Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0197.Seq
(788 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 213 9e-56
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 213 9e-56
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 149 3e-36
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 146 2e-35
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 138 3e-33
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 120 9e-28
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 120 9e-28
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 116 2e-26
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 70 2e-12
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 70 2e-12
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 66 2e-11
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 66 2e-11
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 66 2e-11
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 45 5e-05
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 40 0.002
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 35 0.076
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 34 0.10
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 34 0.13
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.18
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 33 0.31
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 33 0.31
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 32 0.54
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 31 0.94
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 31 0.94
AC024808-3|AAK29925.1| 183|Caenorhabditis elegans Hypothetical ... 31 1.2
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 30 1.6
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 30 1.6
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 2.9
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 2.9
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 8.8
AL023856-2|CAA19567.1| 327|Caenorhabditis elegans Hypothetical ... 28 8.8
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 213 bits (521), Expect = 9e-56
Identities = 112/175 (64%), Positives = 125/175 (71%), Gaps = 2/175 (1%)
Frame = +1
Query: 256 ALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 435
ALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTRE
Sbjct: 76 ALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTRE 135
Query: 436 HALLAFTLGVKQLIVGVNKMDSTEHHTVSPDLRKSRRKYPHTFKKIGYNPAAVAFVPISG 615
HALLA TLGVKQLIV NKMDSTE + + KKIGYNP AV FVPISG
Sbjct: 136 HALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISG 195
Query: 616 WHGDNMLEPSTKM--LGSXDGSGA*GRPS*XEMPH*SLDAILPTARPTDKPXVFP 774
++GDNMLE S+ M G S + +LD+I+P RPTD+P P
Sbjct: 196 FNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLE-ALDSIIPPQRPTDRPLRLP 249
Score = 146 bits (353), Expect = 2e-35
Identities = 67/68 (98%), Positives = 67/68 (98%)
Frame = +3
Query: 33 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 212
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 213 DKLKAERE 236
DKLKAERE
Sbjct: 61 DKLKAERE 68
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 213 bits (521), Expect = 9e-56
Identities = 112/175 (64%), Positives = 125/175 (71%), Gaps = 2/175 (1%)
Frame = +1
Query: 256 ALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 435
ALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTRE
Sbjct: 76 ALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTRE 135
Query: 436 HALLAFTLGVKQLIVGVNKMDSTEHHTVSPDLRKSRRKYPHTFKKIGYNPAAVAFVPISG 615
HALLA TLGVKQLIV NKMDSTE + + KKIGYNP AV FVPISG
Sbjct: 136 HALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISG 195
Query: 616 WHGDNMLEPSTKM--LGSXDGSGA*GRPS*XEMPH*SLDAILPTARPTDKPXVFP 774
++GDNMLE S+ M G S + +LD+I+P RPTD+P P
Sbjct: 196 FNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLE-ALDSIIPPQRPTDRPLRLP 249
Score = 146 bits (353), Expect = 2e-35
Identities = 67/68 (98%), Positives = 67/68 (98%)
Frame = +3
Query: 33 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 212
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 213 DKLKAERE 236
DKLKAERE
Sbjct: 61 DKLKAERE 68
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 149 bits (360), Expect = 3e-36
Identities = 68/74 (91%), Positives = 72/74 (97%)
Frame = +1
Query: 256 ALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 435
ALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTRE
Sbjct: 76 ALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTRE 135
Query: 436 HALLAFTLGVKQLI 477
HALLA TLGVKQL+
Sbjct: 136 HALLAQTLGVKQLV 149
Score = 146 bits (353), Expect = 2e-35
Identities = 67/68 (98%), Positives = 67/68 (98%)
Frame = +3
