Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0056.Seq
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   7.3  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   9.7  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   9.7  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   9.7  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   9.7  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   9.7  
AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax pr...    21   9.7  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   9.7  

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 129 RPSHPIPFSFIPVD 88
           +PS  I FS IPVD
Sbjct: 418 KPSFVIQFSHIPVD 431


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +2

Query: 131 TMYVIPFSMGPXGSP 175
           +M ++P+ M P G P
Sbjct: 283 SMNIVPYHMSPYGHP 297


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +2

Query: 131 TMYVIPFSMGPXGSP 175
           +M ++P+ M P G P
Sbjct: 283 SMNIVPYHMSPYGHP 297


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +2

Query: 131 TMYVIPFSMGPXGSP 175
           +M ++P+ M P G P
Sbjct: 283 SMNIVPYHMSPYGHP 297


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +2

Query: 131 TMYVIPFSMGPXGSP 175
           +M ++P+ M P G P
Sbjct: 239 SMNIVPYHMSPYGHP 253


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +2

Query: 131 TMYVIPFSMGPXGSP 175
           +M ++P+ M P G P
Sbjct: 283 SMNIVPYHMSPYGHP 297


>AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax
           protein.
          Length = 100

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +2

Query: 131 TMYVIPFSMGPXGSP 175
           +M ++P+ M P G P
Sbjct: 71  SMNIVPYHMSPYGHP 85


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +2

Query: 131 TMYVIPFSMGPXGSP 175
           +M ++P+ M P G P
Sbjct: 283 SMNIVPYHMSPYGHP 297


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,173
Number of Sequences: 336
Number of extensions: 2579
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)