Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0056.Seq
(698 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L12760-1|AAA02558.1| 622|Homo sapiens phosphoenolpyruvate carbo... 82 2e-15
L05144-1|AAA60084.1| 622|Homo sapiens phosphoenolpyruvate carbo... 82 2e-15
BC023978-1|AAH23978.1| 622|Homo sapiens phosphoenolpyruvate car... 82 2e-15
AY794987-1|AAV50001.1| 622|Homo sapiens phosphoenolpyruvate car... 82 2e-15
AL035541-3|CAB55863.1| 622|Homo sapiens phosphoenolpyruvate car... 82 2e-15
Y11484-1|CAA72272.1| 640|Homo sapiens phosphoenolpyruvate carbo... 77 8e-14
X92720-1|CAA63380.1| 640|Homo sapiens phosphoenolpyruvate carbo... 77 8e-14
CR456913-1|CAG33194.1| 640|Homo sapiens PCK2 protein. 77 8e-14
BC001454-1|AAH01454.1| 640|Homo sapiens phosphoenolpyruvate car... 77 8e-14
M64283-1|AAA52699.1| 453|Homo sapiens heparan sulfate proteogly... 32 2.3
X62515-1|CAA44373.1| 4393|Homo sapiens Human basement membrane h... 30 9.1
M85289-1|AAA52700.1| 4391|Homo sapiens heparan sulfate proteogly... 30 9.1
BC117134-1|AAI17135.1| 1709|Homo sapiens chromodomain helicase D... 30 9.1
AL590556-2|CAH71870.1| 4391|Homo sapiens heparan sulfate proteog... 30 9.1
AL590103-2|CAI12125.1| 4391|Homo sapiens heparan sulfate proteog... 30 9.1
AL445795-1|CAC18534.1| 4370|Homo sapiens heparan sulfate proteog... 30 9.1
AF006513-1|AAB87381.1| 1709|Homo sapiens CHD1 protein. 30 9.1
>L12760-1|AAA02558.1| 622|Homo sapiens phosphoenolpyruvate
carboxykinase protein.
Length = 622
Score = 82.2 bits (194), Expect = 2e-15
Identities = 36/42 (85%), Positives = 40/42 (95%)
Frame = +2
Query: 125 GRTMYVIPFSMGPXGSPLSKIGVEITDSPYVVYSMRVMTRIG 250
GRTMYVIPFSMGP GSPLSKIG+E+TDSPYVV SMR+MTR+G
Sbjct: 136 GRTMYVIPFSMGPLGSPLSKIGIELTDSPYVVASMRIMTRMG 177
Score = 53.6 bits (123), Expect = 6e-07
Identities = 27/69 (39%), Positives = 39/69 (56%)
Frame = +3
Query: 423 VGQEVLRLRLGSVIARREGWLAEXMXIVG*PTLKVRSATSLPXXLAXCGKTNLAIMTPTL 602
+G++ LR S +A+ EGWLAE M I+G + + CGK+NLA+M P+L
Sbjct: 241 LGKKCFALRNASRLAKEEGWLAEHMLILGITNPEGEKKYLAAAFPSACGKSNLAMMNPSL 300
Query: 603 PGYKXXAWG 629
PG+K G
Sbjct: 301 PGWKVECVG 309
Score = 51.6 bits (118), Expect = 3e-06
Identities = 33/83 (39%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Frame = +1
Query: 256 VLEILRQDEQFVRCLHAVGSG---GTP---GWPCDPKNTIILHXPAXXXXXXXXXXXXXN 417
VLE L D +FV+CLH+VG P WPC+P+ T+I H P N
Sbjct: 180 VLEALG-DGEFVKCLHSVGCPLPLQKPLVNNWPCNPELTLIAHLPDRREIISFGSGYGGN 238
Query: 418 SLLGKKCFVYVWXQ*SLVAKDGW 486
SLLGKKCF + L ++GW
Sbjct: 239 SLLGKKCFA-LRNASRLAKEEGW 260
>L05144-1|AAA60084.1| 622|Homo sapiens phosphoenolpyruvate
carboxykinase protein.
