Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0096.Seq
(713 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 22 4.3
AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein p... 22 4.3
AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein p... 22 4.3
X97819-1|CAA66399.1| 251|Tribolium castaneum ZEN Tc protein. 22 5.7
AF321227-4|AAK16424.1| 246|Tribolium castaneum Zen protein. 22 5.7
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 22 5.7
AF017414-1|AAB70260.1| 209|Tribolium castaneum abdominal-AII pr... 22 5.7
AY052622-1|AAL15470.1| 290|Tribolium castaneum kynurenine 3-mon... 21 9.9
AY052393-1|AAL15467.1| 445|Tribolium castaneum kynurenine 3-mon... 21 9.9
AY052391-1|AAL15465.1| 445|Tribolium castaneum kynurenine 3-mon... 21 9.9
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 21 9.9
AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 ... 21 9.9
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 22.2 bits (45), Expect = 4.3
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3
Query: 270 LVHRLVSIPTVRPVRPT 220
++H L S+P +PV PT
Sbjct: 180 VMHNLSSVPQPQPVLPT 196
>AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein
protein.
Length = 210
Score = 22.2 bits (45), Expect = 4.3
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3
Query: 270 LVHRLVSIPTVRPVRPT 220
++H L S+P +PV PT
Sbjct: 180 VMHNLSSVPQPQPVLPT 196
>AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein
protein.
Length = 253
Score = 22.2 bits (45), Expect = 4.3
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3
Query: 270 LVHRLVSIPTVRPVRPT 220
++H L S+P +PV PT
Sbjct: 180 VMHNLSSVPQPQPVLPT 196
>X97819-1|CAA66399.1| 251|Tribolium castaneum ZEN Tc protein.
Length = 251
Score = 21.8 bits (44), Expect = 5.7
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -1
Query: 359 DRXLDHAPLXSGN 321
DR L HAP+ S N
Sbjct: 183 DRLLSHAPIDSAN 195
>AF321227-4|AAK16424.1| 246|Tribolium castaneum Zen protein.
Length = 246
Score = 21.8 bits (44), Expect = 5.7
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -1
Query: 359 DRXLDHAPLXSGN 321
DR L HAP+ S N
Sbjct: 174 DRLLSHAPIDSAN 186
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 21.8 bits (44), Expect = 5.7
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 51 HQNQHFQNVYLETFTNAHTPYSTS 122
HQ H Q ++ T A YS+S
Sbjct: 15 HQQFHHQQLFQSATTEAPAAYSSS 38
>AF017414-1|AAB70260.1| 209|Tribolium castaneum abdominal-AII
protein.
Length = 209
Score = 21.8 bits (44), Expect = 5.7
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 51 HQNQHFQNVYLETFTNAHTPYSTS 122
HQ H Q ++ T A YS+S
Sbjct: 15 HQQFHHQQLFQSATTEAPAAYSSS 38
>AY052622-1|AAL15470.1| 290|Tribolium castaneum kynurenine
3-monooxygenase protein.
Length = 290
Score = 21.0 bits (42), Expect = 9.9
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +1
Query: 259 TVHKGDTMASKTGAWSTAR 315
T H+ D + GA+ST R
Sbjct: 156 TTHQADLIIEADGAYSTLR 174
>AY052393-1|AAL15467.1| 445|Tribolium castaneum kynurenine
3-monooxygenase protein.
Length = 445
Score = 21.0 bits (42), Expect = 9.9
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +1
Query: 259 TVHKGDTMASKTGAWSTAR 315
T H+ D + GA+ST R
Sbjct: 156 TTHQADLIIEADGAYSTLR 174
>AY052391-1|AAL15465.1| 445|Tribolium castaneum kynurenine
3-monooxygenase protein.
Length = 445
Score = 21.0 bits (42), Expect = 9.9
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +1
Query: 259 TVHKGDTMASKTGAWSTAR 315
T H+ D + GA+ST R
Sbjct: 156 TTHQADLIIEADGAYSTLR 174
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 21.0 bits (42), Expect = 9.9
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -1
Query: 203 SQPCGRMPPCGRSPSVP 153
S P G +PP SP P
Sbjct: 108 SSPSGNVPPLTPSPGPP 124
>AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1
protein protein.
Length = 371
Score = 21.0 bits (42), Expect = 9.9
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = +3
Query: 360 RTVPHGPVQGPQXXXXPXLG 419
+T PHGP P LG
Sbjct: 69 QTAPHGPPYAPHPSLSSGLG 88
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,266
Number of Sequences: 336
Number of extensions: 2724
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -