Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0198.Seq
(797 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC63.04 |mok14||alpha-1,3-glucan synthase Mok14|Schizosaccharo... 30 0.44
SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces ... 28 1.3
SPAC2G11.03c |vps45||vacuolar sorting protein Vps 45|Schizosacch... 27 2.4
SPBC2G2.10c |mug110||sequence orphan|Schizosaccharomyces pombe|c... 27 3.1
SPBC577.05c |rec27|mug41|meiotic recombination protein Rec27|Sch... 27 3.1
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 27 3.1
SPMIT.08 |||mitochondrial ribosomal small subunit|Schizosaccharo... 27 4.1
SPAC1006.03c |||human CCDC131 homolog|Schizosaccharomyces pombe|... 26 5.4
SPBC11G11.02c |end3||actin cortical patch component End3 |Schizo... 26 7.2
SPBC25B2.06c |btb2||BTB/POZ domain protein Btb2|Schizosaccharomy... 26 7.2
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 26 7.2
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 26 7.2
SPAC227.16c |||GINS complex subunit Psf3|Schizosaccharomyces pom... 25 9.5
>SPCC63.04 |mok14||alpha-1,3-glucan synthase
Mok14|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1369
Score = 29.9 bits (64), Expect = 0.44
Identities = 18/73 (24%), Positives = 31/73 (42%)
Frame = +2
Query: 149 KKPELYGSTIGKIRMGSRHQNSISQSRKSRIRDYSLNRQNEIQQLKESFILQQQKREDLN 328
KK L+ G I + S S+ ++ +SL + ++ FI+ + ED N
Sbjct: 5 KKSFLFQFLFGWIVLSSAQWLSVLDEAENLNSSFSLESVDSFAPVRPRFIIDEDFAEDYN 64
Query: 329 KYKEFVHSEYQEN 367
+ +H QEN
Sbjct: 65 LTVDILHRPLQEN 77
>SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2493
Score = 28.3 bits (60), Expect = 1.3
Identities = 32/141 (22%), Positives = 56/141 (39%)
Frame = +3
Query: 51 QTRKYEGRIE*KILLDIV*SKLQILNNKMSEQRKNPSYMAQLLEKLGWDQGIRIPLANPG 230
Q+ + E ++ KIL ++V + ++ +S KNP + G Q +
Sbjct: 1159 QSEESESQLREKILANLVMPNITLIFASLSNILKNPQFCNNNRVMDGSVQALSAVSEYMS 1218
Query: 231 NQELETIL*TGKMKFSSLKNHLYYSNKKERILISIRSLCTLNIKRILASYLLTSSSWSRK 410
+ L + F N L SN K IL+ + L N K + AS T+ +
Sbjct: 1219 LDIDSSPLLNLLVSFLRKPNRLVPSNVKSNILVLLCKLLPTNTKWLHASISQTNDFDTIM 1278
Query: 411 LNYGSWLVVKQMDLIEELLTV 473
Y S + +K + +LL +
Sbjct: 1279 HLYTSMVDIKARQHLNDLLKI 1299
>SPAC2G11.03c |vps45||vacuolar sorting protein Vps
45|Schizosaccharomyces pombe|chr 1|||Manual
Length = 558
Score = 27.5 bits (58), Expect = 2.4
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +2
Query: 254 LNRQN--EIQQLKESFILQQQKREDLNKYKEFVHSEYQENTRLLFAHKQQLEQE 409
+ R+N E+ ++++S + + + D N + + S ENT+L A L E
Sbjct: 342 VQRENLLEVGEVEQSLVCNEPQSTDFNDIQRLLFSNISENTKLRLAALYSLRFE 395
>SPBC2G2.10c |mug110||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 248
Score = 27.1 bits (57), Expect = 3.1
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -3
Query: 357 YSECTNSLYLLRSSLFCCCSIND 289
Y CT L S+FCC SI+D
Sbjct: 46 YHSCTYQKNRLLRSIFCCMSIDD 68
>SPBC577.05c |rec27|mug41|meiotic recombination protein
Rec27|Schizosaccharomyces pombe|chr 2|||Manual
Length = 134
Score = 27.1 bits (57), Expect = 3.1
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = +2
Query: 245 DYSLNRQNEIQQLKESFILQQQKREDLNKYKEFVHSEYQENTRLLFAHKQQLEQEVKLRQ 424
+Y N +NE + + QQK ++ K + E + A KQQLE E++ +
Sbjct: 52 EYKTNIENEKKAFIKDVSQVQQKIKEFEIQKANQIKQLNEEKLSIEARKQQLEIEIRNQL 111
Query: 425 LACSE 439
L +E
