = 2e-11
Identities = 40/153 (26%), Positives = 73/153 (47%)
Frame = +2
Query: 20 RQYTAAVFLDIEKAFERVWHAGLIHKLVQNTDLQHAYVRTAGVVPGGKILL*RGXXRXVV 199
++Y +AVFLDI +AF+RVWH GL+ KL + + + + + +
Sbjct: 582 KEYCSAVFLDISEAFDRVWHEGLLLKLAKILPYNLYIILESYLTNRTFEVKDQAGETSRA 641
Query: 200 GAPSHGRSSSGKRPGSIPHALYTNDIPTLEGNLQAWEVDVKLALFADDSAYFSSSNVPSA 379
G G G G I ++++++D+P + + L+ +ADD+ SS + +A
Sbjct: 642 GQIGAG-VPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATA 700
Query: 380 AILRMQRLLDLLPQWLDRWRVAVNVGKTAAILF 478
A + L W D+W ++VN KT +++
Sbjct: 701 ATRNNENYLKTFSDWADKWGISVNAAKTGHVIY 733
Score = 28.7 bits (61), Expect = 9.7
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 138 LLGSYLEGRSF-FDAVXGAKSSVRPVTAGVPQGSVLAP 248
+L SYL R+F G S + AGVPQGS L P
Sbjct: 619 ILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGP 656
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 67.3 bits (157), Expect = 2e-11
Identities = 40/153 (26%), Positives = 73/153 (47%)
Frame = +2
Query: 20 RQYTAAVFLDIEKAFERVWHAGLIHKLVQNTDLQHAYVRTAGVVPGGKILL*RGXXRXVV 199
++Y +AVFLDI +AF+RVWH GL+ KL + + + + + +
Sbjct: 620 KEYCSAVFLDISEAFDRVWHEGLLLKLAKILPYNLYIILESYLTNRTFEVKDQAGETSRA 679
Query: 200 GAPSHGRSSSGKRPGSIPHALYTNDIPTLEGNLQAWEVDVKLALFADDSAYFSSSNVPSA 379
G G G G I ++++++D+P + + L+ +ADD+ SS + +A
Sbjct: 680 GQIGAG-VPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATA 738
Query: 380 AILRMQRLLDLLPQWLDRWRVAVNVGKTAAILF 478
A + L W D+W ++VN KT +++
Sbjct: 739 ATRNNENYLKTFSDWADKWGISVNAAKTGHVIY 771
Score = 28.7 bits (61), Expect = 9.7
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 138 LLGSYLEGRSF-FDAVXGAKSSVRPVTAGVPQGSVLAP 248
+L SYL R+F G S + AGVPQGS L P
Sbjct: 657 ILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGP 694
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 65.3 bits (152), Expect = 9e-11
Identities = 48/187 (25%), Positives = 79/187 (42%)
Frame = +2
Query: 20 RQYTAAVFLDIEKAFERVWHAGLIHKLVQNTDLQHAYVRTAGVVPGGKILL*RGXXRXVV 199
++Y AVF+D+++AF+RVWH GLI K+ + + Y + + ++ R +
Sbjct: 576 KEYCNAVFIDMQQAFDRVWHDGLISKVKKLFPAPY-YGVLKSYLEDRRFMV-RVRNSYSI 633
Query: 200 GAPSHGRSSSGKRPGSIPHALYTNDIPTLEGNLQAWEVDVKLALFADDSAYFSSSNVPSA 379
G G + ++++T D+P A LA +ADD A SSN +
Sbjct: 634 PRVMRAGVPQGSVLGPLLYSVFTADLPCPNAYHMADPRKALLATYADDIALLYSSNCCNE 693
Query: 380 AILRMQRLLDLLPQWLDRWRVAVNVGKTAAILFGXXXXXXXXXXXXXXXANVEFRSSVRY 559
A +Q L L W RW + VN KT F ++ S +Y
Sbjct: 694 AARGLQEYLTTLAAWCKRWILKVNPQKTINPCFTLKTLSPVTAPIELEGVILDQPSQAKY 753
Query: 560 XGVDIDR 580
G+ +D+
Sbjct: 754 LGITLDK 760
Score = 37.9 bits (84), Expect = 0.016
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +3
Query: 138 LLGSYLEGRSFFDAVXGAKSSVRPVTAGVPQGSVLAP 248
+L SYLE R F V + S R + AGVPQGSVL P
Sbjct: 613 VLKSYLEDRRFMVRVRNSYSIPRVMRAGVPQGSVLGP 649
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 64.1 bits (149), Expect = 2e-10
Identities = 45/153 (29%), Positives = 71/153 (46%)
