Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0207.Seq
(485 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88180-1|AAB42294.1| 203|Caenorhabditis elegans Hypothetical pr... 28 3.1
U55366-1|AAA97980.2| 430|Caenorhabditis elegans Suppressor of c... 28 3.1
M98552-4|AAP68923.1| 1353|Caenorhabditis elegans Hypothetical pr... 28 3.1
M98552-3|AAP68922.1| 1342|Caenorhabditis elegans Hypothetical pr... 28 3.1
AF419335-1|AAL15971.1| 430|Caenorhabditis elegans multisubstrat... 28 3.1
AF039038-1|AAK21435.1| 877|Caenorhabditis elegans Hypothetical ... 28 3.1
U50301-2|AAM29675.1| 362|Caenorhabditis elegans Hypothetical pr... 28 4.1
AC006708-5|AAF60428.2| 254|Caenorhabditis elegans Hypothetical ... 28 4.1
AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical... 27 5.5
U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical pr... 27 7.2
AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical ... 27 7.2
AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical ... 27 7.2
AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical... 27 7.2
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 27 7.2
AC006729-6|AAF60464.1| 282|Caenorhabditis elegans Hypothetical ... 27 7.2
AL117204-6|CAB55149.2| 833|Caenorhabditis elegans Hypothetical ... 27 9.5
>U88180-1|AAB42294.1| 203|Caenorhabditis elegans Hypothetical
protein T27A3.4 protein.
Length = 203
Score = 28.3 bits (60), Expect = 3.1
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = -2
Query: 196 LTTASNGSDSSSRGTEYSTT--CRTARRAYSKARMACDTGGKAS 71
++ S G SSSRG+ Y T R+++R+ S++R +G ++S
Sbjct: 104 VSRGSKGRRSSSRGSVYGRTGRSRSSKRSRSRSRPRTRSGSRSS 147
>U55366-1|AAA97980.2| 430|Caenorhabditis elegans Suppressor of clr
protein 1 protein.
Length = 430
Score = 28.3 bits (60), Expect = 3.1
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 246 SHASPFPSDAPLTSMDVERALSFAPRRGTA 335
S SP PSD S+DV+R L+F R A
Sbjct: 397 STRSPTPSDIEYISVDVDRTLAFKQMRRAA 426
>M98552-4|AAP68923.1| 1353|Caenorhabditis elegans Hypothetical protein
ZK370.4b protein.
Length = 1353
Score = 28.3 bits (60), Expect = 3.1
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 305 VELRSASWHRGLQELWR 355
VE R+ASW G+ LWR
Sbjct: 993 VETRAASWFNGMSSLWR 1009
>M98552-3|AAP68922.1| 1342|Caenorhabditis elegans Hypothetical protein
ZK370.4a protein.
Length = 1342
Score = 28.3 bits (60), Expect = 3.1
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 305 VELRSASWHRGLQELWR 355
VE R+ASW G+ LWR
Sbjct: 982 VETRAASWFNGMSSLWR 998
>AF419335-1|AAL15971.1| 430|Caenorhabditis elegans multisubstrate
adaptor proteinSOC-1 protein.
Length = 430
Score = 28.3 bits (60), Expect = 3.1
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 246 SHASPFPSDAPLTSMDVERALSFAPRRGTA 335
S SP PSD S+DV+R L+F R A
Sbjct: 397 STRSPTPSDIEYISVDVDRTLAFKQMRRAA 426
>AF039038-1|AAK21435.1| 877|Caenorhabditis elegans Hypothetical
protein K06A5.4 protein.
Length = 877
Score = 28.3 bits (60), Expect = 3.1
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = -1
Query: 452 NTENEKHRSNSELQY*AASRRHFPTSEPRQRTASRALEDRGATTRSEAQRALY 294
N+ENEK R+ E + R E +QR + A +R E + A Y
Sbjct: 155 NSENEKERNRREREEQQTKERERRLEEEKQRRDAEAEAERRRKEEEELEEANY 207
>U50301-2|AAM29675.1| 362|Caenorhabditis elegans Hypothetical
protein F20D6.5 protein.
Length = 362
Score = 27.9 bits (59), Expect = 4.1
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +2
Query: 230 CDGRLKSRFSVPERRSSDEYGRRARVELRSASWHRGLQELWRLFAVVV 373
C G + E+ Y RA V+ +S +W Q+L RLF +
Sbjct: 232 CHGDYSFHNLLYEKHCDGSYKFRAIVDFQSVNWGNAAQDLSRLFVTAM 279
>AC006708-5|AAF60428.2| 254|Caenorhabditis elegans Hypothetical
protein Y110A7A.11 protein.