Sbjct: 112 LQYAE 116
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 27.1 bits (57), Expect = 3.1
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +2
Query: 284 KESFILQQQKR-EDLNKYKEFVHSEYQENTRLLFAHKQQLEQEVKLRQLACSETDGLDRG 460
KES ILQ R DL +K V SE + L + ++L QLA +E L
Sbjct: 1571 KESEILQFNSRLADLEYHKSQVESELGRSKLKLASTTEEL-------QLAENERLSLTTR 1623
Query: 461 VIDCQXQCKDIGTRVD 508
++D Q Q KD+ D
Sbjct: 1624 MLDLQNQVKDLSNIKD 1639
>SPMIT.08 |||mitochondrial ribosomal small
subunit|Schizosaccharomyces pombe|chr
mitochondrial|||Manual
Length = 227
Score = 26.6 bits (56), Expect = 4.1
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +3
Query: 279 SLKNHLYYSNKKERILISIRSL 344
+L NHL YS+K +++IR+L
Sbjct: 82 ALSNHLLYSSKNYSFIVNIRAL 103
>SPAC1006.03c |||human CCDC131 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 714
Score = 26.2 bits (55), Expect = 5.4
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +2
Query: 299 LQQQKREDLNKYKEFVHSEYQENTRLLFAHKQQLEQEVKLRQLAC 433
L +++ +L KY+ V S+ + T+L KQ LEQ+ K +AC
Sbjct: 484 LIEKEEGELTKYQTLVKSKTEILTQLYTRKKQLLEQQGK-GNVAC 527
>SPBC11G11.02c |end3||actin cortical patch component End3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 375
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/46 (26%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +2
Query: 194 GSRHQNSISQSRKSRIRDYSL-NRQNEIQQLKESFILQQQKREDLN 328
G++ ++ + R R D+ L + +NE+ +L E + Q++ +D+N
Sbjct: 254 GAKPKSDLDAPRDVRDSDWELISLRNELSKLDEKILSLQRETDDVN 299
>SPBC25B2.06c |btb2||BTB/POZ domain protein Btb2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 284
Score = 25.8 bits (54), Expect = 7.2
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 577 VHHTPQISMYQPXLADEQCLFVI 509
VH+T ++ P + E CLFV+
Sbjct: 74 VHYTIEVETEDPYVTKESCLFVL 96
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 25.8 bits (54), Expect = 7.2
Identities = 20/93 (21%), Positives = 34/93 (36%)
Frame = +2
Query: 131 QNE*TTKKPELYGSTIGKIRMGSRHQNSISQSRKSRIRDYSLNRQNEIQQLKESFILQQQ 310
+N+ + E S + ++ Q +RK + + +Q+LKES
Sbjct: 774 ENDKLLAERERLMSLVSDLQTFLNQQQLSDAARKVKFESEKESLSLSLQKLKESNEKMSN 833
Query: 311 KREDLNKYKEFVHSEYQENTRLLFAHKQQLEQE 409
L K E EY + L KQ L ++
Sbjct: 834 DLHSLQKSLEKSGIEYSSRIKTLMLEKQSLSED 866
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +2
Query: 224 SRKSRIRDYSLNRQNEIQQLKESFILQQQKREDLNKYKEFVHSEYQE 364
+ K I + N+Q EI L + ++K + K ++ + S+Y+E
Sbjct: 923 AEKQSIEEDLANKQTEISYLSDLSSTLEKKLSSIKKDEQTISSKYKE 969
>SPAC227.16c |||GINS complex subunit Psf3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 166
Score = 25.4 bits (53), Expect = 9.5
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +2
Query: 89 IVRYCIK*TPNS*QQNE*TTKKPELYGSTIGKIRMGSRHQNSIS--QSRKSRIRDYSLNR 262
+VR +K PNS + TT + I S Q S++ +SR I D SLN
Sbjct: 67 VVRNALKANPNSVSIRDITTHYYHFAEKMLHLISDDSLVQISLNTLRSRAMLIADASLNP 126
Query: 263 QNEIQQ 280
Q +QQ
Sbjct: 127 QGALQQ 132
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,834,617
Number of Sequences: 5004
Number of extensions: 52718
Number of successful extensions: 185
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 185
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 389395636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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