Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0050.Seq
         (669 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB7B53 Cluster: PREDICTED: similar to CG8086-PD,...    38   0.22 
UniRef50_Q3SX64-2 Cluster: Isoform 2 of Q3SX64 ; n=4; Eutheria|R...    38   0.29 
UniRef50_Q3SX64 Cluster: Uncharacterized protein C19orf19; n=6; ...    38   0.29 
UniRef50_UPI0000F2E986 Cluster: PREDICTED: similar to Outer dens...    33   6.2  
UniRef50_A2Z0K0 Cluster: Putative uncharacterized protein; n=4; ...    33   6.2  
UniRef50_A6NMM2 Cluster: Uncharacterized protein ODF3; n=3; Euth...    33   6.2  
UniRef50_Q568P2 Cluster: Zgc:110183; n=5; Euteleostomi|Rep: Zgc:...    33   8.2  
UniRef50_Q96PU9 Cluster: Outer dense fiber protein 3; n=19; Eute...    33   8.2  

>UniRef50_UPI0000DB7B53 Cluster: PREDICTED: similar to CG8086-PD,
           isoform D; n=1; Apis mellifera|Rep: PREDICTED: similar
           to CG8086-PD, isoform D - Apis mellifera
          Length = 627

 Score = 37.9 bits (84), Expect = 0.22
 Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
 Frame = +2

Query: 170 KKGVKQLAPAFSITGXXKFS-EXKXLMPG---REXIXPIXLQLHXRSVHLPSRWLLDEN* 337
           K+G K+ APA+SI+G  K S + + L+PG    E + P  +++   +  + +R+ L +  
Sbjct: 528 KEGNKKTAPAYSISGRQKDSTDDRILVPGPGTYEAVKPDSVRIKSPAYSISARYQLPD-- 585

Query: 338 NHPLQRFPVPXCIVLXRFAXLCPGRRAHTFGIRNSPF 448
           +H   + P P      +     P   AH+FGIR+SP+
Sbjct: 586 DH--SQIPGPGAHCPEKVILDIP--PAHSFGIRHSPY 618



 Score = 37.5 bits (83), Expect = 0.29
 Identities = 17/51 (33%), Positives = 28/51 (54%)
 Frame = +1

Query: 253 PGTYXTDXXAAAXTKRPPAFTMAPRRELKPPTAAVPGXGXYCPXKVCVTLP 405
           PGTY      +   K P A++++ R +L    + +PG G +CP KV + +P
Sbjct: 557 PGTYEAVKPDSVRIKSP-AYSISARYQLPDDHSQIPGPGAHCPEKVILDIP 606



 Score = 33.5 bits (73), Expect = 4.7
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +1

Query: 13  PKPCDYEPNKAARAVLDHAPRF 78
           P P DY P KA + +LDH+P++
Sbjct: 101 PAPGDYNPEKAEKIILDHSPKY 122


>UniRef50_Q3SX64-2 Cluster: Isoform 2 of Q3SX64 ; n=4; Eutheria|Rep:
           Isoform 2 of Q3SX64 - Homo sapiens (Human)
          Length = 253

 Score = 37.5 bits (83), Expect = 0.29
 Identities = 21/54 (38%), Positives = 25/54 (46%)
 Frame = +1

Query: 253 PGTYXTDXXAAAXTKRPPAFTMAPRRELKPPTAAVPGXGXYCPXKVCVTLPWAP 414
           PG Y +   A    +R PAFTM  R     P    PG G +CP +V V    AP
Sbjct: 168 PGQYDSPD-ANTYRQRLPAFTMLGRPRAPRPLEETPGPGAHCPEQVTVNKARAP 220


>UniRef50_Q3SX64 Cluster: Uncharacterized protein C19orf19; n=6;
           Mammalia|Rep: Uncharacterized protein C19orf19 - Homo
           sapiens (Human)
          Length = 289

 Score = 37.5 bits (83), Expect = 0.29
 Identities = 21/54 (38%), Positives = 25/54 (46%)
 Frame = +1

Query: 253 PGTYXTDXXAAAXTKRPPAFTMAPRRELKPPTAAVPGXGXYCPXKVCVTLPWAP 414
           PG Y +   A    +R PAFTM  R     P    PG G +CP +V V    AP
Sbjct: 204 PGQYDSPD-ANTYRQRLPAFTMLGRPRAPRPLEETPGPGAHCPEQVTVNKARAP 256


