Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0195.Seq
(797 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X80030-1|CAA56334.1| 790|Homo sapiens cap binding protein protein. 134 3e-31
D32002-1|BAA06769.1| 790|Homo sapiens nuclear cap binding prote... 134 3e-31
BC001450-1|AAH01450.1| 790|Homo sapiens nuclear cap binding pro... 134 3e-31
AL445531-3|CAI15431.1| 790|Homo sapiens nuclear cap binding pro... 134 3e-31
AL162385-8|CAI12861.1| 790|Homo sapiens nuclear cap binding pro... 134 3e-31
AB209233-1|BAD92470.1| 803|Homo sapiens nuclear cap binding pro... 134 5e-31
>X80030-1|CAA56334.1| 790|Homo sapiens cap binding protein protein.
Length = 790
Score = 134 bits (324), Expect = 3e-31
Identities = 71/164 (43%), Positives = 102/164 (62%)
Frame = +2
Query: 263 KILRILTDCAIRMPEKCTIYATLVGLLNAKNYNFGGEFVDYIVKTFKENLKVGKWNAARY 442
KILR+L A +PEK TIY TLVGLLNA+NYNFGGEFV+ +++ KE+LK +N A Y
Sbjct: 67 KILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKANNYNEAVY 126
Query: 443 CLRFIADLVNCHVLAASSLLTL*RH**ILLMKMEYLTSEGIGLYLAVLSALPWVGREXYX 622
+RF++DLVNCHV+AA S++ + + + + + A LS+LPWVG+E Y
Sbjct: 127 LVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSLPWVGKELYE 186
Query: 623 KKXSQLDHLLVTIEGFLQ*TGVRNIGPXLKXVGPADSPPLXEGY 754
KK +++D + E +L+ ++ P L+ V AD P E Y
Sbjct: 187 KKDAEMDRIFANTESYLKRRQKTHV-PMLQ-VWTADKPHPQEEY 228
Score = 44.0 bits (99), Expect = 6e-04
Identities = 27/69 (39%), Positives = 35/69 (50%)
Frame = +3
Query: 60 MNRRRGHDDEEGYERLHRKRRRVSENQEIEDRLESLILRVGXXXXXXXXXXXXXXXXVLE 239
M+RRR D+ +G + KRR+ S+ E ED LESLI +VG VLE
Sbjct: 1 MSRRRHSDENDGGQP--HKRRKTSDANETEDHLESLICKVGEKSACSLESNLEGLAGVLE 58
Query: 240 ADLSTLELK 266
ADL + K
Sbjct: 59 ADLPNYKSK 67
>D32002-1|BAA06769.1| 790|Homo sapiens nuclear cap binding protein
protein.
Length = 790
Score = 134 bits (324), Expect = 3e-31
Identities = 71/164 (43%), Positives = 102/164 (62%)
Frame = +2
Query: 263 KILRILTDCAIRMPEKCTIYATLVGLLNAKNYNFGGEFVDYIVKTFKENLKVGKWNAARY 442
KILR+L A +PEK TIY TLVGLLNA+NYNFGGEFV+ +++ KE+LK +N A Y
Sbjct: 67 KILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKANNYNEAVY 126
Query: 443 CLRFIADLVNCHVLAASSLLTL*RH**ILLMKMEYLTSEGIGLYLAVLSALPWVGREXYX 622
+RF++DLVNCHV+AA S++ + + + + + A LS+LPWVG+E Y
Sbjct: 127 LVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSLPWVGKELYE 186
Query: 623 KKXSQLDHLLVTIEGFLQ*TGVRNIGPXLKXVGPADSPPLXEGY 754
KK +++D + E +L+ ++ P L+ V AD P E Y
Sbjct: 187 KKDAEMDRIFANTESYLKRRQKTHV-PMLQ-VWTADKPHPQEEY 228
Score = 44.0 bits (99), Expect = 6e-04
Identities = 27/69 (39%), Positives = 35/69 (50%)
Frame = +3
Query: 60 MNRRRGHDDEEGYERLHRKRRRVSENQEIEDRLESLILRVGXXXXXXXXXXXXXXXXVLE 239
M+RRR D+ +G + KRR+ S+ E ED LESLI +VG VLE
Sbjct: 1 MSRRRHSDENDGGQP--HKRRKTSDANETEDHLESLICKVGEKSACSLESNLEGLAGVLE 58
Query: 240 ADLSTLELK 266
ADL + K
Sbjct: 59 ADLPNYKSK 67
>BC001450-1|AAH01450.1| 790|Homo sapiens nuclear cap binding
protein subunit 1, 80kDa protein.
