Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0059.Seq
(299 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00033-12|AAC48297.2| 88|Caenorhabditis elegans Ribosomal prot... 89 5e-19
Z73103-3|CAA97423.1| 540|Caenorhabditis elegans Hypothetical pr... 27 3.3
AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin for... 27 3.3
AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin for... 27 3.3
AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protei... 27 3.3
AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protei... 27 3.3
Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical pr... 26 4.4
Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical pr... 26 4.4
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr... 25 7.6
U97002-11|AAY86259.1| 121|Caenorhabditis elegans Hypothetical p... 25 7.6
>U00033-12|AAC48297.2| 88|Caenorhabditis elegans Ribosomal
protein, small subunitprotein 21 protein.
Length = 88
Score = 89.0 bits (211), Expect = 5e-19
Identities = 42/74 (56%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Frame = +3
Query: 3 DLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGR-AADTSKMYVVCGAIRXMGESDDC 179
+LY PRKCS+SNR+I KDHASVQ+ DVDP TGR S Y +CGAIR MGESDD
Sbjct: 10 ELYVPRKCSSSNRIIGPKDHASVQIDFVDVDPETGRMIPGKSTRYAICGAIRRMGESDDA 69
Query: 180 IVRLTKXXGXLAKN 221
I+RL + G + ++
Sbjct: 70 ILRLAQKDGLVPRD 83
>Z73103-3|CAA97423.1| 540|Caenorhabditis elegans Hypothetical
protein C08F8.4 protein.
Length = 540
Score = 26.6 bits (56), Expect = 3.3
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = -2
Query: 61 WSLAWMRRLLAEHFLGQYKS 2
W++AW+RR++ E G Y++
Sbjct: 359 WTVAWLRRVVYERVEGPYRT 378
>AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin form A
protein.
Length = 4280
Score = 26.6 bits (56), Expect = 3.3
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Frame = -2
Query: 160 IXRIAPQTTYILDVSAA--RPVAGSTSAI--TSCTEAWSLAWMRRLLAE 26
I + P+TTY + VSAA + + G T+A+ T +L+ R++AE
Sbjct: 1677 IDNLRPRTTYNVTVSAATHKEMCGGTAAVMTTDAAALTALSTAPRVIAE 1725
>AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin form B
protein.
Length = 4450
Score = 26.6 bits (56), Expect = 3.3
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Frame = -2
Query: 160 IXRIAPQTTYILDVSAA--RPVAGSTSAI--TSCTEAWSLAWMRRLLAE 26
I + P+TTY + VSAA + + G T+A+ T +L+ R++AE
Sbjct: 1677 IDNLRPRTTYNVTVSAATHKEMCGGTAAVMTTDAAALTALSTAPRVIAE 1725
>AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protein
805, isoform b protein.
Length = 4450
Score = 26.6 bits (56), Expect = 3.3
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Frame = -2
Query: 160 IXRIAPQTTYILDVSAA--RPVAGSTSAI--TSCTEAWSLAWMRRLLAE 26
I + P+TTY + VSAA + + G T+A+ T +L+ R++AE
Sbjct: 1677 IDNLRPRTTYNVTVSAATHKEMCGGTAAVMTTDAAALTALSTAPRVIAE 1725
>AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protein
805, isoform a protein.
Length = 4280
Score = 26.6 bits (56), Expect = 3.3
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Frame = -2
Query: 160 IXRIAPQTTYILDVSAA--RPVAGSTSAI--TSCTEAWSLAWMRRLLAE 26
I + P+TTY + VSAA + + G T+A+ T +L+ R++AE
Sbjct: 1677 IDNLRPRTTYNVTVSAATHKEMCGGTAAVMTTDAAALTALSTAPRVIAE 1725
>Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical protein
ZC116.3 protein.
Length = 3871
Score = 26.2 bits (55), Expect = 4.4
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -1
Query: 173 IRLSHXSDSPTDNIHFRCVSSTTCGGVYVSNH 78
+RL+ +DS T FR CG +Y NH
Sbjct: 3100 VRLNFTTDSQTTARGFRVNWEAECGAIYRLNH 3131
>Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical protein
ZC116.3 protein.
Length = 3871
Score = 26.2 bits (55), Expect = 4.4
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -1
Query: 173 IRLSHXSDSPTDNIHFRCVSSTTCGGVYVSNH 78
+RL+ +DS T FR CG +Y NH
Sbjct: 3100 VRLNFTTDSQTTARGFRVNWEAECGAIYRLNH 3131
>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical protein
T01D3.7 protein.
Length = 2882
Score = 25.4 bits (53), Expect = 7.6
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = -2
Query: 175 SSDSPIXRIAPQTTYILDVSAARPVAGSTSAITSCTEAWSLA 50
++ P R+ P TT I D +G+TS ++ T + +++
Sbjct: 2472 TTTQPTSRVTPDTTRITDFYTRTTSSGTTSETSTSTSSQTVS 2513
>U97002-11|AAY86259.1| 121|Caenorhabditis elegans Hypothetical
protein K09H11.11 protein.
Length = 121
Score = 25.4 bits (53), Expect = 7.6
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2
Query: 29 GQQPPHPR*GPCF 67
GQQPPHP+ P F
Sbjct: 19 GQQPPHPQIDPLF 31
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,579,811
Number of Sequences: 27780
Number of extensions: 78880
Number of successful extensions: 194
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 193
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 313072342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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