Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0096.Seq
         (713 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70756-10|CAI46587.1|  228|Caenorhabditis elegans Hypothetical p...    33   0.27 
AF101309-2|AAL32230.1| 1601|Caenorhabditis elegans Hypothetical ...    29   3.3  
AF101309-1|AAL32229.1| 1680|Caenorhabditis elegans Hypothetical ...    29   3.3  
U51997-1|AAG24067.1|  572|Caenorhabditis elegans Activated in bl...    28   7.6  

>Z70756-10|CAI46587.1|  228|Caenorhabditis elegans Hypothetical
           protein T06E4.12 protein.
          Length = 228

 Score = 32.7 bits (71), Expect = 0.27
 Identities = 23/64 (35%), Positives = 27/64 (42%)
 Frame = -2

Query: 316 PVLWTMPPFWKP*CPPCAPSRLDPDRAPRAPHGGHLLGPSPVGACRRVAGAPPYRSVPPV 137
           PVL    PF  P  PP AP  +    APR         P+P+ A R V  AP   +  P 
Sbjct: 103 PVLAAPAPFLAPPVPPVAP--IVSAFAPRPVLAAPAFAPAPILAPRPVLAAPAIPAFAPA 160

Query: 136 ERLA 125
             LA
Sbjct: 161 PLLA 164


>AF101309-2|AAL32230.1| 1601|Caenorhabditis elegans Hypothetical
           protein H24G06.1b protein.
          Length = 1601

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -2

Query: 226 PHGGHLLGPSPVGACRRVAGAPPYRSVPPVER 131
           P+GGHL+G S        + +P  +S P VER
Sbjct: 822 PNGGHLIGDSSYARVGDSSFSPAVQSAPAVER 853


>AF101309-1|AAL32229.1| 1680|Caenorhabditis elegans Hypothetical
           protein H24G06.1a protein.
          Length = 1680

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -2

Query: 226 PHGGHLLGPSPVGACRRVAGAPPYRSVPPVER 131
           P+GGHL+G S        + +P  +S P VER
Sbjct: 822 PNGGHLIGDSSYARVGDSSFSPAVQSAPAVER 853


>U51997-1|AAG24067.1|  572|Caenorhabditis elegans Activated in
           blocked unfolded proteinresponse protein 2 protein.
          Length = 572

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 21/60 (35%), Positives = 23/60 (38%), Gaps = 2/60 (3%)
 Frame = -1

Query: 299 APVLEAIVSPLCTVXXXXXXXXXXXXXXSFA--WSQPCGRMPPCGRSPSVPQCTPCGASC 126
           APV E   + LC                 FA    Q C   P C + PS PQC  C ASC
Sbjct: 393 APVCEQQCASLCHQPSAPQCQQCQNTCQQFAPVCEQQCA--PQCYQ-PSAPQCQQCQASC 449


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,617,402
Number of Sequences: 27780
Number of extensions: 257444
Number of successful extensions: 711
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 708
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)