Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0209.Seq
(797 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y17111-1|CAA76635.1| 1365|Drosophila melanogaster Nup154 protein. 94 2e-19
AF160944-1|AAD46884.1| 1365|Drosophila melanogaster Nup154 protein. 94 2e-19
AF051398-1|AAC05386.1| 1365|Drosophila melanogaster nucleoporin ... 94 2e-19
AF051397-1|AAC05385.1| 1349|Drosophila melanogaster nucleoporin ... 94 2e-19
AF051396-2|AAC06248.1| 1349|Drosophila melanogaster nucleoporin ... 94 2e-19
AF051396-1|AAC06247.1| 1365|Drosophila melanogaster nucleoporin ... 94 2e-19
AE014134-2012|AAF53050.2| 1123|Drosophila melanogaster CG4579-PB... 94 2e-19
AE014134-2011|AAF53051.1| 1365|Drosophila melanogaster CG4579-PA... 94 2e-19
AE014297-4435|AAZ83991.1| 722|Drosophila melanogaster CG33956-P... 32 0.79
BT016035-1|AAV36920.1| 405|Drosophila melanogaster RE01104p pro... 31 1.8
AY113319-1|AAM29324.1| 270|Drosophila melanogaster AT28212p pro... 31 1.8
AE014297-1026|AAF54440.1| 421|Drosophila melanogaster CG9475-PA... 31 1.8
AE014297-1025|AAN13443.2| 389|Drosophila melanogaster CG9475-PB... 31 1.8
X17298-1|CAA35185.1| 1129|Drosophila melanogaster RNA polymerase... 29 7.4
AY075569-1|AAL68376.1| 1129|Drosophila melanogaster SD02110p pro... 29 9.7
AE014134-97|AAF51503.1| 1129|Drosophila melanogaster CG4033-PA p... 29 9.7
>Y17111-1|CAA76635.1| 1365|Drosophila melanogaster Nup154 protein.
Length = 1365
Score = 94.3 bits (224), Expect = 2e-19
Identities = 48/109 (44%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
Frame = +2
Query: 308 QRTLAPQHS-EEYTSLNALKLFVSMAIEMLNLWRVLCEHQFHVIAASLPADQQNALQAAS 484
QR L+ Q EE SL+AL LFV A E+++LW +L H F +I L + Q L ++
Sbjct: 745 QRVLSEQAQVEETRSLSALNLFVKHACEVISLWNILNSHSFQLICVQLSPEHQKLLTCST 804
Query: 485 FRELLVGRQEVACLLLGSLVAGYLRDNASVDGISQKLRQLCPTLYRQXD 631
FR+LL+ R EV L+ SL+ YL+D A V +S+ LR+ CP LYR D
Sbjct: 805 FRDLLITRSEVCAFLIISLINLYLKDAAGVSEVSKNLRENCPNLYRHED 853
Score = 46.8 bits (106), Expect = 3e-05
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Frame = +3
Query: 15 MMTQQPQ-YSMSPTPYNQTSFN------GNITQQQ-RDPNYPVPIEFSAKHNGLYIYVGR 170
M T P + SP + + FN GN+ Q N PI FSAKH+GLY+YV R
Sbjct: 607 MSTPMPNSVANSPVGFPGSQFNQPISPIGNMQPPQVAVSNENSPIVFSAKHDGLYMYVSR 666
Query: 171 ILLPIWNLKCVSK 209
+L +W ++CV++
Sbjct: 667 MLHSVWQMRCVNE 679
>AF160944-1|AAD46884.1| 1365|Drosophila melanogaster Nup154 protein.
Length = 1365
Score = 94.3 bits (224), Expect = 2e-19
Identities = 48/109 (44%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
Frame = +2
Query: 308 QRTLAPQHS-EEYTSLNALKLFVSMAIEMLNLWRVLCEHQFHVIAASLPADQQNALQAAS 484
QR L+ Q EE SL+AL LFV A E+++LW +L H F +I L + Q L ++
Sbjct: 745 QRVLSEQAQVEETRSLSALNLFVKHACEVISLWNILNSHSFQLICVQLSPEHQKLLTCST 804
Query: 485 FRELLVGRQEVACLLLGSLVAGYLRDNASVDGISQKLRQLCPTLYRQXD 631
FR+LL+ R EV L+ SL+ YL+D A V +S+ LR+ CP LYR D
Sbjct: 805 FRDLLITRSEVCAFLIISLINLYLKDAAGVSEVSKNLRENCPNLYRHED 853
Score = 46.8 bits (106), Expect = 3e-05
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Frame = +3
Query: 15 MMTQQPQ-YSMSPTPYNQTSFN------GNITQQQ-RDPNYPVPIEFSAKHNGLYIYVGR 170
M T P + SP + + FN GN+ Q N PI FSAKH+GLY+YV R
Sbjct: 607 MSTPMPNSVANSPVGFPGSQFNQPISPIGNMQPPQVAVSNENSPIVFSAKHDGLYMYVSR 666
Query: 171 ILLPIWNLKCVSK 209
+L +W ++CV++
Sbjct: 667 MLHSVWQMRCVNE 679
>AF051398-1|AAC05386.1| 1365|Drosophila melanogaster nucleoporin
protein.