Query: 33 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 212
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 213 DKLKAERE 236
DKLKAERE
Sbjct: 61 DKLKAERE 68
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 146 bits (353), Expect = 2e-35
Identities = 67/68 (98%), Positives = 67/68 (98%)
Frame = +3
Query: 33 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 212
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 213 DKLKAERE 236
DKLKAERE
Sbjct: 61 DKLKAERE 68
Score = 90.6 bits (215), Expect(2) = 9e-34
Identities = 39/42 (92%), Positives = 42/42 (100%)
Frame = +1
Query: 256 ALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 381
ALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 76 ALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 71.3 bits (167), Expect(2) = 9e-34
Identities = 44/103 (42%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Frame = +1
Query: 472 LIVGVNKMDSTEHHTVSPDLRKSRRKYPHTFKKIGYNPAAVAFVPISGWHGDNMLEPSTK 651
L+V NKMDSTE + + KKIGYNP AV FVPISG++GDNMLE S+
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 173
Query: 652 M--LGSXDGSGA*GRPS*XEMPH*SLDAILPTARPTDKPXVFP 774
M G S + +LD+I+P RPTD+P P
Sbjct: 174 MPWFKGWAVERKEGNASGKTLLE-ALDSIIPPQRPTDRPLRLP 215
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 138 bits (335), Expect = 3e-33
Identities = 63/67 (94%), Positives = 64/67 (95%)
Frame = +3
Query: 33 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 212
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 213 DKLKAER 233
DKLK +
Sbjct: 61 DKLKVTK 67
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 120 bits (290), Expect = 9e-28
Identities = 62/124 (50%), Positives = 84/124 (67%)
Frame = +1
Query: 268 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALL 447
FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G GQT+EHALL
Sbjct: 243 FETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEHALL 302
Query: 448 AFTLGVKQLIVGVNKMDSTEHHTVSPDLRKSRRKYPHTFKKIGYNPAAVAFVPISGWHGD 627
+LGV QLIV VNK+D+ + D K+ T ++ G++ FVP+SG+ G+
Sbjct: 303 LRSLGVTQLIVAVNKLDTVDWSQDRFDEIKNNLSVFLT-RQAGFSKP--KFVPVSGFTGE 359
Query: 628 NMLE 639
N+++
Sbjct: 360 NLIK 363
Score = 83.0 bits (196), Expect = 2e-16
Identities = 36/65 (55%), Positives = 48/65 (73%)
Frame = +3
Query: 42 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 221
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 222 KAERE 236
+ ERE
Sbjct: 227 EEERE 231
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 120 bits (290), Expect = 9e-28
Identities = 62/124 (50%), Positives = 84/124 (67%)
Frame = +1
Query: 268 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALL 447
FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G GQT+EHALL
Sbjct: 261 FETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEHALL 320
Query: 448 AFTLGVKQLIVGVNKMDSTEHHTVSPDLRKSRRKYPHTFKKIGYNPAAVAFVPISGWHGD 627
+LGV QLIV VNK+D+ + D K+ T ++ G++ FVP+SG+ G+
Sbjct: 321 LRSLGVTQLIVAVNKLDTVDWSQDRFDEIKNNLSVFLT-RQAGFSKP--KFVPVSGFTGE 377
Query: 628 NMLE 639
N+++
Sbjct: 378 NLIK 381
Score = 83.0 bits (196), Expect = 2e-16
Identities = 36/65 (55%), Positives = 48/65 (73%)
Frame = +3
Query: 42 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 221
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 222 KAERE 236
+ ERE
Sbjct: 245 EEERE 249
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 116 bits (279), Expect = 2e-26
Identities = 55/120 (45%), Positives = 75/120 (62%), Gaps = 1/120 (0%)
Frame = +1
Query: 268 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALL 447
FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A GEFE G + GQTREH++L
Sbjct: 182 FETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFETGFDRGGQTREHSML 241
Query: 448 AFTLGVKQLIVGVNKMDSTEHHTVSPDLRKSRRKYPHTFKKIGYNPAA-VAFVPISGWHG 624
T GVK L++ VNKMD ++ K +K+G+NP + +VP SG G
Sbjct: 242 VKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKLGFNPKTDITYVPCSGLTG 301
Score = 79.0 bits (186), Expect = 4e-15
Identities = 34/67 (50%), Positives = 48/67 (71%)
Frame = +3
Query: 36 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 215
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 216 KLKAERE 236
ERE
Sbjct: 164 TNDEERE 170
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 69.7 bits (163), Expect = 2e-12
Identities = 36/69 (52%), Positives = 44/69 (63%)
Frame = +1
Query: 301 DAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIV 480
D PGH DFIKNMI GTSQ D AVL++AA G E QT+EH +LA +GVK + +
Sbjct: 114 DCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME-------QTKEHLILAKQVGVKNMAI 166
Query: 481 GVNKMDSTE 507
+NK D E
Sbjct: 167 FINKADLVE 175
Score = 28.7 bits (61), Expect = 5.0
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 45 KTHINIVVIGHVDSGKSTTT 104