Length = 790
Score = 134 bits (324), Expect = 3e-31
Identities = 71/164 (43%), Positives = 102/164 (62%)
Frame = +2
Query: 263 KILRILTDCAIRMPEKCTIYATLVGLLNAKNYNFGGEFVDYIVKTFKENLKVGKWNAARY 442
KILR+L A +PEK TIY TLVGLLNA+NYNFGGEFV+ +++ KE+LK +N A Y
Sbjct: 67 KILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKANNYNEAVY 126
Query: 443 CLRFIADLVNCHVLAASSLLTL*RH**ILLMKMEYLTSEGIGLYLAVLSALPWVGREXYX 622
+RF++DLVNCHV+AA S++ + + + + + A LS+LPWVG+E Y
Sbjct: 127 LVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSLPWVGKELYE 186
Query: 623 KKXSQLDHLLVTIEGFLQ*TGVRNIGPXLKXVGPADSPPLXEGY 754
KK +++D + E +L+ ++ P L+ V AD P E Y
Sbjct: 187 KKDAEMDRIFANTESYLKRRQKTHV-PMLQ-VWTADKPHPQEEY 228
Score = 44.0 bits (99), Expect = 6e-04
Identities = 27/69 (39%), Positives = 35/69 (50%)
Frame = +3
Query: 60 MNRRRGHDDEEGYERLHRKRRRVSENQEIEDRLESLILRVGXXXXXXXXXXXXXXXXVLE 239
M+RRR D+ +G + KRR+ S+ E ED LESLI +VG VLE
Sbjct: 1 MSRRRHSDENDGGQP--HKRRKTSDANETEDHLESLICKVGEKSACSLESNLEGLAGVLE 58
Query: 240 ADLSTLELK 266
ADL + K
Sbjct: 59 ADLPNYKSK 67
>AL445531-3|CAI15431.1| 790|Homo sapiens nuclear cap binding
protein subunit 1, 80kDa protein.
Length = 790
Score = 134 bits (324), Expect = 3e-31
Identities = 71/164 (43%), Positives = 102/164 (62%)
Frame = +2
Query: 263 KILRILTDCAIRMPEKCTIYATLVGLLNAKNYNFGGEFVDYIVKTFKENLKVGKWNAARY 442
KILR+L A +PEK TIY TLVGLLNA+NYNFGGEFV+ +++ KE+LK +N A Y
Sbjct: 67 KILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKANNYNEAVY 126
Query: 443 CLRFIADLVNCHVLAASSLLTL*RH**ILLMKMEYLTSEGIGLYLAVLSALPWVGREXYX 622
+RF++DLVNCHV+AA S++ + + + + + A LS+LPWVG+E Y
Sbjct: 127 LVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSLPWVGKELYE 186
Query: 623 KKXSQLDHLLVTIEGFLQ*TGVRNIGPXLKXVGPADSPPLXEGY 754
KK +++D + E +L+ ++ P L+ V AD P E Y
Sbjct: 187 KKDAEMDRIFANTESYLKRRQKTHV-PMLQ-VWTADKPHPQEEY 228
Score = 44.0 bits (99), Expect = 6e-04
Identities = 27/69 (39%), Positives = 35/69 (50%)
Frame = +3
Query: 60 MNRRRGHDDEEGYERLHRKRRRVSENQEIEDRLESLILRVGXXXXXXXXXXXXXXXXVLE 239
M+RRR D+ +G + KRR+ S+ E ED LESLI +VG VLE
Sbjct: 1 MSRRRHSDENDGGQP--HKRRKTSDANETEDHLESLICKVGEKSACSLESNLEGLAGVLE 58
Query: 240 ADLSTLELK 266
ADL + K
Sbjct: 59 ADLPNYKSK 67
>AL162385-8|CAI12861.1| 790|Homo sapiens nuclear cap binding
protein subunit 1, 80kDa protein.