Frame = +2
Query: 20 RQYTAAVFLDIEKAFERVWHAGLIHKLVQNTDLQHAYVRTAGVVPGGKILL*RGXXRXVV 199
R+Y A+FLD+ +AF+RVW GL+ K+++ Q+ + + ++ R
Sbjct: 571 REYCTAIFLDVAQAFDRVWLDGLLFKIIKLLP-QNTHKLLKSYLYN-RVFAIRCDTSTSR 628
Query: 200 GAPSHGRSSSGKRPGSIPHALYTNDIPTLEGNLQAWEVDVKLALFADDSAYFSSSNVPSA 379
G G I + LYT D P ++ NL + FADD+A S S P
Sbjct: 629 DCAIEAGVPQGSVLGPILYTLYTADFP-IDYNLTT-------STFADDTAILSRSKCPIK 680
Query: 380 AILRMQRLLDLLPQWLDRWRVAVNVGKTAAILF 478
A + R L + +WL WR+++NV K + F
Sbjct: 681 ATALLSRHLTSVERWLADWRISINVQKCKQVTF 713
Score = 31.5 bits (68), Expect = 1.4
Identities = 18/38 (47%), Positives = 21/38 (55%)
Frame = +3
Query: 135 ELLGSYLEGRSFFDAVXGAKSSVRPVTAGVPQGSVLAP 248
+LL SYL R F + S + AGVPQGSVL P
Sbjct: 607 KLLKSYLYNRVFAIRCDTSTSRDCAIEAGVPQGSVLGP 644
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 62.9 bits (146), Expect = 5e-10
Identities = 45/153 (29%), Positives = 70/153 (45%)
Frame = +2
Query: 20 RQYTAAVFLDIEKAFERVWHAGLIHKLVQNTDLQHAYVRTAGVVPGGKILL*RGXXRXVV 199
R+Y A+FLD+ +AF+RVW GL+ K+++ Q+ + + + R
Sbjct: 571 REYCTAIFLDVAQAFDRVWLDGLLFKIIKLLP-QNTHKLLKSYLYNTVFAI-RCDTSTSR 628
Query: 200 GAPSHGRSSSGKRPGSIPHALYTNDIPTLEGNLQAWEVDVKLALFADDSAYFSSSNVPSA 379
G G I + LYT D P ++ NL + FADD+A S S P
Sbjct: 629 DCAIEAGVPQGSVLGPILYTLYTADFP-IDYNLTT-------STFADDTAILSRSKCPIK 680
Query: 380 AILRMQRLLDLLPQWLDRWRVAVNVGKTAAILF 478
A + R L + +WL WR+++NV K + F
Sbjct: 681 ATALLSRHLTSVERWLADWRISINVQKCKQVTF 713
Score = 29.1 bits (62), Expect = 7.4
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = +3
Query: 135 ELLGSYLEGRSFFDAVXGAKSSVRPVTAGVPQGSVLAP 248
+LL SYL F + S + AGVPQGSVL P
Sbjct: 607 KLLKSYLYNTVFAIRCDTSTSRDCAIEAGVPQGSVLGP 644
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 61.7 bits (143), Expect = 1e-09
Identities = 52/164 (31%), Positives = 79/164 (48%), Gaps = 15/164 (9%)
Frame = +2
Query: 32 AAVFLDIEKAFERVWHAGLIHKLVQNT-----DLQHAYV--RTAGVVPGGKILL*RGXXR 190
+A FLDI +AF+RVWH GL++KL + DL Y+ RT V G+ G R
Sbjct: 180 SATFLDITEAFDRVWHDGLLYKLSRLIPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIR 239
Query: 191 XVVGAPSHGRSSSGKRPGSIPHALYTNDIP-----TLEGNLQAWE---VDVKLALFADDS 346
G P G G + +++Y++D+P N+ + ++ LA +ADD+
Sbjct: 240 --AGVPQ------GSILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDT 291
Query: 347 AYFSSSNVPSAAILRMQRLLDLLPQWLDRWRVAVNVGKTAAILF 478
S S AI Q L++ +W +W +A+N KT ILF
Sbjct: 292 IILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILF 335
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 61.7 bits (143), Expect = 1e-09
Identities = 52/164 (31%), Positives = 79/164 (48%), Gaps = 15/164 (9%)
Frame = +2
Query: 32 AAVFLDIEKAFERVWHAGLIHKLVQNT-----DLQHAYV--RTAGVVPGGKILL*RGXXR 190
+A FLDI +AF+RVWH GL++KL + DL Y+ RT V G+ G R
Sbjct: 627 SATFLDITEAFDRVWHDGLLYKLSRLIPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIR 686
Query: 191 XVVGAPSHGRSSSGKRPGSIPHALYTNDIP-----TLEGNLQAWE---VDVKLALFADDS 346
