Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0198.Seq
         (797 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    27   0.51 
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   8.3  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 27.5 bits (58), Expect = 0.51
 Identities = 15/74 (20%), Positives = 35/74 (47%)
 Frame = +2

Query: 188 RMGSRHQNSISQSRKSRIRDYSLNRQNEIQQLKESFILQQQKREDLNKYKEFVHSEYQEN 367
           R   +HQ    Q ++ R +     +Q + QQ ++    QQQ+R+   + ++    +  + 
Sbjct: 306 RQQQQHQQQQQQQQQQR-QQQQRQQQRQQQQRQQQQQQQQQQRQQQQRQQQQQQQQQHQQ 364

Query: 368 TRLLFAHKQQLEQE 409
            +  +  +QQ +Q+
Sbjct: 365 QQQQWQQQQQQQQQ 378



 Score = 26.2 bits (55), Expect = 1.2
 Identities = 16/79 (20%), Positives = 36/79 (45%)
 Frame = +2

Query: 188 RMGSRHQNSISQSRKSRIRDYSLNRQNEIQQLKESFILQQQKREDLNKYKEFVHSEYQEN 367
           R   + Q    Q +  R     L +Q + QQ ++    QQQ+R+   + ++    + Q+ 
Sbjct: 280 RQQQQQQQQQQQQQGERYVPPQLRQQRQQQQHQQQQQQQQQQRQQQQRQQQRQQQQRQQQ 339

Query: 368 TRLLFAHKQQLEQEVKLRQ 424
            +     +QQ +++ + +Q
Sbjct: 340 QQQQQQQRQQQQRQQQQQQ 358



 Score = 25.4 bits (53), Expect = 2.0
 Identities = 16/71 (22%), Positives = 34/71 (47%)
 Frame = +2

Query: 194 GSRHQNSISQSRKSRIRDYSLNRQNEIQQLKESFILQQQKREDLNKYKEFVHSEYQENTR 373
           G       ++ R+ R+R     RQ + QQ ++    QQQ+++   + ++    + Q+  +
Sbjct: 164 GQGGNRETARKRQQRLRRRERERQQQQQQQQQQQQQQQQQQQQQRQQQQQCQQQRQQQPQ 223

Query: 374 LLFAHKQQLEQ 406
                +QQL+Q
Sbjct: 224 -----QQQLQQ 229



 Score = 25.4 bits (53), Expect = 2.0
 Identities = 13/63 (20%), Positives = 32/63 (50%)
 Frame = +2

Query: 236 RIRDYSLNRQNEIQQLKESFILQQQKREDLNKYKEFVHSEYQENTRLLFAHKQQLEQEVK 415
           ++R     +Q++ QQ ++    QQQ+R+   + ++    + Q+  +     +QQ +Q+ +
Sbjct: 301 QLRQQRQQQQHQQQQQQQQQQRQQQQRQQQRQQQQRQQQQQQQQQQRQQQQRQQQQQQQQ 360

Query: 416 LRQ 424
             Q
Sbjct: 361 QHQ 363


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 621 RSSL*SSSPFLQGSTFTTHLRFQCISL 541
           R ++   +PFLQ      H+RF  +SL
Sbjct: 917 RQAIILKAPFLQKDVLNIHVRFFMLSL 943


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 707,559
Number of Sequences: 2352
Number of extensions: 12520
Number of successful extensions: 28
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83992206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)