Length = 254
Score = 27.9 bits (59), Expect = 4.1
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = -3
Query: 438 KTPFEQRVTILSGQSPTFPNIRTTTANSLQSS*RPRCHDAERSSTRALRPYSSEERRSGT 259
K+ E+R+ ++ FP+++ T A+S + +D E+ S LR RS
Sbjct: 76 KSSAEERLKVIEKIPRVFPDVQVTVADSKNDN-EAESYDFEKESAAGLRATQRSIYRSDL 134
Query: 258 EKR 250
K+
Sbjct: 135 RKQ 137
>AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical
protein Y51H4A.12 protein.
Length = 1677
Score = 27.5 bits (58), Expect = 5.5
Identities = 15/65 (23%), Positives = 29/65 (44%)
Frame = -3
Query: 426 EQRVTILSGQSPTFPNIRTTTANSLQSS*RPRCHDAERSSTRALRPYSSEERRSGTEKRD 247
E+R +L+GQSP F +R + R +A++ + + +E R +K +
Sbjct: 1400 EKRSGLLAGQSPDFSEVRAQIEEENRMKERFTKREAKKKAVEKAKEKEKKEHRKEPKKAN 1459
Query: 246 FKRPS 232
P+
Sbjct: 1460 EPGPA 1464
>U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical protein
F41H10.3b protein.
Length = 1005
Score = 27.1 bits (57), Expect = 7.2
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = -3
Query: 444 KRKTPFEQRVTILSGQSPTFPNIRTTTANSLQSS*RPRCHDAERSSTRALRPY-SSEERR 268
+R P + +L+ + T P ++ NS QS RPR ++ A P ++ +RR
Sbjct: 931 RRWDPLPKSSGVLAHSNSTIPYVQRVPNNSTQSDFRPRSFSQNSVASPAPAPVPNAIKRR 990
Query: 267 SG 262
G
Sbjct: 991 EG 992
>AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical
protein Y47D3B.5b protein.
Length = 1136
Score = 27.1 bits (57), Expect = 7.2
Identities = 17/36 (47%), Positives = 17/36 (47%)
Frame = -3
Query: 303 RALRPYSSEERRSGTEKRDFKRPSQFSFGYGGSLIT 196
RA RPYS E S T R SQFSF L T
Sbjct: 35 RASRPYSRESLLSNTSLGSKVRFSQFSFQSRDDLTT 70
>AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical
protein Y47D3B.5a protein.
Length = 1088
Score = 27.1 bits (57), Expect = 7.2
Identities = 17/36 (47%), Positives = 17/36 (47%)
Frame = -3
Query: 303 RALRPYSSEERRSGTEKRDFKRPSQFSFGYGGSLIT 196
RA RPYS E S T R SQFSF L T
Sbjct: 35 RASRPYSRESLLSNTSLGSKVRFSQFSFQSRDDLTT 70
>AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical
protein F15E6.1 protein.
Length = 1655
Score = 27.1 bits (57), Expect = 7.2
Identities = 14/57 (24%), Positives = 26/57 (45%)
Frame = -3
Query: 426 EQRVTILSGQSPTFPNIRTTTANSLQSS*RPRCHDAERSSTRALRPYSSEERRSGTE 256
E+R +L+GQSP F +R + R R +A++ + + +E + E
Sbjct: 1383 EERSGLLAGQSPDFSEVRAQIEEENRMKERSRKREAKKKAVEKEKKEHRKEPKKTNE 1439
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 27.1 bits (57), Expect = 7.2
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -1
Query: 380 TSEPRQRTASRALE-DRGATTRSEAQRALYVHTRQRSVARERR 255
+S R R+ SR DRG RS ++ TR+RS +RERR
Sbjct: 46 SSSRRSRSRSRDRRGDRGDRRRSRSRSKDRRTTRRRSPSRERR 88
>AC006729-6|AAF60464.1| 282|Caenorhabditis elegans Hypothetical
protein Y24D9A.5 protein.
Length = 282
Score = 27.1 bits (57), Expect = 7.2
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = -1
Query: 395 RRHFPTSEPRQRTASRALEDRGATTRSEAQRALYVHTRQRSVARERRSVTSNAHRSSHLG 216
+ +F P A+ A E R A + ++RAL R+ S+ R + T HR H
Sbjct: 16 QNNFSQQNPGGGAAATA-ELRAARALALSRRAL----REHSLCRRDENGTVRTHRHHHRA 70
Query: 215 MAAH 204
+AAH
Sbjct: 71 VAAH 74
>AL117204-6|CAB55149.2| 833|Caenorhabditis elegans Hypothetical
protein Y116A8C.13 protein.
Length = 833
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2
Query: 394 ADISQHPNHDSEQPPELLKTAVPRRGAK 311
AD++ DS++PPE K AV G +
Sbjct: 756 ADVTDEVVEDSQEPPEATKPAVAAAGLR 783
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,094,243
Number of Sequences: 27780
Number of extensions: 175905
Number of successful extensions: 689
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 689
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 903458030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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