G P G G + +++Y++D+P N+ + ++ LA +ADD+
Sbjct: 687 --AGVPQ------GSILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDT 738
Query: 347 AYFSSSNVPSAAILRMQRLLDLLPQWLDRWRVAVNVGKTAAILF 478
S S AI Q L++ +W +W +A+N KT ILF
Sbjct: 739 IILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILF 782
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 61.7 bits (143), Expect = 1e-09
Identities = 52/164 (31%), Positives = 79/164 (48%), Gaps = 15/164 (9%)
Frame = +2
Query: 32 AAVFLDIEKAFERVWHAGLIHKLVQNT-----DLQHAYV--RTAGVVPGGKILL*RGXXR 190
+A FLDI +AF+RVWH GL++KL + DL Y+ RT V G+ G R
Sbjct: 627 SATFLDITEAFDRVWHDGLLYKLSRLIPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIR 686
Query: 191 XVVGAPSHGRSSSGKRPGSIPHALYTNDIP-----TLEGNLQAWE---VDVKLALFADDS 346
G P G G + +++Y++D+P N+ + ++ LA +ADD+
Sbjct: 687 --AGVPQ------GSILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDT 738
Query: 347 AYFSSSNVPSAAILRMQRLLDLLPQWLDRWRVAVNVGKTAAILF 478
S S AI Q L++ +W +W +A+N KT ILF
Sbjct: 739 IILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILF 782
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 61.7 bits (143), Expect = 1e-09
Identities = 52/164 (31%), Positives = 79/164 (48%), Gaps = 15/164 (9%)
Frame = +2
Query: 32 AAVFLDIEKAFERVWHAGLIHKLVQNT-----DLQHAYV--RTAGVVPGGKILL*RGXXR 190
+A FLDI +AF+RVWH GL++KL + DL Y+ RT V G+ G R
Sbjct: 627 SATFLDITEAFDRVWHDGLLYKLSRLIPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIR 686
Query: 191 XVVGAPSHGRSSSGKRPGSIPHALYTNDIP-----TLEGNLQAWE---VDVKLALFADDS 346
G P G G + +++Y++D+P N+ + ++ LA +ADD+
Sbjct: 687 --AGVPQ------GSILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDT 738
Query: 347 AYFSSSNVPSAAILRMQRLLDLLPQWLDRWRVAVNVGKTAAILF 478
S S AI Q L++ +W +W +A+N KT ILF
Sbjct: 739 IILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILF 782
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 57.2 bits (132), Expect = 2e-08
Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 1/154 (0%)
Frame = +2
Query: 20 RQYTAAVFLDIEKAFERVWHAGLIHKL-VQNTDLQHAYVRTAGVVPGGKILL*RGXXRXV 196
R+Y AVFLD+ +AF++VW GL+ K+ + + H +++ + K +
Sbjct: 573 REYCTAVFLDVSQAFDKVWLDGLMFKIKISLPESTHKLLKS--YLYDRKFAVRCNTATST 630
Query: 197 VGAPSHGRSSSGKRPGSIPHALYTNDIPTLEGNLQAWEVDVKLALFADDSAYFSSSNVPS 376
V G G G + +YT DIPT + ++ FADD+A S S P
Sbjct: 631 VHTIEAG-VPQGSVLGPTLYLIYTADIPT--------NSRLTVSTFADDTAILSRSRSPI 681
Query: 377 AAILRMQRLLDLLPQWLDRWRVAVNVGKTAAILF 478
A ++ L + +WL WR+ VN K + F
Sbjct: 682 QATAQLALYLIDIKKWLSDWRIKVNEQKCKHVTF 715
Score = 37.9 bits (84), Expect = 0.016
Identities = 20/38 (52%), Positives = 23/38 (60%)
Frame = +3
Query: 135 ELLGSYLEGRSFFDAVXGAKSSVRPVTAGVPQGSVLAP 248
+LL SYL R F A S+V + AGVPQGSVL P
Sbjct: 609 KLLKSYLYDRKFAVRCNTATSTVHTIEAGVPQGSVLGP 646
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 52.8 bits (121), Expect = 5e-07
Identities = 55/195 (28%), Positives = 89/195 (45%), Gaps = 7/195 (3%)