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 69.7 bits (163), Expect = 2e-12
Identities = 36/69 (52%), Positives = 44/69 (63%)
Frame = +1
Query: 301 DAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIV 480
D PGH DFIKNMI GTSQ D AVL++AA G E QT+EH +LA +GVK + +
Sbjct: 114 DCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME-------QTKEHLILAKQVGVKNMAI 166
Query: 481 GVNKMDSTE 507
+NK D E
Sbjct: 167 FINKADLVE 175
Score = 28.7 bits (61), Expect = 5.0
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 45 KTHINIVVIGHVDSGKSTTT 104
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 66.5 bits (155), Expect = 2e-11
Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Frame = +1
Query: 265 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 444
++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G QTREH L
Sbjct: 106 EYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHLL 158
Query: 445 LAFTLGV--KQLIVGVNKMD 498
LA +GV ++V +NK+D
Sbjct: 159 LARQVGVPLDNIVVFMNKVD 178
Score = 36.3 bits (80), Expect = 0.025
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +3
Query: 39 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 209
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 104
Query: 210 LDKLKAER 233
L+ A+R
Sbjct: 105 LEYETAKR 112
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 66.5 bits (155), Expect = 2e-11
Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Frame = +1
Query: 265 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 444
++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G QTREH L
Sbjct: 107 EYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHLL 159
Query: 445 LAFTLGV--KQLIVGVNKMD 498
LA +GV ++V +NK+D
Sbjct: 160 LARQVGVPLDNIVVFMNKVD 179
Score = 36.3 bits (80), Expect = 0.025
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +3
Query: 39 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 209
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 105
Query: 210 LDKLKAER 233
L+ A+R
Sbjct: 106 LEYETAKR 113
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 66.5 bits (155), Expect = 2e-11
Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Frame = +1
Query: 265 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 444
++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G QTREH L
Sbjct: 107 EYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHLL 159
Query: 445 LAFTLGV--KQLIVGVNKMD 498
LA +GV ++V +NK+D
Sbjct: 160 LARQVGVPLDNIVVFMNKVD 179
Score = 36.3 bits (80), Expect = 0.025
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +3
Query: 39 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 209
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 105
Query: 210 LDKLKAER 233
L+ A+R
Sbjct: 106 LEYETAKR 113
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 45.2 bits (102), Expect = 5e-05
Identities = 27/86 (31%), Positives = 45/86 (52%)
Frame = +1
Query: 289 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 468
+ +ID PGH I+ ++ ++ D A++I+ + AGI QT EH LLA
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPN 126
Query: 469 QLIVGVNKMDSTEHHTVSPDLRKSRR 546
++I+ +NK D E +S +K R+
Sbjct: 127 RVIIVLNKCDLAEKSKISESAKKVRK 152
Score = 28.7 bits (61), Expect = 5.0
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 54 INIVVIGHVDSGKSTTT 104
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/70 (40%), Positives = 33/70 (47%)
Frame = +1
Query: 289 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 468
VT +D PGH F G AD VL+VAA G E QT + A V
Sbjct: 206 VTFLDTPGHAAFASMRARGAKGADIVVLVVAADDGVKE-------QTAQSIKFAKDANV- 257
Query: 469 QLIVGVNKMD 498
QL+V VNK+D
Sbjct: 258 QLVVAVNKID 267
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 34.7 bits (76), Expect = 0.076
Identities = 24/72 (33%), Positives = 35/72 (48%)
Frame = +1
Query: 283 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG 462
Y + +ID PGH DF + + D +L+VAA G QT + LAF
Sbjct: 102 YLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG-------VQAQTIANFWLAFEKN 154
Query: 463 VKQLIVGVNKMD 498
+ Q+I +NK+D
Sbjct: 155 I-QIIPVINKID 165
Score = 32.3 bits (70), Expect = 0.41
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +3
Query: 57 NIVVIGHVDSGKSTTTGHLIYKCGGI---DKRTIEKFEKEAQ 173
N ++ HVD GKST L+ CG + K+ ++K + E +
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPGQKQMLDKLQVERE 85
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 34.3 bits (75), Expect = 0.10
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +3
Query: 57 NIVVIGHVDSGKSTTTGHLIYKCGGI 134
NI VI HVD+GK+T T L+Y G I
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAI 52
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 33.9 bits (74), Expect = 0.13