Length = 790
Score = 134 bits (324), Expect = 3e-31
Identities = 71/164 (43%), Positives = 102/164 (62%)
Frame = +2
Query: 263 KILRILTDCAIRMPEKCTIYATLVGLLNAKNYNFGGEFVDYIVKTFKENLKVGKWNAARY 442
KILR+L A +PEK TIY TLVGLLNA+NYNFGGEFV+ +++ KE+LK +N A Y
Sbjct: 67 KILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKANNYNEAVY 126
Query: 443 CLRFIADLVNCHVLAASSLLTL*RH**ILLMKMEYLTSEGIGLYLAVLSALPWVGREXYX 622
+RF++DLVNCHV+AA S++ + + + + + A LS+LPWVG+E Y
Sbjct: 127 LVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSLPWVGKELYE 186
Query: 623 KKXSQLDHLLVTIEGFLQ*TGVRNIGPXLKXVGPADSPPLXEGY 754
KK +++D + E +L+ ++ P L+ V AD P E Y
Sbjct: 187 KKDAEMDRIFANTESYLKRRQKTHV-PMLQ-VWTADKPHPQEEY 228
Score = 44.0 bits (99), Expect = 6e-04
Identities = 27/69 (39%), Positives = 35/69 (50%)
Frame = +3
Query: 60 MNRRRGHDDEEGYERLHRKRRRVSENQEIEDRLESLILRVGXXXXXXXXXXXXXXXXVLE 239
M+RRR D+ +G + KRR+ S+ E ED LESLI +VG VLE
Sbjct: 1 MSRRRHSDENDGGQP--HKRRKTSDANETEDHLESLICKVGEKSACSLESNLEGLAGVLE 58
Query: 240 ADLSTLELK 266
ADL + K
Sbjct: 59 ADLPNYKSK 67
>AB209233-1|BAD92470.1| 803|Homo sapiens nuclear cap binding
protein subunit 1, 80kDa variant protein.
Length = 803
Score = 134 bits (323), Expect = 5e-31
Identities = 71/164 (43%), Positives = 102/164 (62%)
Frame = +2
Query: 263 KILRILTDCAIRMPEKCTIYATLVGLLNAKNYNFGGEFVDYIVKTFKENLKVGKWNAARY 442
KILR+L A +PEK TIY TLVGLLNA+NYNFGGEFV+ +++ KE+LK +N A Y
Sbjct: 80 KILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKANNYNEAVY 139
Query: 443 CLRFIADLVNCHVLAASSLLTL*RH**ILLMKMEYLTSEGIGLYLAVLSALPWVGREXYX 622
+RF++DLVNCHV+AA S++ + + + + + A LS+LPWVG+E Y
Sbjct: 140 LVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEDDVPQVRRDWYVYAFLSSLPWVGKELYE 199
Query: 623 KKXSQLDHLLVTIEGFLQ*TGVRNIGPXLKXVGPADSPPLXEGY 754
KK +++D + E +L+ ++ P L+ V AD P E Y
Sbjct: 200 KKDAEMDRIFANTESYLKRRQKTHV-PMLQ-VWTADKPHPQEEY 241
Score = 44.0 bits (99), Expect = 6e-04
Identities = 27/69 (39%), Positives = 35/69 (50%)
Frame = +3
Query: 60 MNRRRGHDDEEGYERLHRKRRRVSENQEIEDRLESLILRVGXXXXXXXXXXXXXXXXVLE 239
M+RRR D+ +G + KRR+ S+ E ED LESLI +VG VLE
Sbjct: 14 MSRRRHSDENDGGQP--HKRRKTSDANETEDHLESLICKVGEKSACSLESNLEGLAGVLE 71
Query: 240 ADLSTLELK 266
ADL + K
Sbjct: 72 ADLPNYKSK 80
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,845,573
Number of Sequences: 237096
Number of extensions: 2044153
Number of successful extensions: 4380
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4362
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9813323168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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