>UniRef50_UPI0000F2E986 Cluster: PREDICTED: similar to Outer dense
           fiber of sperm tails 3; n=1; Monodelphis domestica|Rep:
           PREDICTED: similar to Outer dense fiber of sperm tails 3
           - Monodelphis domestica
          Length = 258

 Score = 33.1 bits (72), Expect = 6.2
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +1

Query: 298 RPPAFTMAPRRELKPPTAAVPGXGXYCPXKVCVTLPWAP 414
           + P +TMA R E        PG G + P KV +T P AP
Sbjct: 200 KAPQYTMAARIEAVADKTLKPGPGAHSPEKVLMTKPSAP 238


>UniRef50_A2Z0K0 Cluster: Putative uncharacterized protein; n=4;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. indica (Rice)
          Length = 916

 Score = 33.1 bits (72), Expect = 6.2
 Identities = 20/65 (30%), Positives = 28/65 (43%)
 Frame = +1

Query: 295 KRPPAFTMAPRRELKPPTAAVPGXGXYCPXKVCVTLPWAPGTYIWNSKLSVRXAKQLTTQ 474
           K  PA   A   EL PP AA PG   YC      T    P T +++    +R A + +  
Sbjct: 529 KPTPAIASAESDELPPPAAAAPGQRGYCHYHT-TTASATPDTALFDPDNFMRLAMRQSPG 587

Query: 475 HLKGI 489
            + G+
Sbjct: 588 SVSGV 592


>UniRef50_A6NMM2 Cluster: Uncharacterized protein ODF3; n=3;
           Eutheria|Rep: Uncharacterized protein ODF3 - Homo
           sapiens (Human)
          Length = 253

 Score = 33.1 bits (72), Expect = 6.2
 Identities = 36/135 (26%), Positives = 49/135 (36%), Gaps = 1/135 (0%)
 Frame = +1

Query: 13  PKPCDYEPNKAARAVLDHAPRFQXVSV*AFPDRGVKLQHPILVLCHRYLVQAEEGSXTAG 192
           P P DY P K+ + V D AP    +S      R      P   +    +    +G   A 
Sbjct: 101 PGPGDYFPEKSTKYVFDSAPSHS-ISARTKAFRVDSTPGPAAYMLPMVMGPNTKGDALA- 158

Query: 193 TGFQYHRXXKVF*X*XINAWPGTYXTDXXAAAXTK-RPPAFTMAPRRELKPPTAAVPGXG 369
             +   R         ++  PG           TK + P +TMA R E        PG G
Sbjct: 159 PAWTVLRTRDGPLSHTLSDTPGPAAYRQTDVRVTKFKAPQYTMAARVEPPGDKTLKPGPG 218

Query: 370 XYCPXKVCVTLPWAP 414
            + P KV +T P AP
Sbjct: 219 AHSPEKVTLTKPCAP 233


>UniRef50_Q568P2 Cluster: Zgc:110183; n=5; Euteleostomi|Rep:
           Zgc:110183 - Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 254

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 18/54 (33%), Positives = 24/54 (44%)
 Frame = +1

Query: 253 PGTYXTDXXAAAXTKRPPAFTMAPRRELKPPTAAVPGXGXYCPXKVCVTLPWAP 414
           PG Y +   +     R P+F+M  R  +   +   PG G Y   KV   LP AP
Sbjct: 181 PGRYNSTDPSI-YLNRQPSFSMQSRHNILIDSTGKPGPGTYSSEKVTAHLPRAP 233


>UniRef50_Q96PU9 Cluster: Outer dense fiber protein 3; n=19;
           Euteleostomi|Rep: Outer dense fiber protein 3 - Homo
           sapiens (Human)
          Length = 254

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +1

Query: 298 RPPAFTMAPRRELKPPTAAVPGXGXYCPXKVCVTLPWAP 414
           + P +TMA R E        PG G + P KV +T P AP
Sbjct: 196 KAPQYTMAARVEPPGDKTLKPGPGAHSPEKVTLTKPCAP 234


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 556,661,657
Number of Sequences: 1657284
Number of extensions: 10047758
Number of successful extensions: 21930
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 21051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21922
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51239674196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)