Length = 1365
Score = 94.3 bits (224), Expect = 2e-19
Identities = 48/109 (44%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
Frame = +2
Query: 308 QRTLAPQHS-EEYTSLNALKLFVSMAIEMLNLWRVLCEHQFHVIAASLPADQQNALQAAS 484
QR L+ Q EE SL+AL LFV A E+++LW +L H F +I L + Q L ++
Sbjct: 745 QRVLSEQAQVEETRSLSALNLFVKHACEVISLWNILNSHSFQLICVQLSPEHQKLLTCST 804
Query: 485 FRELLVGRQEVACLLLGSLVAGYLRDNASVDGISQKLRQLCPTLYRQXD 631
FR+LL+ R EV L+ SL+ YL+D A V +S+ LR+ CP LYR D
Sbjct: 805 FRDLLITRSEVCAFLIISLINLYLKDAAGVSEVSKNLRENCPNLYRHED 853
Score = 46.8 bits (106), Expect = 3e-05
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Frame = +3
Query: 15 MMTQQPQ-YSMSPTPYNQTSFN------GNITQQQ-RDPNYPVPIEFSAKHNGLYIYVGR 170
M T P + SP + + FN GN+ Q N PI FSAKH+GLY+YV R
Sbjct: 607 MSTPMPNSVANSPVGFPGSQFNQPISPIGNMQPPQVAVSNENSPIVFSAKHDGLYMYVSR 666
Query: 171 ILLPIWNLKCVSK 209
+L +W ++CV++
Sbjct: 667 MLHSVWQMRCVNE 679
>AF051397-1|AAC05385.1| 1349|Drosophila melanogaster nucleoporin
protein.
Length = 1349
Score = 94.3 bits (224), Expect = 2e-19
Identities = 48/109 (44%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
Frame = +2
Query: 308 QRTLAPQHS-EEYTSLNALKLFVSMAIEMLNLWRVLCEHQFHVIAASLPADQQNALQAAS 484
QR L+ Q EE SL+AL LFV A E+++LW +L H F +I L + Q L ++
Sbjct: 729 QRVLSEQAQVEETRSLSALNLFVKHACEVISLWNILNSHSFQLICVQLSPEHQKLLTCST 788
Query: 485 FRELLVGRQEVACLLLGSLVAGYLRDNASVDGISQKLRQLCPTLYRQXD 631
FR+LL+ R EV L+ SL+ YL+D A V +S+ LR+ CP LYR D
Sbjct: 789 FRDLLITRSEVCAFLIISLINLYLKDAAGVSEVSKNLRENCPNLYRHED 837
Score = 46.8 bits (106), Expect = 3e-05
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Frame = +3
Query: 15 MMTQQPQ-YSMSPTPYNQTSFN------GNITQQQ-RDPNYPVPIEFSAKHNGLYIYVGR 170
M T P + SP + + FN GN+ Q N PI FSAKH+GLY+YV R
Sbjct: 591 MSTPMPNSVANSPVGFPGSQFNQPISPIGNMQPPQVAVSNENSPIVFSAKHDGLYMYVSR 650
Query: 171 ILLPIWNLKCVSK 209
+L +W ++CV++
Sbjct: 651 MLHSVWQMRCVNE 663
>AF051396-2|AAC06248.1| 1349|Drosophila melanogaster nucleoporin
protein.
Length = 1349
Score = 94.3 bits (224), Expect = 2e-19
Identities = 48/109 (44%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
Frame = +2
Query: 308 QRTLAPQHS-EEYTSLNALKLFVSMAIEMLNLWRVLCEHQFHVIAASLPADQQNALQAAS 484
QR L+ Q EE SL+AL LFV A E+++LW +L H F +I L + Q L ++
Sbjct: 729 QRVLSEQAQVEETRSLSALNLFVKHACEVISLWNILNSHSFQLICVQLSPEHQKLLTCST 788
Query: 485 FRELLVGRQEVACLLLGSLVAGYLRDNASVDGISQKLRQLCPTLYRQXD 631
FR+LL+ R EV L+ SL+ YL+D A V +S+ LR+ CP LYR D
Sbjct: 789 FRDLLITRSEVCAFLIISLINLYLKDAAGVSEVSKNLRENCPNLYRHED 837
Score = 46.8 bits (106), Expect = 3e-05
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Frame = +3
Query: 15 MMTQQPQ-YSMSPTPYNQTSFN------GNITQQQ-RDPNYPVPIEFSAKHNGLYIYVGR 170
M T P + SP + + FN GN+ Q N PI FSAKH+GLY+YV R
Sbjct: 591 MSTPMPNSVANSPVGFPGSQFNQPISPIGNMQPPQVAVSNENSPIVFSAKHDGLYMYVSR 650
Query: 171 ILLPIWNLKCVSK 209
+L +W ++CV++
Sbjct: 651 MLHSVWQMRCVNE 663
>AF051396-1|AAC06247.1| 1365|Drosophila melanogaster nucleoporin
protein.
