Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0197.Seq
         (788 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    22   6.4  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    21   8.5  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   8.5  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   8.5  

>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 244 HNRYALWKFETSKY 285
           HN+  +WK  T+KY
Sbjct: 90  HNKQQMWKELTAKY 103


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -3

Query: 747 PGSWQDGIETSMRHFXSAWPSLRSTAI 667
           P S+   + TSMR     W S  ST I
Sbjct: 196 PRSYIPPLSTSMRSHLCNWGSANSTNI 222


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -3

Query: 747 PGSWQDGIETSMRHFXSAWPSLRSTAI 667
           P S+   + TSMR     W S  ST I
Sbjct: 356 PRSYIPPLSTSMRSHLCNWGSANSTNI 382


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -3

Query: 747 PGSWQDGIETSMRHFXSAWPSLRSTAI 667
           P S+   + TSMR     W S  ST I
Sbjct: 356 PRSYIPPLSTSMRSHLCNWGSANSTNI 382


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,607
Number of Sequences: 336
Number of extensions: 4014
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)