Identities = 20/71 (28%), Positives = 32/71 (45%)
Frame = +1
Query: 286 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 465
+V+ +D PGH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 466 KQLIVGVNKMD 498
L++ NK+D
Sbjct: 182 NHLMILQNKVD 192
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 33.5 bits (73), Expect = 0.18
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -1
Query: 491 LFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 363
LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 33.1 bits (72), Expect = 0.23
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 57 NIVVIGHVDSGKSTTTGHLIYKCGGID 137
NI + H+DSGK+T T ++Y G ID
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRID 72
Score = 28.3 bits (60), Expect = 6.6
Identities = 23/70 (32%), Positives = 30/70 (42%)
Frame = +1
Query: 289 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 468
+ IID PGH DF + D AVL++ G G G+ T L + +
Sbjct: 114 INIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG----GVQSQTFTVNRQLARYNV--- 165
Query: 469 QLIVGVNKMD 498
I VNKMD
Sbjct: 166 PFICFVNKMD 175
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.31
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 33 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 128
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +1
Query: 283 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 393
+ + +ID+PGH DF + D A+++V +G
Sbjct: 110 FLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.31
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 33 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 128
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +1
Query: 283 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 393
+ + +ID+PGH DF + D A+++V +G
Sbjct: 110 FLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 31.9 bits (69), Expect = 0.54
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 5/107 (4%)
Frame = +1
Query: 295 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 474
IID PGH F G+S D A+L+V + G+ QT E +L G
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV-----DIMHGLEP--QTIE-SLKLLIKGKTPF 604
Query: 475 IVGVNKMDSTEHHTVSP-----DLRKSRRKYPHTFKKIGYNPAAVAF 600
++ +NK+D + +P +L KS++ K +N V F
Sbjct: 605 VIALNKIDRLYEYESNPRKDVYELLKSQKPRVQAEFKERFNQIVVEF 651
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 31.1 bits (67), Expect = 0.94
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 9 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 119
++IRD P K+ + V+G+VD+GKST G L +
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 31.1 bits (67), Expect = 0.94
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 9 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 119
++IRD P K+ + V+G+VD+GKST G L +
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AC024808-3|AAK29925.1| 183|Caenorhabditis elegans Hypothetical
protein Y53G8AM.6 protein.
Length = 183
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = -3
Query: 609 NGHESDSSWVVANLLECMRILPS*FPQIWAHCMVFSGIHF--VYSYDELFDTEGESEQ 442
NGH SD + ++ C+RIL S ++ H ++ +F + S+D+L E + E+
Sbjct: 40 NGHFSDLASFQVSIEVCVRILLSLVHNVFVHASYYNVFNFENLVSFDKLLPAEKDLEK 97
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 274 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 393
+ Y + IID PGH +F M AD V++V A G
Sbjct: 198 SKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 274 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 393
+ Y + IID PGH +F M AD V++V A G
Sbjct: 73 SKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 135 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 236
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 135 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 236
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 5.0
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 54 INIVVIGHVDSGKSTTT 104
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +1
Query: 289 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 384
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
>AL023856-2|CAA19567.1| 327|Caenorhabditis elegans Hypothetical
protein Y94A7B.5 protein.
Length = 327
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 472 LIVGVNKMDSTEHHTVSPDLRKSRRKYPHTFKKIGYNPAAVAFVPISG 615
L V +NK H +VS D K ++++ + K P A+ F P +G
Sbjct: 212 LRVKINKAIKNIHSSVSRDTLKKQKRFMNALKIQIAIPIAIIFFPAAG 259
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,291,851
Number of Sequences: 27780
Number of extensions: 394478
Number of successful extensions: 1230
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1208
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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