Length = 1365
Score = 94.3 bits (224), Expect = 2e-19
Identities = 48/109 (44%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
Frame = +2
Query: 308 QRTLAPQHS-EEYTSLNALKLFVSMAIEMLNLWRVLCEHQFHVIAASLPADQQNALQAAS 484
QR L+ Q EE SL+AL LFV A E+++LW +L H F +I L + Q L ++
Sbjct: 745 QRVLSEQAQVEETRSLSALNLFVKHACEVISLWNILNSHSFQLICVQLSPEHQKLLTCST 804
Query: 485 FRELLVGRQEVACLLLGSLVAGYLRDNASVDGISQKLRQLCPTLYRQXD 631
FR+LL+ R EV L+ SL+ YL+D A V +S+ LR+ CP LYR D
Sbjct: 805 FRDLLITRSEVCAFLIISLINLYLKDAAGVSEVSKNLRENCPNLYRHED 853
Score = 46.8 bits (106), Expect = 3e-05
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Frame = +3
Query: 15 MMTQQPQ-YSMSPTPYNQTSFN------GNITQQQ-RDPNYPVPIEFSAKHNGLYIYVGR 170
M T P + SP + + FN GN+ Q N PI FSAKH+GLY+YV R
Sbjct: 607 MSTPMPNSVANSPVGFPGSQFNQPISPIGNMQPPQVAVSNENSPIVFSAKHDGLYMYVSR 666
Query: 171 ILLPIWNLKCVSK 209
+L +W ++CV++
Sbjct: 667 MLHSVWQMRCVNE 679
>AE014134-2012|AAF53050.2| 1123|Drosophila melanogaster CG4579-PB,
isoform B protein.
Length = 1123
Score = 94.3 bits (224), Expect = 2e-19
Identities = 48/109 (44%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
Frame = +2
Query: 308 QRTLAPQHS-EEYTSLNALKLFVSMAIEMLNLWRVLCEHQFHVIAASLPADQQNALQAAS 484
QR L+ Q EE SL+AL LFV A E+++LW +L H F +I L + Q L ++
Sbjct: 503 QRVLSEQAQVEETRSLSALNLFVKHACEVISLWNILNSHSFQLICVQLSPEHQKLLTCST 562
Query: 485 FRELLVGRQEVACLLLGSLVAGYLRDNASVDGISQKLRQLCPTLYRQXD 631
FR+LL+ R EV L+ SL+ YL+D A V +S+ LR+ CP LYR D
Sbjct: 563 FRDLLITRSEVCAFLIISLINLYLKDAAGVSEVSKNLRENCPNLYRHED 611
Score = 46.8 bits (106), Expect = 3e-05
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Frame = +3
Query: 15 MMTQQPQ-YSMSPTPYNQTSFN------GNITQQQ-RDPNYPVPIEFSAKHNGLYIYVGR 170
M T P + SP + + FN GN+ Q N PI FSAKH+GLY+YV R
Sbjct: 365 MSTPMPNSVANSPVGFPGSQFNQPISPIGNMQPPQVAVSNENSPIVFSAKHDGLYMYVSR 424
Query: 171 ILLPIWNLKCVSK 209
+L +W ++CV++
Sbjct: 425 MLHSVWQMRCVNE 437
>AE014134-2011|AAF53051.1| 1365|Drosophila melanogaster CG4579-PA,
isoform A protein.
