Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0050.Seq
         (669 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC104469-1|AAI04470.1|  289|Homo sapiens chromosome 19 open read...    38   0.043
BC104468-1|AAI04469.1|  253|Homo sapiens C19orf19 protein protein.     38   0.043
AK097378-1|BAC05028.1|  289|Homo sapiens protein ( Homo sapiens ...    38   0.043
BC126248-1|AAI26249.1|  254|Homo sapiens outer dense fiber of sp...    33   1.2  
BC126222-1|AAI26223.1|  254|Homo sapiens outer dense fiber of sp...    33   1.2  
AY713299-1|AAW83203.1|  254|Homo sapiens TISP50 protein.               33   1.2  
AB067774-1|BAB70734.1|  254|Homo sapiens h-SHIPPO 1 protein.           33   1.2  

>BC104469-1|AAI04470.1|  289|Homo sapiens chromosome 19 open reading
           frame 19 protein.
          Length = 289

 Score = 37.5 bits (83), Expect = 0.043
 Identities = 21/54 (38%), Positives = 25/54 (46%)
 Frame = +1

Query: 253 PGTYXTDXXAAAXTKRPPAFTMAPRRELKPPTAAVPGXGXYCPXKVCVTLPWAP 414
           PG Y +   A    +R PAFTM  R     P    PG G +CP +V V    AP
Sbjct: 204 PGQYDSPD-ANTYRQRLPAFTMLGRPRAPRPLEETPGPGAHCPEQVTVNKARAP 256



 Score = 33.5 bits (73), Expect = 0.70
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = +1

Query: 253 PGTYXTDXXAAAXTKRPPAFTMAPRRELKPPTAAVPGXGXY 375
           PG Y  +    A  + PPAFT+  R  LKP   + P    Y
Sbjct: 124 PGAYSPEKVPPARHRTPPAFTLGCRLPLKPLDTSAPAPNAY 164


>BC104468-1|AAI04469.1|  253|Homo sapiens C19orf19 protein protein.
          Length = 253

 Score = 37.5 bits (83), Expect = 0.043
 Identities = 21/54 (38%), Positives = 25/54 (46%)
 Frame = +1

Query: 253 PGTYXTDXXAAAXTKRPPAFTMAPRRELKPPTAAVPGXGXYCPXKVCVTLPWAP 414
           PG Y +   A    +R PAFTM  R     P    PG G +CP +V V    AP
Sbjct: 168 PGQYDSPD-ANTYRQRLPAFTMLGRPRAPRPLEETPGPGAHCPEQVTVNKARAP 220



 Score = 33.5 bits (73), Expect = 0.70
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = +1

Query: 253 PGTYXTDXXAAAXTKRPPAFTMAPRRELKPPTAAVPGXGXY 375
           PG Y  +    A  + PPAFT+  R  LKP   + P    Y
Sbjct: 88  PGAYSPEKVPPARHRTPPAFTLGCRLPLKPLDTSAPAPNAY 128


>AK097378-1|BAC05028.1|  289|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40059 fis, clone TCOLN2000139. ).
          Length = 289

 Score = 37.5 bits (83), Expect = 0.043
 Identities = 21/54 (38%), Positives = 25/54 (46%)
 Frame = +1

Query: 253 PGTYXTDXXAAAXTKRPPAFTMAPRRELKPPTAAVPGXGXYCPXKVCVTLPWAP 414
           PG Y +   A    +R PAFTM  R     P    PG G +CP +V V    AP
Sbjct: 204 PGQYDSPD-ANTYRQRLPAFTMLGRPRAPRPLEETPGPGAHCPEQVTVNKARAP 256



 Score = 31.9 bits (69), Expect = 2.1
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = +1

Query: 253 PGTYXTDXXAAAXTKRPPAFTMAPRRELKPPTAAVPGXGXY 375
           PG Y  +       + PPAFT+  R  LKP   + P    Y
Sbjct: 124 PGAYSPEKVPPVRHRTPPAFTLGCRLPLKPLDTSAPAPNAY 164


>BC126248-1|AAI26249.1|  254|Homo sapiens outer dense fiber of sperm
           tails 3 protein.
          Length = 254

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +1

Query: 298 RPPAFTMAPRRELKPPTAAVPGXGXYCPXKVCVTLPWAP 414
           + P +TMA R E        PG G + P KV +T P AP
Sbjct: 196 KAPQYTMAARVEPPGDKTLKPGPGAHSPEKVTLTKPCAP 234


>BC126222-1|AAI26223.1|  254|Homo sapiens outer dense fiber of sperm
           tails 3 protein.
          Length = 254

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +1

Query: 298 RPPAFTMAPRRELKPPTAAVPGXGXYCPXKVCVTLPWAP 414
           + P +TMA R E        PG G + P KV +T P AP
Sbjct: 196 KAPQYTMAARVEPPGDKTLKPGPGAHSPEKVTLTKPCAP 234


>AY713299-1|AAW83203.1|  254|Homo sapiens TISP50 protein.
          Length = 254

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +1

Query: 298 RPPAFTMAPRRELKPPTAAVPGXGXYCPXKVCVTLPWAP 414
           + P +TMA R E        PG G + P KV +T P AP
Sbjct: 196 KAPQYTMAARVEPPGDKTLKPGPGAHSPEKVTLTKPCAP 234


>AB067774-1|BAB70734.1|  254|Homo sapiens h-SHIPPO 1 protein.
          Length = 254

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +1

Query: 298 RPPAFTMAPRRELKPPTAAVPGXGXYCPXKVCVTLPWAP 414
           + P +TMA R E        PG G + P KV +T P AP
Sbjct: 196 KAPQYTMAARVEPPGDKTLKPGPGAHSPEKVTLTKPCAP 234


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,160,224
Number of Sequences: 237096
Number of extensions: 1663028
Number of successful extensions: 3296
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3292
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7591280850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)