Length = 622
Score = 82.2 bits (194), Expect = 2e-15
Identities = 36/42 (85%), Positives = 40/42 (95%)
Frame = +2
Query: 125 GRTMYVIPFSMGPXGSPLSKIGVEITDSPYVVYSMRVMTRIG 250
GRTMYVIPFSMGP GSPLSKIG+E+TDSPYVV SMR+MTR+G
Sbjct: 136 GRTMYVIPFSMGPLGSPLSKIGIELTDSPYVVASMRIMTRMG 177
Score = 56.4 bits (130), Expect = 9e-08
Identities = 28/69 (40%), Positives = 39/69 (56%)
Frame = +3
Query: 423 VGQEVLRLRLGSVIARREGWLAEXMXIVG*PTLKVRSATSLPXXLAXCGKTNLAIMTPTL 602
+G++ LR+ S +A EGWLAE M I+G + + CGKTNLA+M P+L
Sbjct: 241 LGKKCFALRMASRLAEEEGWLAEHMLILGITNPEGEKKYLAAAFPSACGKTNLAMMNPSL 300
Query: 603 PGYKXXAWG 629
PG+K G
Sbjct: 301 PGWKVECVG 309
Score = 52.4 bits (120), Expect = 1e-06
Identities = 33/83 (39%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Frame = +1
Query: 256 VLEILRQDEQFVRCLHAVGSG---GTP---GWPCDPKNTIILHXPAXXXXXXXXXXXXXN 417
VLE L D +FV+CLH+VG P WPC+P+ T+I H P N
Sbjct: 180 VLEALG-DGEFVKCLHSVGCPLPLQKPLVNNWPCNPELTLIAHLPDRREIISFGSGYGGN 238
Query: 418 SLLGKKCFVYVWXQ*SLVAKDGW 486
SLLGKKCF L ++GW
Sbjct: 239 SLLGKKCFALRMAS-RLAEEEGW 260
>BC023978-1|AAH23978.1| 622|Homo sapiens phosphoenolpyruvate
carboxykinase 1 (soluble) protein.
Length = 622
Score = 82.2 bits (194), Expect = 2e-15
Identities = 36/42 (85%), Positives = 40/42 (95%)
Frame = +2
Query: 125 GRTMYVIPFSMGPXGSPLSKIGVEITDSPYVVYSMRVMTRIG 250
GRTMYVIPFSMGP GSPLSKIG+E+TDSPYVV SMR+MTR+G
Sbjct: 136 GRTMYVIPFSMGPLGSPLSKIGIELTDSPYVVASMRIMTRMG 177
Score = 56.8 bits (131), Expect = 7e-08
Identities = 27/69 (39%), Positives = 40/69 (57%)
Frame = +3
Query: 423 VGQEVLRLRLGSVIARREGWLAEXMXIVG*PTLKVRSATSLPXXLAXCGKTNLAIMTPTL 602
+G++ LR+ S +A+ EGWLAE M ++G + + CGKTNLA+M P+L
Sbjct: 241 LGKKCFALRMASRLAKEEGWLAEHMLVLGITNPEGEKKYLAAAFPSACGKTNLAMMNPSL 300
Query: 603 PGYKXXAWG 629
PG+K G
Sbjct: 301 PGWKVECVG 309
Score = 52.4 bits (120), Expect = 1e-06
Identities = 33/83 (39%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Frame = +1
Query: 256 VLEILRQDEQFVRCLHAVGSG---GTP---GWPCDPKNTIILHXPAXXXXXXXXXXXXXN 417
VLE L D +FV+CLH+VG P WPC+P+ T+I H P N
Sbjct: 180 VLEALG-DGEFVKCLHSVGCPLPLQKPLVNNWPCNPELTLIAHLPDRREIISFGSGYGGN 238
Query: 418 SLLGKKCFVYVWXQ*SLVAKDGW 486
SLLGKKCF L ++GW
Sbjct: 239 SLLGKKCFALRMAS-RLAKEEGW 260
>AY794987-1|AAV50001.1| 622|Homo sapiens phosphoenolpyruvate
carboxykinase 1 (soluble) protein.