Length = 1365
Score = 94.3 bits (224), Expect = 2e-19
Identities = 48/109 (44%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
Frame = +2
Query: 308 QRTLAPQHS-EEYTSLNALKLFVSMAIEMLNLWRVLCEHQFHVIAASLPADQQNALQAAS 484
QR L+ Q EE SL+AL LFV A E+++LW +L H F +I L + Q L ++
Sbjct: 745 QRVLSEQAQVEETRSLSALNLFVKHACEVISLWNILNSHSFQLICVQLSPEHQKLLTCST 804
Query: 485 FRELLVGRQEVACLLLGSLVAGYLRDNASVDGISQKLRQLCPTLYRQXD 631
FR+LL+ R EV L+ SL+ YL+D A V +S+ LR+ CP LYR D
Sbjct: 805 FRDLLITRSEVCAFLIISLINLYLKDAAGVSEVSKNLRENCPNLYRHED 853
Score = 46.8 bits (106), Expect = 3e-05
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Frame = +3
Query: 15 MMTQQPQ-YSMSPTPYNQTSFN------GNITQQQ-RDPNYPVPIEFSAKHNGLYIYVGR 170
M T P + SP + + FN GN+ Q N PI FSAKH+GLY+YV R
Sbjct: 607 MSTPMPNSVANSPVGFPGSQFNQPISPIGNMQPPQVAVSNENSPIVFSAKHDGLYMYVSR 666
Query: 171 ILLPIWNLKCVSK 209
+L +W ++CV++
Sbjct: 667 MLHSVWQMRCVNE 679
>AE014297-4435|AAZ83991.1| 722|Drosophila melanogaster CG33956-PD,
isoform D protein.
Length = 722
Score = 32.3 bits (70), Expect = 0.79
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +3
Query: 9 HSMMTQQPQYSMSPTPYNQTSFNGNITQQQRDPNYPVPIEFSAKHNGLY 155
+ +TQQPQ T Y Q ++N N TQQQ+ + VP S ++ Y
Sbjct: 98 NQQLTQQPQQQQQQTQYMQHNYN-NYTQQQQQ-QHLVPATTSQSNSHFY 144
>BT016035-1|AAV36920.1| 405|Drosophila melanogaster RE01104p
protein.
Length = 405
Score = 31.1 bits (67), Expect = 1.8
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -1
Query: 590 SVKFHRQKHCHADILPPKI-LEVSMLLPADQPVI 492
SV H+Q +C D++PP+ +SML P ++P I
Sbjct: 116 SVGLHKQSNCLVDLVPPEADSTISMLSPDEKPDI 149
>AY113319-1|AAM29324.1| 270|Drosophila melanogaster AT28212p
protein.
Length = 270
Score = 31.1 bits (67), Expect = 1.8
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -1
Query: 590 SVKFHRQKHCHADILPPKI-LEVSMLLPADQPVI 492
SV H+Q +C D++PP+ +SML P ++P I
Sbjct: 69 SVGLHKQSNCLVDLVPPEADSTISMLSPDEKPDI 102
>AE014297-1026|AAF54440.1| 421|Drosophila melanogaster CG9475-PA,
isoform A protein.
Length = 421
Score = 31.1 bits (67), Expect = 1.8
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -1
Query: 590 SVKFHRQKHCHADILPPKI-LEVSMLLPADQPVI 492
SV H+Q +C D++PP+ +SML P ++P I
Sbjct: 116 SVGLHKQSNCLVDLVPPEADSTISMLSPDEKPDI 149
>AE014297-1025|AAN13443.2| 389|Drosophila melanogaster CG9475-PB,
isoform B protein.
Length = 389
Score = 31.1 bits (67), Expect = 1.8
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -1
Query: 590 SVKFHRQKHCHADILPPKI-LEVSMLLPADQPVI 492
SV H+Q +C D++PP+ +SML P ++P I
Sbjct: 100 SVGLHKQSNCLVDLVPPEADSTISMLSPDEKPDI 133
>X17298-1|CAA35185.1| 1129|Drosophila melanogaster RNA polymerase 3,
second largestsubunit protein.
Length = 1129
Score = 29.1 bits (62), Expect = 7.4
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = +3
Query: 117 VPIEFSAKHNGLYIYVG--RILLPIWNLK 197
+P + + + GLYI G R++ P+WNLK
Sbjct: 597 IPFKKNGQFPGLYIATGPARLMRPVWNLK 625
>AY075569-1|AAL68376.1| 1129|Drosophila melanogaster SD02110p
protein.
Length = 1129
Score = 28.7 bits (61), Expect = 9.7
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = +3
Query: 117 VPIEFSAKHNGLYIYVG--RILLPIWNLK 197
+P + + + GLYI G R++ P+WNLK
Sbjct: 597 IPFKKNGQFPGLYIATGPARMMRPVWNLK 625
>AE014134-97|AAF51503.1| 1129|Drosophila melanogaster CG4033-PA
protein.
Length = 1129
Score = 28.7 bits (61), Expect = 9.7
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = +3
Query: 117 VPIEFSAKHNGLYIYVG--RILLPIWNLK 197
+P + + + GLYI G R++ P+WNLK
Sbjct: 597 IPFKKNGQFPGLYIATGPARMMRPVWNLK 625
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,679,994
Number of Sequences: 53049
Number of extensions: 764814
Number of successful extensions: 2136
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2136
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3716337612
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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