Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0209.Seq
(797 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC039257-1|AAH39257.1| 1391|Homo sapiens nucleoporin 155kDa prot... 100 5e-21
AJ007558-1|CAA07553.1| 1391|Homo sapiens nucleoporin 155 protein. 100 5e-21
AF165926-1|AAD52966.1| 1332|Homo sapiens NUP155 protein. 100 5e-21
AB018334-1|BAA34511.2| 1357|Homo sapiens KIAA0791 protein protein. 100 5e-21
AK074718-1|BAC11159.1| 458|Homo sapiens protein ( Homo sapiens ... 31 6.4
>BC039257-1|AAH39257.1| 1391|Homo sapiens nucleoporin 155kDa protein.
Length = 1391
Score = 100 bits (240), Expect = 5e-21
Identities = 51/140 (36%), Positives = 80/140 (57%)
Frame = +2
Query: 287 QRVAAFMQRTLAPQHSEEYTSLNALKLFVSMAIEMLNLWRVLCEHQFHVIAASLPADQQN 466
Q++ +QR E SL A++ V + + L LW++LCEHQF +I A L + Q
Sbjct: 757 QQMQQELQRKFHEAQLSEKISLQAIQQLVRKSYQALALWKLLCEHQFTIIVAELQKELQE 816
Query: 467 ALQAASFRELLVGRQEVACLLLGSLVAGYLRDNASVDGISQKLRQLCPTLYRQXDATCXQ 646
L+ +F++L++ +E+ L+ SL+ Y+RDNA+VDGIS L+ +CP LY DA C +
Sbjct: 817 QLKITTFKDLVIRDKELTGALIASLINCYIRDNAAVDGISLHLQDICPLLYSTDDAICSK 876
Query: 647 GQRTLDCLPKQQKNPTXRGR 706
L +Q +N T + R
Sbjct: 877 ANELLQ-RSRQVQNKTEKER 895
Score = 31.1 bits (67), Expect = 4.8
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 123 IEFSAKHNGLYIYVGRILLPIWNLKCV 203
I +S KHNG+ IY RI+ IW+ V
Sbjct: 657 IVYSGKHNGICIYFSRIMGNIWDASLV 683
>AJ007558-1|CAA07553.1| 1391|Homo sapiens nucleoporin 155 protein.
Length = 1391
Score = 100 bits (240), Expect = 5e-21
Identities = 51/140 (36%), Positives = 80/140 (57%)
Frame = +2
Query: 287 QRVAAFMQRTLAPQHSEEYTSLNALKLFVSMAIEMLNLWRVLCEHQFHVIAASLPADQQN 466
Q++ +QR E SL A++ V + + L LW++LCEHQF +I A L + Q
Sbjct: 757 QQMQQELQRKFHEAQLSEKISLQAIQQLVRKSYQALALWKLLCEHQFTIIVAELQKELQE 816
Query: 467 ALQAASFRELLVGRQEVACLLLGSLVAGYLRDNASVDGISQKLRQLCPTLYRQXDATCXQ 646
L+ +F++L++ +E+ L+ SL+ Y+RDNA+VDGIS L+ +CP LY DA C +
Sbjct: 817 QLKITTFKDLVIRDKELTGALIASLINCYIRDNAAVDGISLHLQDICPLLYSTDDAICSK 876
Query: 647 GQRTLDCLPKQQKNPTXRGR 706
L +Q +N T + R
Sbjct: 877 ANELLQ-RSRQVQNKTEKER 895
Score = 31.1 bits (67), Expect = 4.8
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 123 IEFSAKHNGLYIYVGRILLPIWNLKCV 203
I +S KHNG+ IY RI+ IW+ V
Sbjct: 657 IVYSGKHNGICIYFSRIMGNIWDASLV 683
>AF165926-1|AAD52966.1| 1332|Homo sapiens NUP155 protein.