Length = 622
Score = 82.2 bits (194), Expect = 2e-15
Identities = 36/42 (85%), Positives = 40/42 (95%)
Frame = +2
Query: 125 GRTMYVIPFSMGPXGSPLSKIGVEITDSPYVVYSMRVMTRIG 250
GRTMYVIPFSMGP GSPLSKIG+E+TDSPYVV SMR+MTR+G
Sbjct: 136 GRTMYVIPFSMGPLGSPLSKIGIELTDSPYVVASMRIMTRMG 177
Score = 57.2 bits (132), Expect = 5e-08
Identities = 28/69 (40%), Positives = 40/69 (57%)
Frame = +3
Query: 423 VGQEVLRLRLGSVIARREGWLAEXMXIVG*PTLKVRSATSLPXXLAXCGKTNLAIMTPTL 602
+G++ LR+ S +A+ EGWLAE M I+G + + CGKTNLA+M P+L
Sbjct: 241 LGKKCFALRMASRLAKEEGWLAEHMLILGITNPEGEKKYLAAAFPSACGKTNLAMMNPSL 300
Query: 603 PGYKXXAWG 629
PG+K G
Sbjct: 301 PGWKVECVG 309
Score = 52.4 bits (120), Expect = 1e-06
Identities = 33/83 (39%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Frame = +1
Query: 256 VLEILRQDEQFVRCLHAVGSG---GTP---GWPCDPKNTIILHXPAXXXXXXXXXXXXXN 417
VLE L D +FV+CLH+VG P WPC+P+ T+I H P N
Sbjct: 180 VLEALG-DGEFVKCLHSVGCPLPLQKPLVNNWPCNPELTLIAHLPDRREIISFGSGYGGN 238
Query: 418 SLLGKKCFVYVWXQ*SLVAKDGW 486
SLLGKKCF L ++GW
Sbjct: 239 SLLGKKCFALRMAS-RLAKEEGW 260
>AL035541-3|CAB55863.1| 622|Homo sapiens phosphoenolpyruvate
carboxykinase 1 (soluble) protein.
Length = 622
Score = 82.2 bits (194), Expect = 2e-15
Identities = 36/42 (85%), Positives = 40/42 (95%)
Frame = +2
Query: 125 GRTMYVIPFSMGPXGSPLSKIGVEITDSPYVVYSMRVMTRIG 250
GRTMYVIPFSMGP GSPLSKIG+E+TDSPYVV SMR+MTR+G
Sbjct: 136 GRTMYVIPFSMGPLGSPLSKIGIELTDSPYVVASMRIMTRMG 177
Score = 57.2 bits (132), Expect = 5e-08
Identities = 28/69 (40%), Positives = 40/69 (57%)
Frame = +3
Query: 423 VGQEVLRLRLGSVIARREGWLAEXMXIVG*PTLKVRSATSLPXXLAXCGKTNLAIMTPTL 602
+G++ LR+ S +A+ EGWLAE M I+G + + CGKTNLA+M P+L
Sbjct: 241 LGKKCFALRMASRLAKEEGWLAEHMLILGITNPEGEKKYLAAAFPSACGKTNLAMMNPSL 300
Query: 603 PGYKXXAWG 629
PG+K G
Sbjct: 301 PGWKVECVG 309
Score = 51.2 bits (117), Expect = 3e-06
Identities = 29/76 (38%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Frame = +1
Query: 277 DEQFVRCLHAVGSG---GTP---GWPCDPKNTIILHXPAXXXXXXXXXXXXXNSLLGKKC 438
D +FV+CLH+VG P WPC+P+ T+I H P NSLLGKKC
Sbjct: 186 DGEFVKCLHSVGCPLPLQKPLVNNWPCNPELTLIAHLPDRREIISFGSGYGGNSLLGKKC 245
Query: 439 FVYVWXQ*SLVAKDGW 486
F L ++GW
Sbjct: 246 FALRMAS-RLAKEEGW 260
>Y11484-1|CAA72272.1| 640|Homo sapiens phosphoenolpyruvate
carboxykinase (GTP) protein.
