Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0204.Seq
         (797 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0094 - 25758213-25758479,25758886-25758975,25759090-257591...    30   2.5  
10_08_0304 - 16640937-16642877                                         29   3.2  
09_04_0318 - 16620177-16620582,16620686-16620765,16620873-166212...    29   5.7  
07_01_0346 - 2501825-2501908,2502143-2502244,2502623-2502646,250...    28   7.5  
03_05_0890 - 28547462-28547545,28548451-28548528,28548641-285488...    28   7.5  
05_05_0204 + 23241555-23241696,23241770-23242910,23243058-23243583     28   9.9  
03_02_0476 + 8768182-8768313,8768734-8768833,8768949-8768986,876...    28   9.9  

>02_05_0094 -
           25758213-25758479,25758886-25758975,25759090-25759118,
           25759208-25759307,25759411-25759545
          Length = 206

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 11/54 (20%), Positives = 25/54 (46%)
 Frame = +2

Query: 347 GNGQEGDNPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKC 508
           G   E  + G +    +S  +  +  C+ C + +    K+ ++ +++H  C KC
Sbjct: 80  GKSSEKSDQGRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKC 133


>10_08_0304 - 16640937-16642877
          Length = 646

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
 Frame = +2

Query: 221 GGEDVLRARILHGCFKQHVLD----RFRGECPSVHTNWAQWTCGKFGNGQEGDNPGASSK 388
           GG+ V  A   H  F  H +     R R  CP  H  W +     F  G +   PGAS+ 
Sbjct: 20  GGDAVFTAECSHQ-FHFHCISGTVARGRIACPLCHARWRE--LPSFRRGNDAAPPGASAS 76

Query: 389 SEAS 400
           + AS
Sbjct: 77  ASAS 80


>09_04_0318 -
           16620177-16620582,16620686-16620765,16620873-16621213,
           16621298-16621559
          Length = 362

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 15/56 (26%), Positives = 24/56 (42%)
 Frame = +2

Query: 431 RCLQMINENNKIEIDKQAFHSHCAKCIFATRFHRPTSTSAMVKSSASLASNITSCT 598
           RC + + E N+  + K+       K +     H P +T +M  S   +ASN    T
Sbjct: 243 RCCETLTEENR-RLQKELAELRALKTVHPFYMHLPATTLSMCPSCERVASNSAPAT 297


>07_01_0346 -
           2501825-2501908,2502143-2502244,2502623-2502646,
           2502693-2502819,2503122-2505109,2505804-2505821
          Length = 780

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
 Frame = +2

Query: 305 SVHTNWAQWTCG---KFGNGQEGDNPGASSKSEASEGNTKRSVCSRCLQMINENN 460
           S H ++  W+ G   KF   + G+    SS  E     T++SVC R  ++I+E +
Sbjct: 269 SKHEHFGNWSSGWKHKFFGKKSGEERTPSSNEENISSATQKSVCPR--EVISEKS 321


>03_05_0890 -
           28547462-28547545,28548451-28548528,28548641-28548814,
           28548902-28548958,28549065-28549116,28549907-28549995,
           28550259-28550344,28550427-28550637,28551790-28551882,
           28551958-28552098,28552175-28552267,28553879-28554113,
           28554263-28554435,28555234-28556571,28556668-28556853,
           28557625-28557713,28557756-28557905,28557951-28558596
          Length = 1324

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 16/66 (24%), Positives = 30/66 (45%)
 Frame = +2

Query: 314 TNWAQWTCGKFGNGQEGDNPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHS 493
           ++WA  T G  G G+  ++P   + + + EG  K S    C+ ++    +   D+    S
Sbjct: 180 SSWADSTSGSRGKGKAAEHPARGATATSLEG--KSSAKGFCIMILQAGYRFLEDRGISLS 237

Query: 494 HCAKCI 511
             + CI
Sbjct: 238 LPSSCI 243


>05_05_0204 + 23241555-23241696,23241770-23242910,23243058-23243583
          Length = 602

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 13/44 (29%), Positives = 19/44 (43%)
 Frame = -1

Query: 236 EHLHRRRNCSADATRAANSMKALPCYFNGVFRIHR*KTSSTKWL 105
           E  H R  CS  AT  A ++  +PC +     I    + +  WL
Sbjct: 8   ETTHNRAYCSEAATAIAVAVAVVPCIYRRATEISHKYSGAAHWL 51


>03_02_0476 +
           8768182-8768313,8768734-8768833,8768949-8768986,
           8769102-8769191,8769465-8769695
          Length = 196

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +2

Query: 425 CSRCLQMINENNKIEIDKQAFHSHCAKC 508
           C+ C +      K+ ++ QA+H  C KC
Sbjct: 108 CATCSKTAYPLEKVTVEGQAYHKSCFKC 135


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,583,506
Number of Sequences: 37544
Number of extensions: 457014
Number of successful extensions: 1323
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1323
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)