Frame = +2
Query: 17 ARQYTAAVFLDIEKAFERVWHAGLIHKLVQNTDLQHAYVRTAGVVPGGKILL*RGXXRXV 196
++Q V LDIE AF+ VWH GL+HKL + + +V L R +
Sbjct: 599 SKQSVGLVTLDIEAAFDTVWHDGLLHKL----KMIGTPIYLIKIVQN--FLTHRYFSVNL 652
Query: 197 VGAPSHGRS-SSGKRPGSI--PHA--LYTNDIPTLEGNLQAWEVDVKLALFADDSAYFSS 361
+ S R ++G GS+ P ++T+DIP QA + L+LFADD+A +S+
Sbjct: 653 NSSQSARRILNAGVPQGSVLGPTLFNIFTHDIP------QA--TNCVLSLFADDAAVYSA 704
Query: 362 SNVPSAAILRMQRLLDLLPQWLDRWRVAVNVGKTAAILFGXXXXXXXXXXXXXXXAN--V 535
S MQ L+ L + +W++ +N KT AI F + +
Sbjct: 705 GFSYSEINQSMQSYLNELDIYYKKWKIKINPNKTNAIFFTKRRKPRYLPDRQLRILDSPI 764
Query: 536 EFRSSVRYXGVDIDR 580
++ ++RY G+ D+
Sbjct: 765 QWVDNIRYLGIIFDK 779
Score = 31.1 bits (67), Expect = 1.8
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +3
Query: 135 ELLGSYLEGRSFFDAVXGAKSSVRPVTAGVPQGSVLAP 248
+++ ++L R F + ++S+ R + AGVPQGSVL P
Sbjct: 637 KIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGP 674
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 52.8 bits (121), Expect = 5e-07
Identities = 55/195 (28%), Positives = 89/195 (45%), Gaps = 7/195 (3%)
Frame = +2
Query: 17 ARQYTAAVFLDIEKAFERVWHAGLIHKLVQNTDLQHAYVRTAGVVPGGKILL*RGXXRXV 196
++Q V LDIE AF+ VWH GL+HKL + + +V L R +
Sbjct: 547 SKQSVGLVTLDIEAAFDTVWHDGLLHKL----KMIGTPIYLIKIVQN--FLTHRYFSVNL 600
Query: 197 VGAPSHGRS-SSGKRPGSI--PHA--LYTNDIPTLEGNLQAWEVDVKLALFADDSAYFSS 361
+ S R ++G GS+ P ++T+DIP QA + L+LFADD+A +S+
Sbjct: 601 NSSQSARRILNAGVPQGSVLGPTLFNIFTHDIP------QA--TNCVLSLFADDAAVYSA 652
Query: 362 SNVPSAAILRMQRLLDLLPQWLDRWRVAVNVGKTAAILFGXXXXXXXXXXXXXXXAN--V 535
S MQ L+ L + +W++ +N KT AI F + +
Sbjct: 653 GFSYSEINQSMQSYLNELDIYYKKWKIKINPNKTNAIFFTKRRKPRYLPDRQLRILDSPI 712
Query: 536 EFRSSVRYXGVDIDR 580
++ ++RY G+ D+
Sbjct: 713 QWVDNIRYLGIIFDK 727
Score = 31.1 bits (67), Expect = 1.8
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +3
Query: 135 ELLGSYLEGRSFFDAVXGAKSSVRPVTAGVPQGSVLAP 248
+++ ++L R F + ++S+ R + AGVPQGSVL P
Sbjct: 585 KIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGP 622
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 52.8 bits (121), Expect = 5e-07
Identities = 41/155 (26%), Positives = 65/155 (41%)
Frame = +2
Query: 14 NARQYTAAVFLDIEKAFERVWHAGLIHKLVQNTDLQHAYVRTAGVVPGGKILL*RGXXRX 193
++++Y ++FLDI +AF+RVWH GL K+ Q L Y G+ R
Sbjct: 573 DSKEYCNSLFLDIREAFDRVWHIGLQLKIKQT--LPAPYFGLLKSYLEGRRFAVRFHSAI 630
Query: 194 VVGAPSHGRSSSGKRPGSIPHALYTNDIPTLEGNLQAWEVDVKLALFADDSAYFSSSNVP 373
G G + + LY++D+P + +L + LA FADD S
Sbjct: 631 STEHNVAAGVPQGSVLGPLLYCLYSHDMPQPDVSLYGKSM---LATFADDVCVTYRSRCE 687
Query: 374 SAAILRMQRLLDLLPQWLDRWRVAVNVGKTAAILF 478
A +Q +W RW + +N K+ + F
Sbjct: 688 HDAADGIQDFAYRFSEWARRWNIGINSSKSNNVCF 722
Score = 40.7 bits (91), Expect = 0.002
Identities = 22/37 (59%), Positives = 23/37 (62%)
Frame = +3
Query: 138 LLGSYLEGRSFFDAVXGAKSSVRPVTAGVPQGSVLAP 248
LL SYLEGR F A S+ V AGVPQGSVL P
Sbjct: 612 LLKSYLEGRRFAVRFHSAISTEHNVAAGVPQGSVLGP 648