Length = 640
Score = 76.6 bits (180), Expect = 8e-14
Identities = 33/42 (78%), Positives = 39/42 (92%)
Frame = +2
Query: 125 GRTMYVIPFSMGPXGSPLSKIGVEITDSPYVVYSMRVMTRIG 250
GRTMYV+PFSMGP GSPLS+IGV++TDS YVV SMR+MTR+G
Sbjct: 154 GRTMYVLPFSMGPVGSPLSRIGVQLTDSAYVVASMRIMTRLG 195
Score = 60.1 bits (139), Expect = 7e-09
Identities = 30/69 (43%), Positives = 41/69 (59%)
Frame = +3
Query: 423 VGQEVLRLRLGSVIARREGWLAEXMXIVG*PTLKVRSATSLPXXLAXCGKTNLAIMTPTL 602
+G++ LR+ S +AR EGWLAE M I+G + + A + CGKTNLA+M P L
Sbjct: 259 LGKKCFALRIASRLARDEGWLAEHMLILGITSPAGKKALCAAAFPSACGKTNLAMMRPAL 318
Query: 603 PGYKXXAWG 629
PG+K G
Sbjct: 319 PGWKVECVG 327
Score = 53.6 bits (123), Expect = 6e-07
Identities = 41/121 (33%), Positives = 52/121 (42%), Gaps = 8/121 (6%)
Frame = +1
Query: 277 DEQFVRCLHAVGSG----GTP--GWPCDPKNTIILHXPAXXXXXXXXXXXXXNSLLGKKC 438
D FV+CLH+VG G P WPC+P+ T+I H P NSLLGKKC
Sbjct: 204 DGDFVKCLHSVGQPLTGQGEPVSQWPCNPEKTLIGHVPDQREIISFGSGYGGNSLLGKKC 263
Query: 439 FVYVWXQ*SLVAKDGW--PNXCXSSDNQPSR*EALHRCRFXWXLAGKRTLPL*RQHCPGT 612
F + L +GW + P+ +AL F GK L + R PG
Sbjct: 264 FA-LRIASRLARDEGWLAEHMLILGITSPAGKKALCAAAFP-SACGKTNLAMMRPALPGW 321
Query: 613 K 615
K
Sbjct: 322 K 322
>X92720-1|CAA63380.1| 640|Homo sapiens phosphoenolpyruvate
carboxykinase (GTP) protein.
Length = 640
Score = 76.6 bits (180), Expect = 8e-14
Identities = 33/42 (78%), Positives = 39/42 (92%)
Frame = +2
Query: 125 GRTMYVIPFSMGPXGSPLSKIGVEITDSPYVVYSMRVMTRIG 250
GRTMYV+PFSMGP GSPLS+IGV++TDS YVV SMR+MTR+G
Sbjct: 154 GRTMYVLPFSMGPVGSPLSRIGVQLTDSAYVVASMRIMTRLG 195
Score = 60.1 bits (139), Expect = 7e-09
Identities = 30/69 (43%), Positives = 41/69 (59%)
Frame = +3
Query: 423 VGQEVLRLRLGSVIARREGWLAEXMXIVG*PTLKVRSATSLPXXLAXCGKTNLAIMTPTL 602
+G++ LR+ S +AR EGWLAE M I+G + + A + CGKTNLA+M P L
Sbjct: 259 LGKKCFALRIASRLARDEGWLAEHMLILGITSPAGKKALCAAAFPSACGKTNLAMMRPAL 318
Query: 603 PGYKXXAWG 629
PG+K G
Sbjct: 319 PGWKVECVG 327
Score = 53.6 bits (123), Expect = 6e-07
Identities = 41/121 (33%), Positives = 52/121 (42%), Gaps = 8/121 (6%)
Frame = +1
Query: 277 DEQFVRCLHAVGSG----GTP--GWPCDPKNTIILHXPAXXXXXXXXXXXXXNSLLGKKC 438
D FV+CLH+VG G P WPC+P+ T+I H P NSLLGKKC
Sbjct: 204 DGDFVKCLHSVGQPLTGQGEPVSQWPCNPEKTLIGHVPDQREIISFGSGYGGNSLLGKKC 263
Query: 439 FVYVWXQ*SLVAKDGW--PNXCXSSDNQPSR*EALHRCRFXWXLAGKRTLPL*RQHCPGT 612
F + L +GW + P+ +AL F GK L + R PG
Sbjct: 264 FA-LRIASRLARDEGWLAEHMLILGITSPAGKKALCAAAFP-SACGKTNLAMMRPALPGW 321
Query: 613 K 615
K
Sbjct: 322 K 322
>CR456913-1|CAG33194.1| 640|Homo sapiens PCK2 protein.
