Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0209.Seq
         (797 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0610 - 23636097-23638958                                         32   0.61 
04_03_1026 - 21806124-21806225,21807017-21807055,21807307-218074...    29   3.2  
09_06_0347 + 22445962-22446154,22446495-22446616,22446764-224468...    28   9.9  
02_04_0039 - 19118632-19118820,19119018-19119395,19120151-191203...    28   9.9  

>01_05_0610 - 23636097-23638958
          Length = 953

 Score = 31.9 bits (69), Expect = 0.61
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = -1

Query: 473 EEHSADLRAGSRLSRETGAHIVLSIDSTFLLPLRQITSMHLAMCTL 336
           E H + L +   L      HI + ++ST++ P +QIT + L  C L
Sbjct: 410 EGHLSGLESLDLLILSDNNHIAIKVNSTWVPPFKQITDIELRSCQL 455


>04_03_1026 -
           21806124-21806225,21807017-21807055,21807307-21807407,
           21807924-21808185,21808334-21808458,21809058-21809637
          Length = 402

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -3

Query: 420 CSHSTLHRFNIS-IAIETNNFNAFSDVYSSECCGAN 316
           CS   L R+  + IAI TN  N  S  Y+S C G++
Sbjct: 350 CSDPVLKRYKYNHIAIATNKRNCLSCSYTSNCTGSS 385


>09_06_0347 +
           22445962-22446154,22446495-22446616,22446764-22446885,
           22447405-22447594,22447874-22448014,22448257-22448724,
           22448842-22449609,22450185-22450373
          Length = 730

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = -3

Query: 456 SAGRLAAIT*NWC-SHSTLHRFNISIAIETNNFNAFSD 346
           S  R ++++  WC S++ LH+ N+   IET + + +SD
Sbjct: 169 SVERSSSLSEIWCVSNTWLHKLNLEPHIETTSSDRYSD 206


>02_04_0039 -
           19118632-19118820,19119018-19119395,19120151-19120345,
           19120425-19120502,19120567-19120752,19120828-19121058,
           19121137-19121490,19121588-19121785,19121869-19122039,
           19122156-19122263,19122362-19122580,19122665-19122871,
           19122978-19123196,19123315-19123389,19123749-19123901
          Length = 986

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +3

Query: 585 HRNYDNYVQHYTDKXTLLAXKANELLIVCQNNKRIPRXGEEMFA 716
           H   ++ V H TD  T+ A KA + L   Q N+R     E +F+
Sbjct: 553 HSAKESPVMHITDLTTVSAKKARDFLPFLQRNRRHSAIVEYVFS 596


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,454,211
Number of Sequences: 37544
Number of extensions: 427838
Number of successful extensions: 1123
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1123
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)