Length = 1332
Score = 100 bits (240), Expect = 5e-21
Identities = 51/140 (36%), Positives = 80/140 (57%)
Frame = +2
Query: 287 QRVAAFMQRTLAPQHSEEYTSLNALKLFVSMAIEMLNLWRVLCEHQFHVIAASLPADQQN 466
Q++ +QR E SL A++ V + + L LW++LCEHQF +I A L + Q
Sbjct: 698 QQMQQELQRKFHEAQLSEKISLQAIQQLVRKSYQALALWKLLCEHQFTIIVAELQKELQE 757
Query: 467 ALQAASFRELLVGRQEVACLLLGSLVAGYLRDNASVDGISQKLRQLCPTLYRQXDATCXQ 646
L+ +F++L++ +E+ L+ SL+ Y+RDNA+VDGIS L+ +CP LY DA C +
Sbjct: 758 QLKITTFKDLVIRDKELTGALIASLINCYIRDNAAVDGISLHLQDICPLLYSTDDAICSK 817
Query: 647 GQRTLDCLPKQQKNPTXRGR 706
L +Q +N T + R
Sbjct: 818 ANELLQ-RSRQVQNKTEKER 836
Score = 31.1 bits (67), Expect = 4.8
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 123 IEFSAKHNGLYIYVGRILLPIWNLKCV 203
I +S KHNG+ IY RI+ IW+ V
Sbjct: 598 IVYSGKHNGICIYFSRIMGNIWDASLV 624
>AB018334-1|BAA34511.2| 1357|Homo sapiens KIAA0791 protein protein.
Length = 1357
Score = 100 bits (240), Expect = 5e-21
Identities = 51/140 (36%), Positives = 80/140 (57%)
Frame = +2
Query: 287 QRVAAFMQRTLAPQHSEEYTSLNALKLFVSMAIEMLNLWRVLCEHQFHVIAASLPADQQN 466
Q++ +QR E SL A++ V + + L LW++LCEHQF +I A L + Q
Sbjct: 723 QQMQQELQRKFHEAQLSEKISLQAIQQLVRKSYQALALWKLLCEHQFTIIVAELQKELQE 782
Query: 467 ALQAASFRELLVGRQEVACLLLGSLVAGYLRDNASVDGISQKLRQLCPTLYRQXDATCXQ 646
L+ +F++L++ +E+ L+ SL+ Y+RDNA+VDGIS L+ +CP LY DA C +
Sbjct: 783 QLKITTFKDLVIRDKELTGALIASLINCYIRDNAAVDGISLHLQDICPLLYSTDDAICSK 842
Query: 647 GQRTLDCLPKQQKNPTXRGR 706
L +Q +N T + R
Sbjct: 843 ANELLQ-RSRQVQNKTEKER 861
Score = 31.1 bits (67), Expect = 4.8
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 123 IEFSAKHNGLYIYVGRILLPIWNLKCV 203
I +S KHNG+ IY RI+ IW+ V
Sbjct: 623 IVYSGKHNGICIYFSRIMGNIWDASLV 649
>AK074718-1|BAC11159.1| 458|Homo sapiens protein ( Homo sapiens
cDNA FLJ90237 fis, clone NT2RM2000622. ).
Length = 458
Score = 30.7 bits (66), Expect = 6.4
Identities = 20/90 (22%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Frame = -3
Query: 549 PATKDPRSK--HATSCRPTSNSLKLAA*RAFC*SAGRLAAIT*NWCSHSTLHRFNISIAI 376
P D RSK + R ++ A+ R L+ + ++C+H T N+ A+
Sbjct: 325 PGQMDNRSKLRNIVELRLAGLDIRDASLRLIIRHMPLLSKLHLSYCNHVTDQSINLLTAV 384
Query: 375 ETNNFNAFSDVYSSECCGANVRCMNAATRC 286
T ++ +++ S+C +C++ RC
Sbjct: 385 GTTTRDSLTEINLSDCNKVTDQCLSFFKRC 414
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,941,161
Number of Sequences: 237096
Number of extensions: 2375074
Number of successful extensions: 10220
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10220
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9813323168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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