Length = 640
Score = 76.6 bits (180), Expect = 8e-14
Identities = 33/42 (78%), Positives = 39/42 (92%)
Frame = +2
Query: 125 GRTMYVIPFSMGPXGSPLSKIGVEITDSPYVVYSMRVMTRIG 250
GRTMYV+PFSMGP GSPLS+IGV++TDS YVV SMR+MTR+G
Sbjct: 154 GRTMYVLPFSMGPVGSPLSRIGVQLTDSAYVVASMRIMTRLG 195
Score = 57.2 bits (132), Expect = 5e-08
Identities = 29/69 (42%), Positives = 40/69 (57%)
Frame = +3
Query: 423 VGQEVLRLRLGSVIARREGWLAEXMXIVG*PTLKVRSATSLPXXLAXCGKTNLAIMTPTL 602
+G++ LR+ S +AR EGWLAE M I+G + + + CGKTNLA+M P L
Sbjct: 259 LGKKCFALRIASRLARDEGWLAEHMLILGITSPAGKKRYVAAAFPSACGKTNLAMMRPAL 318
Query: 603 PGYKXXAWG 629
PG+K G
Sbjct: 319 PGWKVECVG 327
Score = 51.6 bits (118), Expect = 3e-06
Identities = 30/76 (39%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Frame = +1
Query: 277 DEQFVRCLHAVGSG----GTP--GWPCDPKNTIILHXPAXXXXXXXXXXXXXNSLLGKKC 438
D FV+CLH+VG G P WPC+P+ T+I H P NSLLGKKC
Sbjct: 204 DGDFVKCLHSVGQPLTGQGEPVSQWPCNPEKTLIGHVPDQREIISFGSGYGGNSLLGKKC 263
Query: 439 FVYVWXQ*SLVAKDGW 486
F + L +GW
Sbjct: 264 FA-LRIASRLARDEGW 278
>BC001454-1|AAH01454.1| 640|Homo sapiens phosphoenolpyruvate
carboxykinase 2 (mitochondrial) protein.
Length = 640
Score = 76.6 bits (180), Expect = 8e-14
Identities = 33/42 (78%), Positives = 39/42 (92%)
Frame = +2
Query: 125 GRTMYVIPFSMGPXGSPLSKIGVEITDSPYVVYSMRVMTRIG 250
GRTMYV+PFSMGP GSPLS+IGV++TDS YVV SMR+MTR+G
Sbjct: 154 GRTMYVLPFSMGPVGSPLSRIGVQLTDSAYVVASMRIMTRLG 195
Score = 57.2 bits (132), Expect = 5e-08
Identities = 29/69 (42%), Positives = 40/69 (57%)
Frame = +3
Query: 423 VGQEVLRLRLGSVIARREGWLAEXMXIVG*PTLKVRSATSLPXXLAXCGKTNLAIMTPTL 602
+G++ LR+ S +AR EGWLAE M I+G + + + CGKTNLA+M P L
Sbjct: 259 LGKKCFALRIASRLARDEGWLAEHMLILGITSPAGKKRYVAAAFPSACGKTNLAMMRPAL 318
Query: 603 PGYKXXAWG 629
PG+K G
Sbjct: 319 PGWKVECVG 327
Score = 51.6 bits (118), Expect = 3e-06
Identities = 30/76 (39%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Frame = +1
Query: 277 DEQFVRCLHAVGSG----GTP--GWPCDPKNTIILHXPAXXXXXXXXXXXXXNSLLGKKC 438
D FV+CLH+VG G P WPC+P+ T+I H P NSLLGKKC
Sbjct: 204 DGDFVKCLHSVGQPLTGQGEPVSQWPCNPEKTLIGHVPDQREIISFGSGYGGNSLLGKKC 263
Query: 439 FVYVWXQ*SLVAKDGW 486
F + L +GW
Sbjct: 264 FA-LRIASRLARDEGW 278
>M64283-1|AAA52699.1| 453|Homo sapiens heparan sulfate proteoglycan
protein.