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 45.2 bits (102), Expect = 1e-04
Identities = 37/125 (29%), Positives = 57/125 (45%)
Frame = +2
Query: 20 RQYTAAVFLDIEKAFERVWHAGLIHKLVQNTDLQHAYVRTAGVVPGGKILL*RGXXRXVV 199
R+Y A+FLD+ +AF+RVW GL+ K++Q Q+ + + ++ R
Sbjct: 112 REYCTALFLDVAQAFDRVWLDGLMFKIIQLLP-QNIHKLLKSYL-DKRVFAVRCSSSTSS 169
Query: 200 GAPSHGRSSSGKRPGSIPHALYTNDIPTLEGNLQAWEVDVKLALFADDSAYFSSSNVPSA 379
G G I + LYT DIPT N Q + + FADD+A S S P
Sbjct: 170 DFTIEAGVPQGSVLGPILYTLYTADIPT---NYQ-----LTIFTFADDTAIISRSRCPVK 221
Query: 380 AILRM 394
+++
Sbjct: 222 TTMQL 226
Score = 35.1 bits (77), Expect = 0.11
Identities = 19/38 (50%), Positives = 23/38 (60%)
Frame = +3
Query: 135 ELLGSYLEGRSFFDAVXGAKSSVRPVTAGVPQGSVLAP 248
+LL SYL+ R F + SS + AGVPQGSVL P
Sbjct: 148 KLLKSYLDKRVFAVRCSSSTSSDFTIEAGVPQGSVLGP 185
>BT023498-1|AAY84898.1| 1190|Drosophila melanogaster LD32453p
protein.
Length = 1190
Score = 30.7 bits (66), Expect = 2.4
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +2
Query: 5 DRSNARQYTAAVFLDIEKAFERVWHAGLIHKLVQNTDLQH--AYVRTAG 145
DR NA +Y + D E F+R GL+ KL Q D+Q+ A V+TAG
Sbjct: 508 DRCNASRYDLQ-YQDPEPNFDRRKVRGLVGKLFQVKDMQNSMALVQTAG 555
>AY069344-1|AAL39489.2| 985|Drosophila melanogaster LD05471p
protein.
Length = 985
Score = 30.7 bits (66), Expect = 2.4
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +2
Query: 5 DRSNARQYTAAVFLDIEKAFERVWHAGLIHKLVQNTDLQH--AYVRTAG 145
DR NA +Y + D E F+R GL+ KL Q D+Q+ A V+TAG
Sbjct: 303 DRCNASRYDLQ-YQDPEPNFDRRKVRGLVGKLFQVKDMQNSMALVQTAG 350
>AF179287-1|AAD52673.1| 1179|Drosophila melanogaster SMC2 protein.
Length = 1179
Score = 30.7 bits (66), Expect = 2.4
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +2
Query: 5 DRSNARQYTAAVFLDIEKAFERVWHAGLIHKLVQNTDLQH--AYVRTAG 145
DR NA +Y + D E F+R GL+ KL Q D+Q+ A V+TAG
Sbjct: 497 DRCNASRYDLQ-YQDPEPNFDRRKVRGLVGKLFQVKDMQNSMALVQTAG 544
>AE013599-1965|AAF58197.1| 1179|Drosophila melanogaster CG10212-PA
protein.
Length = 1179
Score = 30.7 bits (66), Expect = 2.4
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +2
Query: 5 DRSNARQYTAAVFLDIEKAFERVWHAGLIHKLVQNTDLQH--AYVRTAG 145
DR NA +Y + D E F+R GL+ KL Q D+Q+ A V+TAG
Sbjct: 497 DRCNASRYDLQ-YQDPEPNFDRRKVRGLVGKLFQVKDMQNSMALVQTAG 544
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 28.7 bits (61), Expect = 9.7
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +3
Query: 138 LLGSYLEGRSFFDAVXGAKSSVRPVTAGVPQGSVLAP 248
++G+Y R + S V+AGVPQGSVL P
Sbjct: 586 VIGNYFRDRVLWYVTEDGPRS-HQVSAGVPQGSVLGP 621
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,851,316
Number of Sequences: 53049
Number of extensions: 767479
Number of successful extensions: 2436
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2426
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3716337612
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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