Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0209.Seq
         (797 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   2.8  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   2.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.8  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   3.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   3.7  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   8.6  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   8.6  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   8.6  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   8.6  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -2

Query: 220 GVWDFETHFKFHI 182
           G W F  HF FHI
Sbjct: 665 GYWLFHCHFLFHI 677


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -2

Query: 220 GVWDFETHFKFHI 182
           G W F  HF FHI
Sbjct: 665 GFWLFHCHFLFHI 677


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -1

Query: 338 LQNVAALMCAA*TPPHVAISWLCTHSPRCHLTRHEFFT 225
           L  + ++M A     ++A  W+CT   RC  +  EF T
Sbjct: 716 LFKITSVMIAVSGLVYIATVWICTLMNRCKFS--EFMT 751


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 12/39 (30%), Positives = 14/39 (35%)
 Frame = +3

Query: 6   NHSMMTQQPQYSMSPTPYNQTSFNGNITQQQRDPNYPVP 122
           N   ++Q P   M   PY   S         R P YP P
Sbjct: 130 NGDPLSQPPPAHMGIPPYQLDSKTAGSMGLTRPPMYPFP 168



 Score = 21.4 bits (43), Expect = 8.6
 Identities = 8/26 (30%), Positives = 18/26 (69%)
 Frame = -1

Query: 395 STFLLPLRQITSMHLAMCTLQNVAAL 318
           + F+L ++++ +  +A CTL+  AA+
Sbjct: 484 NAFMLYMKEMRAKVVAECTLKESAAI 509


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 12/39 (30%), Positives = 14/39 (35%)
 Frame = +3

Query: 6   NHSMMTQQPQYSMSPTPYNQTSFNGNITQQQRDPNYPVP 122
           N   ++Q P   M   PY   S         R P YP P
Sbjct: 22  NGDPLSQPPPAHMGIPPYQLDSKTAGSMGLTRPPMYPFP 60



 Score = 21.4 bits (43), Expect = 8.6
 Identities = 8/26 (30%), Positives = 18/26 (69%)
 Frame = -1

Query: 395 STFLLPLRQITSMHLAMCTLQNVAAL 318
           + F+L ++++ +  +A CTL+  AA+
Sbjct: 376 NAFMLYMKEMRAKVVAECTLKESAAI 401


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 704 RNVCSMPLKTVXKIVGPQ 757
           RN C+ PL  +  I GP+
Sbjct: 270 RNDCAKPLTQIRNIRGPR 287


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -2

Query: 220 GVWDFETHFKFHI 182
           G W F  H +FH+
Sbjct: 598 GYWLFHCHIEFHV 610


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 704 RNVCSMPLKTVXKIVGP 754
           RN C+ PL  +  I GP
Sbjct: 270 RNDCAKPLTQIRNIPGP 286


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 704 RNVCSMPLKTVXKIVGP 754
           RN C+ PL  +  I GP
Sbjct: 270 RNDCAKPLTQIRNIPGP 286


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,742
Number of Sequences: 336
Number of extensions: 3886
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)