Length = 453
Score = 31.9 bits (69), Expect = 2.3
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +2
Query: 95 GMKLNGMG*DGRTMYVIPFSMGPXGSPLSKIGVEIT 202
G K+ G G G+ Y + ++ GP GSPLS V+IT
Sbjct: 388 GGKVAGYG--GKLRYTLSYTAGPQGSPLSDPDVQIT 421
>X62515-1|CAA44373.1| 4393|Homo sapiens Human basement membrane
heparan sulfate proteoglycan core protein protein.
Length = 4393
Score = 29.9 bits (64), Expect = 9.1
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 125 GRTMYVIPFSMGPXGSPLSKIGVEIT 202
G+ Y + ++ GP GSPLS V+IT
Sbjct: 1415 GKLRYTLSYTAGPQGSPLSDPDVQIT 1440
>M85289-1|AAA52700.1| 4391|Homo sapiens heparan sulfate proteoglycan
protein.
Length = 4391
Score = 29.9 bits (64), Expect = 9.1
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 125 GRTMYVIPFSMGPXGSPLSKIGVEIT 202
G+ Y + ++ GP GSPLS V+IT
Sbjct: 1413 GKLRYTLSYTAGPQGSPLSDPDVQIT 1438
>BC117134-1|AAI17135.1| 1709|Homo sapiens chromodomain helicase DNA
binding protein 1 protein.
Length = 1709
Score = 29.9 bits (64), Expect = 9.1
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Frame = -2
Query: 310 RLREDNERTARLDVE-FLEPRSNS---SHDSHRINHVRRIRDFYADLRERRSXRTHREWY 143
+L + R R ++E L+ RS+S SH HR++ R Y + R R H +W
Sbjct: 1606 KLDDHRSRDHRSNLEGSLKDRSHSDHRSHSDHRLHSDHRSSSEYTHHKSSRDYRYHSDWQ 1665
Query: 142 HVHCA 128
H A
Sbjct: 1666 MDHRA 1670
>AL590556-2|CAH71870.1| 4391|Homo sapiens heparan sulfate proteoglycan
2 protein.
Length = 4391
Score = 29.9 bits (64), Expect = 9.1
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 125 GRTMYVIPFSMGPXGSPLSKIGVEIT 202
G+ Y + ++ GP GSPLS V+IT
Sbjct: 1413 GKLRYTLSYTAGPQGSPLSDPDVQIT 1438
>AL590103-2|CAI12125.1| 4391|Homo sapiens heparan sulfate proteoglycan
2 protein.
Length = 4391
Score = 29.9 bits (64), Expect = 9.1
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 125 GRTMYVIPFSMGPXGSPLSKIGVEIT 202
G+ Y + ++ GP GSPLS V+IT
Sbjct: 1413 GKLRYTLSYTAGPQGSPLSDPDVQIT 1438
>AL445795-1|CAC18534.1| 4370|Homo sapiens heparan sulfate proteoglycan
perlecan protein.
Length = 4370
Score = 29.9 bits (64), Expect = 9.1
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 125 GRTMYVIPFSMGPXGSPLSKIGVEIT 202
G+ Y + ++ GP GSPLS V+IT
Sbjct: 1392 GKLRYTLSYTAGPQGSPLSDPDVQIT 1417
>AF006513-1|AAB87381.1| 1709|Homo sapiens CHD1 protein.
Length = 1709
Score = 29.9 bits (64), Expect = 9.1
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Frame = -2
Query: 310 RLREDNERTARLDVE-FLEPRSNS---SHDSHRINHVRRIRDFYADLRERRSXRTHREWY 143
+L + R R ++E L+ RS+S SH HR++ R Y + R R H +W
Sbjct: 1606 KLDDHRSRDHRSNLEGSLKDRSHSDHRSHSDHRLHSDHRSSSEYTHHKSSRDYRYHSDWQ 1665
Query: 142 HVHCA 128
H A
Sbjct: 1666 MDHRA 1670
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,784,278
Number of Sequences: 237096
Number of extensions: 1702329
Number of successful extensions: 3137
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3110
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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